RNA–Protein interactions for RNA: ENST00000476791.1

SPTLC3-205, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 1 (best)

Gene SPTLC3, Length 2,480 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-205ENST00000476791 APCDD1LQ8NCL9 501 aa4.71□□□□□ -1.65
SPTLC3-205ENST00000476791 TBL1YQ9BQ87 522 aa4.71□□□□□ -1.65
SPTLC3-205ENST00000476791 SHANK2-AS3Q9BTD1 123 aa4.71□□□□□ -1.65
SPTLC3-205ENST00000476791 NAA60Q9H7X0 242 aa4.71□□□□□ -1.65
SPTLC3-205ENST00000476791 NEUROG3Q9Y4Z2 214 aa4.71□□□□□ -1.65
SPTLC3-205ENST00000476791 NUMA1Q14980 2115 aa4.71□□□□□ -1.66
SPTLC3-205ENST00000476791 PHF3Q92576 2039 aaKnown RBP4.71□□□□□ -1.66
SPTLC3-205ENST00000476791 SOD1P00441 154 aa4.71□□□□□ -1.66
SPTLC3-205ENST00000476791 TRACP01848 142 aa4.71□□□□□ -1.66
SPTLC3-205ENST00000476791 APOC2P02655 101 aa4.71□□□□□ -1.66
SPTLC3-205ENST00000476791 CD7P09564 240 aa4.71□□□□□ -1.66
SPTLC3-205ENST00000476791 RBMY1CP0DJD4 496 aa4.71□□□□□ -1.66
SPTLC3-205ENST00000476791 P0DMU3 169 aa4.71□□□□□ -1.66
SPTLC3-205ENST00000476791 FAM231AP0DMU4 169 aa4.71□□□□□ -1.66
SPTLC3-205ENST00000476791 FAM231CP0DMU5 169 aa4.71□□□□□ -1.66
SPTLC3-205ENST00000476791 RPL34P49207 117 aaKnown RBP4.71□□□□□ -1.66
SPTLC3-205ENST00000476791 SNRPFP62306 86 aaKnown RBP4.71□□□□□ -1.66
SPTLC3-205ENST00000476791 LAGE3Q14657 143 aa4.71□□□□□ -1.66
SPTLC3-205ENST00000476791 ECSCRQ19T08 205 aa4.71□□□□□ -1.66
SPTLC3-205ENST00000476791 KRTAP19-4Q3LI73 84 aa4.71□□□□□ -1.66
SPTLC3-205ENST00000476791 RUSC1-AS1Q66K80 236 aa4.71□□□□□ -1.66
SPTLC3-205ENST00000476791 C22orf39Q6P5X5 142 aa4.71□□□□□ -1.66
SPTLC3-205ENST00000476791 KCTD18Q6PI47 426 aaPredicted RBP4.71□□□□□ -1.66
SPTLC3-205ENST00000476791 AMTNQ6UX39 209 aa4.71□□□□□ -1.66
SPTLC3-205ENST00000476791 TMEM99Q8N816 258 aa4.71□□□□□ -1.66
SPTLC3-205ENST00000476791 SUMF1Q8NBK3 374 aa4.71□□□□□ -1.66
SPTLC3-205ENST00000476791 GTSF1Q8WW33 167 aa4.71□□□□□ -1.66
SPTLC3-205ENST00000476791 RBMXL1Q96E39 390 aaKnown RBP4.71□□□□□ -1.66
SPTLC3-205ENST00000476791 CXCL16Q9H2A7 254 aa4.71□□□□□ -1.66
SPTLC3-205ENST00000476791 SDF2L1Q9HCN8 221 aa4.71□□□□□ -1.66
SPTLC3-205ENST00000476791 ANAPC10Q9UM13 185 aa4.71□□□□□ -1.66
SPTLC3-205ENST00000476791 DOCK4Q8N1I0 1966 aa4.71□□□□□ -1.66
SPTLC3-205ENST00000476791 EPM2AB3EWF7 344 aa4.7□□□□□ -1.66
SPTLC3-205ENST00000476791 F2Z2F3 143 aa4.7□□□□□ -1.66
SPTLC3-205ENST00000476791 J3QT63 122 aa4.7□□□□□ -1.66
SPTLC3-205ENST00000476791 PRRG2O14669 202 aa4.7□□□□□ -1.66
SPTLC3-205ENST00000476791 MRPS12O15235 138 aaKnown RBP4.7□□□□□ -1.66
SPTLC3-205ENST00000476791 SS18Q15532 418 aa4.7□□□□□ -1.66
SPTLC3-205ENST00000476791 COMMD6Q7Z4G1 85 aa4.7□□□□□ -1.66
SPTLC3-205ENST00000476791 MRGPREQ86SM8 312 aa4.7□□□□□ -1.66
SPTLC3-205ENST00000476791 NEXN-AS1Q8NBZ9 246 aa4.7□□□□□ -1.66
SPTLC3-205ENST00000476791 AQP3Q92482 292 aa4.7□□□□□ -1.66
SPTLC3-205ENST00000476791 CLEC7AQ9BXN2 247 aa4.7□□□□□ -1.66
SPTLC3-205ENST00000476791 PLA2G2DQ9UNK4 145 aa4.7□□□□□ -1.66
SPTLC3-205ENST00000476791 C2orf16Q68DN1 1984 aa4.7□□□□□ -1.66
SPTLC3-205ENST00000476791 COL5A3P25940 1745 aaPredicted RBP4.7□□□□□ -1.66
SPTLC3-205ENST00000476791 C3orf85A0A1B0GTC6 90 aa4.7□□□□□ -1.66
SPTLC3-205ENST00000476791 hADV29S1A0JD25 119 aa4.7□□□□□ -1.66
SPTLC3-205ENST00000476791 SCRG1O75711 98 aa4.7□□□□□ -1.66
SPTLC3-205ENST00000476791 PPP1R3DO95685 299 aa4.7□□□□□ -1.66
SPTLC3-205ENST00000476791 Q56UQ5 140 aa4.7□□□□□ -1.66
SPTLC3-205ENST00000476791 MRPL2Q5T653 305 aaKnown RBP4.7□□□□□ -1.66
SPTLC3-205ENST00000476791 PRR15Q8IV56 129 aa4.7□□□□□ -1.66
SPTLC3-205ENST00000476791 OR2T10Q8NGZ9 312 aa4.7□□□□□ -1.66
SPTLC3-205ENST00000476791 OR51H1Q8NH63 302 aa4.7□□□□□ -1.66
SPTLC3-205ENST00000476791 PPDPFLQ8WWR9 84 aa4.7□□□□□ -1.66
SPTLC3-205ENST00000476791 FGF11Q92914 225 aa4.7□□□□□ -1.66
SPTLC3-205ENST00000476791 PRR25Q96S07 402 aa4.7□□□□□ -1.66
SPTLC3-205ENST00000476791 HSPB1P04792 205 aaKnown RBP4.69□□□□□ -1.66
SPTLC3-205ENST00000476791 ASAH2BP0C7U1 165 aa4.69□□□□□ -1.66
SPTLC3-205ENST00000476791 RPL22P35268 128 aaKnown RBP4.69□□□□□ -1.66
SPTLC3-205ENST00000476791 ERVK-16P61578 105 aa4.69□□□□□ -1.66
SPTLC3-205ENST00000476791 CENPWQ5EE01 88 aa4.69□□□□□ -1.66
SPTLC3-205ENST00000476791 RPL7L1Q6DKI1 246 aaKnown RBP4.69□□□□□ -1.66
SPTLC3-205ENST00000476791 FP248Q71RG6 208 aaPredicted RBP4.69□□□□□ -1.66
SPTLC3-205ENST00000476791 WDR86Q86TI4 376 aa4.69□□□□□ -1.66
SPTLC3-205ENST00000476791 ZNF843Q8N446 348 aa4.69□□□□□ -1.66
SPTLC3-205ENST00000476791 RFLNBQ8N5W9 214 aa4.69□□□□□ -1.66
SPTLC3-205ENST00000476791 LINC00479Q96M42 142 aa4.69□□□□□ -1.66
SPTLC3-205ENST00000476791 GABARAPL1Q9H0R8 117 aa4.69□□□□□ -1.66
SPTLC3-205ENST00000476791 TRAPPC1Q9Y5R8 145 aa4.69□□□□□ -1.66
SPTLC3-205ENST00000476791 LAMB2P55268 1798 aa4.69□□□□□ -1.66
SPTLC3-205ENST00000476791 DOCK7Q96N67 2140 aa4.69□□□□□ -1.66
SPTLC3-205ENST00000476791 C5orf49A4QMS7 147 aa4.69□□□□□ -1.66
SPTLC3-205ENST00000476791 K7ESM1 405 aa4.69□□□□□ -1.66
SPTLC3-205ENST00000476791 LGALS9O00182 355 aa4.69□□□□□ -1.66
SPTLC3-205ENST00000476791 C1QAP02745 245 aa4.69□□□□□ -1.66
SPTLC3-205ENST00000476791 PYYP10082 97 aa4.69□□□□□ -1.66
SPTLC3-205ENST00000476791 B3GALT5-AS1P59052 145 aa4.69□□□□□ -1.66
SPTLC3-205ENST00000476791 RSPO1Q2MKA7 263 aaPredicted RBP4.69□□□□□ -1.66
SPTLC3-205ENST00000476791 PCSK4Q6UW60 755 aa4.69□□□□□ -1.66
SPTLC3-205ENST00000476791 TIFABQ6ZNK6 161 aa4.69□□□□□ -1.66
SPTLC3-205ENST00000476791 SMIM5Q71RC9 77 aa4.69□□□□□ -1.66
SPTLC3-205ENST00000476791 RNF182Q8N6D2 247 aa4.69□□□□□ -1.66
SPTLC3-205ENST00000476791 SMIM4Q8WVI0 70 aa4.69□□□□□ -1.66
SPTLC3-205ENST00000476791 SCRT2Q9NQ03 307 aa4.69□□□□□ -1.66
SPTLC3-205ENST00000476791 KLF13Q9Y2Y9 288 aaPredicted RBP4.69□□□□□ -1.66
SPTLC3-205ENST00000476791 MYO9BQ13459 2157 aa4.68□□□□□ -1.66
SPTLC3-205ENST00000476791 TRBV6-7A0A0A0MS04 114 aa4.68□□□□□ -1.66
SPTLC3-205ENST00000476791 A0A1B0GV50 99 aa4.68□□□□□ -1.66
SPTLC3-205ENST00000476791 K7EM74 188 aa4.68□□□□□ -1.66
SPTLC3-205ENST00000476791 HLA-DRB4P13762 266 aa4.68□□□□□ -1.66
SPTLC3-205ENST00000476791 SFTPDP35247 375 aa4.68□□□□□ -1.66
SPTLC3-205ENST00000476791 HBG1P69891 147 aa4.68□□□□□ -1.66
SPTLC3-205ENST00000476791 HBG2P69892 147 aa4.68□□□□□ -1.66
SPTLC3-205ENST00000476791 PLK5Q496M5 336 aa4.68□□□□□ -1.66
SPTLC3-205ENST00000476791 FAM19A3Q7Z5A8 133 aa4.68□□□□□ -1.66
SPTLC3-205ENST00000476791 OR8B2Q96RD0 313 aa4.68□□□□□ -1.66
SPTLC3-205ENST00000476791 HLA-DRB4X5D2U9 266 aa4.68□□□□□ -1.66
SPTLC3-205ENST00000476791 TNRC6CQ9HCJ0 1690 aaKnown RBP4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms