RNA–Protein interactions for RNA: ENST00000476642.5

HLA-DPA1-246, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 519 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-246ENST00000476642 IGHV3-48P01763 117 aa10.08□□□□□ -0.8
HLA-DPA1-246ENST00000476642 PRB2P02812 416 aaPredicted RBP10.08□□□□□ -0.8
HLA-DPA1-246ENST00000476642 BMI1P35226 326 aa10.08□□□□□ -0.8
HLA-DPA1-246ENST00000476642 RND2P52198 227 aa10.08□□□□□ -0.8
HLA-DPA1-246ENST00000476642 IL15RAQ13261 267 aa10.08□□□□□ -0.8
HLA-DPA1-246ENST00000476642 RAB32Q13637 225 aa10.08□□□□□ -0.8
HLA-DPA1-246ENST00000476642 KPRPQ5T749 579 aaPredicted RBP10.08□□□□□ -0.8
HLA-DPA1-246ENST00000476642 TMEM14EPQ6UXP3 125 aa10.08□□□□□ -0.8
HLA-DPA1-246ENST00000476642 TMEM190Q8WZ59 177 aa10.08□□□□□ -0.8
HLA-DPA1-246ENST00000476642 ACY3Q96HD9 319 aa10.08□□□□□ -0.8
HLA-DPA1-246ENST00000476642 CHRDL1Q9BU40 450 aa10.08□□□□□ -0.8
HLA-DPA1-246ENST00000476642 DAZ1Q9NQZ3 744 aaKnown RBP10.08□□□□□ -0.8
HLA-DPA1-246ENST00000476642 E5RGE8 158 aa10.07□□□□□ -0.8
HLA-DPA1-246ENST00000476642 FNDC10F2Z333 226 aa10.07□□□□□ -0.8
HLA-DPA1-246ENST00000476642 YIF1AO95070 293 aa10.07□□□□□ -0.8
HLA-DPA1-246ENST00000476642 SIX6O95475 246 aa10.07□□□□□ -0.8
HLA-DPA1-246ENST00000476642 OR10J1P30954 320 aa10.07□□□□□ -0.8
HLA-DPA1-246ENST00000476642 ADMP35318 185 aa10.07□□□□□ -0.8
HLA-DPA1-246ENST00000476642 CAV2P51636 162 aa10.07□□□□□ -0.8
HLA-DPA1-246ENST00000476642 PAX9P55771 341 aa10.07□□□□□ -0.8
HLA-DPA1-246ENST00000476642 YPEL3P61236 119 aaPredicted RBP10.07□□□□□ -0.8
HLA-DPA1-246ENST00000476642 STX12Q86Y82 276 aa10.07□□□□□ -0.8
HLA-DPA1-246ENST00000476642 OR2K2Q8NGT1 345 aa10.07□□□□□ -0.8
HLA-DPA1-246ENST00000476642 MRAPQ8TCY5 172 aa10.07□□□□□ -0.8
HLA-DPA1-246ENST00000476642 DYNLRB2Q8TF09 96 aa10.07□□□□□ -0.8
HLA-DPA1-246ENST00000476642 Q8WTZ3 238 aa10.07□□□□□ -0.8
HLA-DPA1-246ENST00000476642 NPIPB3Q92617 1050 aa10.07□□□□□ -0.8
HLA-DPA1-246ENST00000476642 GGACTQ9BVM4 153 aa10.07□□□□□ -0.8
HLA-DPA1-246ENST00000476642 TECRQ9NZ01 308 aaKnown RBP10.07□□□□□ -0.8
HLA-DPA1-246ENST00000476642 MRPL27Q9P0M9 148 aaKnown RBP10.07□□□□□ -0.8
HLA-DPA1-246ENST00000476642 PRKDCP78527 4128 aaKnown RBP10.06□□□□□ -0.8
HLA-DPA1-246ENST00000476642 C2orf70A6NJV1 201 aa10.06□□□□□ -0.8
HLA-DPA1-246ENST00000476642 ZFP92A6NM28 416 aa10.06□□□□□ -0.8
HLA-DPA1-246ENST00000476642 DEDDO75618 318 aa10.06□□□□□ -0.8
HLA-DPA1-246ENST00000476642 CFDP00746 253 aaPredicted RBP10.06□□□□□ -0.8
HLA-DPA1-246ENST00000476642 CSN3P07498 182 aa10.06□□□□□ -0.8
HLA-DPA1-246ENST00000476642 IGLC1P0CG04 106 aa10.06□□□□□ -0.8
HLA-DPA1-246ENST00000476642 DLK1P80370 383 aa10.06□□□□□ -0.8
HLA-DPA1-246ENST00000476642 EGFEM1PQ0D2K5 195 aa10.06□□□□□ -0.8
HLA-DPA1-246ENST00000476642 GAMTQ14353 236 aa10.06□□□□□ -0.8
HLA-DPA1-246ENST00000476642 MLANAQ16655 118 aa10.06□□□□□ -0.8
HLA-DPA1-246ENST00000476642 OR8G2PQ6IF36 304 aa10.06□□□□□ -0.8
HLA-DPA1-246ENST00000476642 C11orf87Q6NUJ2 197 aa10.06□□□□□ -0.8
HLA-DPA1-246ENST00000476642 NARS2Q96I59 477 aaKnown RBP10.06□□□□□ -0.8
HLA-DPA1-246ENST00000476642 C20orf24Q9BUV8 137 aa10.06□□□□□ -0.8
HLA-DPA1-246ENST00000476642 SLC25A31Q9H0C2 315 aa10.06□□□□□ -0.8
HLA-DPA1-246ENST00000476642 LYRM2Q9NU23 88 aaPredicted RBP10.06□□□□□ -0.8
HLA-DPA1-246ENST00000476642 IGHV3-35A0A0C4DH35 117 aa10.05□□□□□ -0.8
HLA-DPA1-246ENST00000476642 PRSS46E5RG02 174 aa10.05□□□□□ -0.8
HLA-DPA1-246ENST00000476642 IGLV1-51P01701 117 aa10.05□□□□□ -0.8
HLA-DPA1-246ENST00000476642 METTL15P1P0C7V9 234 aa10.05□□□□□ -0.8
HLA-DPA1-246ENST00000476642 FOLR2P14207 255 aa10.05□□□□□ -0.8
HLA-DPA1-246ENST00000476642 CBLN1P23435 193 aa10.05□□□□□ -0.8
HLA-DPA1-246ENST00000476642 H2BFSP57053 126 aa10.05□□□□□ -0.8
HLA-DPA1-246ENST00000476642 RRAS2P62070 204 aaPredicted RBP10.05□□□□□ -0.8
HLA-DPA1-246ENST00000476642 HBG1P69891 147 aa10.05□□□□□ -0.8
HLA-DPA1-246ENST00000476642 HBG2P69892 147 aa10.05□□□□□ -0.8
HLA-DPA1-246ENST00000476642 AKR1C1Q04828 323 aa10.05□□□□□ -0.8
HLA-DPA1-246ENST00000476642 FGL1Q08830 312 aa10.05□□□□□ -0.8
HLA-DPA1-246ENST00000476642 LCN12Q6JVE5 192 aa10.05□□□□□ -0.8
HLA-DPA1-246ENST00000476642 PPP1R1CQ8WVI7 109 aa10.05□□□□□ -0.8
HLA-DPA1-246ENST00000476642 TMEM231Q9H6L2 316 aa10.05□□□□□ -0.8
HLA-DPA1-246ENST00000476642 PFDN2Q9UHV9 154 aa10.05□□□□□ -0.8
HLA-DPA1-246ENST00000476642 PUS1Q9Y606 427 aaKnown RBP eCLIP10.05□□□□□ -0.8
HLA-DPA1-246ENST00000476642 NOTCH3Q9UM47 2321 aa10.04□□□□□ -0.8
HLA-DPA1-246ENST00000476642 TRAV14DV4A0A0A6YYC5 116 aa10.04□□□□□ -0.8
HLA-DPA1-246ENST00000476642 TMEM213A2RRL7 107 aa10.04□□□□□ -0.8
HLA-DPA1-246ENST00000476642 TOMM40O96008 361 aa10.04□□□□□ -0.8
HLA-DPA1-246ENST00000476642 IGKV1-17P01599 117 aa10.04□□□□□ -0.8
HLA-DPA1-246ENST00000476642 CD5P06127 495 aa10.04□□□□□ -0.8
HLA-DPA1-246ENST00000476642 RD3LP0DJH9 198 aa10.04□□□□□ -0.8
HLA-DPA1-246ENST00000476642 C8orf88P0DMB2 117 aa10.04□□□□□ -0.8
HLA-DPA1-246ENST00000476642 S100A7P31151 101 aa10.04□□□□□ -0.8
HLA-DPA1-246ENST00000476642 P2RY1P47900 373 aa10.04□□□□□ -0.8
HLA-DPA1-246ENST00000476642 SULT1A1P50225 295 aa10.04□□□□□ -0.8
HLA-DPA1-246ENST00000476642 TIGITQ495A1 244 aa10.04□□□□□ -0.8
HLA-DPA1-246ENST00000476642 LRRC37A5PQ49AS3 106 aa10.04□□□□□ -0.8
HLA-DPA1-246ENST00000476642 TOMM20LQ6UXN7 152 aa10.04□□□□□ -0.8
HLA-DPA1-246ENST00000476642 UNQ9165/PRO28630Q6UXU0 137 aa10.04□□□□□ -0.8
HLA-DPA1-246ENST00000476642 IL34Q6ZMJ4 242 aa10.04□□□□□ -0.8
HLA-DPA1-246ENST00000476642 ACOT7LQ6ZUV0 252 aa10.04□□□□□ -0.8
HLA-DPA1-246ENST00000476642 TMEM144Q7Z5S9 345 aa10.04□□□□□ -0.8
HLA-DPA1-246ENST00000476642 TRGV9Q99603 122 aa10.04□□□□□ -0.8
HLA-DPA1-246ENST00000476642 NPVFQ9HCQ7 196 aa10.04□□□□□ -0.8
HLA-DPA1-246ENST00000476642 MRPL36Q9P0J6 103 aaKnown RBP10.04□□□□□ -0.8
HLA-DPA1-246ENST00000476642 A0A1W2PS18 150 aa10.03□□□□□ -0.8
HLA-DPA1-246ENST00000476642 SMCO3A2RU48 225 aa10.03□□□□□ -0.8
HLA-DPA1-246ENST00000476642 PMS2P5A8MQ11 134 aa10.03□□□□□ -0.8
HLA-DPA1-246ENST00000476642 MPC2O95563 127 aa10.03□□□□□ -0.8
HLA-DPA1-246ENST00000476642 S100A11P31949 105 aa10.03□□□□□ -0.8
HLA-DPA1-246ENST00000476642 NUP62P37198 522 aaPredicted RBP10.03□□□□□ -0.8
HLA-DPA1-246ENST00000476642 ATP6V1FQ16864 119 aa10.03□□□□□ -0.8
HLA-DPA1-246ENST00000476642 TM4SF20Q53R12 229 aa10.03□□□□□ -0.8
HLA-DPA1-246ENST00000476642 LAMTOR1Q6IAA8 161 aa10.03□□□□□ -0.8
HLA-DPA1-246ENST00000476642 TMEM252Q8N6L7 170 aa10.03□□□□□ -0.8
HLA-DPA1-246ENST00000476642 THAP8Q8NA92 274 aa10.03□□□□□ -0.8
HLA-DPA1-246ENST00000476642 OR51G1Q8NGK1 321 aa10.03□□□□□ -0.8
HLA-DPA1-246ENST00000476642 THAP6Q8TBB0 222 aa10.03□□□□□ -0.8
HLA-DPA1-246ENST00000476642 METTL26Q96S19 204 aa10.03□□□□□ -0.8
HLA-DPA1-246ENST00000476642 C11orf1Q9H5F2 150 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms