RNA–Protein interactions for RNA: ENST00000476544.1

RAB5A-208, Transcript of RAB5A, member RAS oncogene family, human

TSL 2

Gene RAB5A, Length 532 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB5A-208	ENST00000476544	PAX9	P55771	341 aa		10.17	□□□□□ -0.78
RAB5A-208	ENST00000476544	GAMT	Q14353	236 aa		10.17	□□□□□ -0.78
RAB5A-208	ENST00000476544	GTSCR1	Q86UQ5	136 aa		10.17	□□□□□ -0.78
RAB5A-208	ENST00000476544	MITD1	Q8WV92	249 aa		10.17	□□□□□ -0.78
RAB5A-208	ENST00000476544	ST8SIA2	Q92186	375 aa		10.17	□□□□□ -0.78
RAB5A-208	ENST00000476544	IGHV3-66	A0A0C4DH42	116 aa		10.16	□□□□□ -0.78
RAB5A-208	ENST00000476544	FAM90A26	D6RGX4	464 aa		10.16	□□□□□ -0.78
RAB5A-208	ENST00000476544	PRSS46	E5RG02	174 aa		10.16	□□□□□ -0.78
RAB5A-208	ENST00000476544	SLC25A4	P12235	298 aa		10.16	□□□□□ -0.78
RAB5A-208	ENST00000476544	CRYBB3	P26998	211 aa		10.16	□□□□□ -0.78
RAB5A-208	ENST00000476544	RBPMS2	Q6ZRY4	209 aa	Known RBP	10.16	□□□□□ -0.78
RAB5A-208	ENST00000476544	OR4D5	Q8NGN0	318 aa		10.16	□□□□□ -0.78
RAB5A-208	ENST00000476544	TUBA4B	Q9H853	241 aa		10.16	□□□□□ -0.78
RAB5A-208	ENST00000476544	PTTG2	Q9NZH5	202 aa		10.16	□□□□□ -0.78
RAB5A-208	ENST00000476544	WRB	O00258	174 aa		10.15	□□□□□ -0.78
RAB5A-208	ENST00000476544	SYNGR2	O43760	224 aa		10.15	□□□□□ -0.78
RAB5A-208	ENST00000476544	DFFB	O76075	338 aa		10.15	□□□□□ -0.78
RAB5A-208	ENST00000476544	OR10J1	P30954	320 aa		10.15	□□□□□ -0.78
RAB5A-208	ENST00000476544	GPX4	P36969	197 aa	Predicted RBP	10.15	□□□□□ -0.78
RAB5A-208	ENST00000476544	ATP5I	P56385	69 aa	Predicted RBP	10.15	□□□□□ -0.78
RAB5A-208	ENST00000476544	YPEL3	P61236	119 aa	Predicted RBP	10.15	□□□□□ -0.78
RAB5A-208	ENST00000476544	POLR2G	P62487	172 aa	Known RBP eCLIP	10.15	□□□□□ -0.78
RAB5A-208	ENST00000476544	ODF3L2	Q3SX64	289 aa		10.15	□□□□□ -0.78
RAB5A-208	ENST00000476544	C4orf46	Q504U0	113 aa		10.15	□□□□□ -0.78
RAB5A-208	ENST00000476544	SPAG8	Q99932	426 aa	Predicted RBP	10.15	□□□□□ -0.78
RAB5A-208	ENST00000476544	SEC22C	Q9BRL7	303 aa		10.15	□□□□□ -0.78
RAB5A-208	ENST00000476544	C20orf85	Q9H1P6	137 aa		10.15	□□□□□ -0.78
RAB5A-208	ENST00000476544	TRAV6	A0A075B6T7	132 aa		10.14	□□□□□ -0.79
RAB5A-208	ENST00000476544	IGKV1OR2-108	A0A075B7D4	117 aa		10.14	□□□□□ -0.79
RAB5A-208	ENST00000476544	TRAV30	A0A087WSZ9	112 aa		10.14	□□□□□ -0.79
RAB5A-208	ENST00000476544	RPS10-NUDT3	A0A1W2PQS6	291 aa		10.14	□□□□□ -0.79
RAB5A-208	ENST00000476544	PMS2P5	A8MQ11	134 aa		10.14	□□□□□ -0.79
RAB5A-208	ENST00000476544	IFNA4	P05014	189 aa		10.14	□□□□□ -0.79
RAB5A-208	ENST00000476544	ASAH1	Q13510	395 aa		10.14	□□□□□ -0.79
RAB5A-208	ENST00000476544	SLC16A13	Q7RTY0	426 aa		10.14	□□□□□ -0.79
RAB5A-208	ENST00000476544	NOXA1	Q86UR1	476 aa		10.14	□□□□□ -0.79
RAB5A-208	ENST00000476544	STPG3	Q8N7X2	389 aa		10.14	□□□□□ -0.79
RAB5A-208	ENST00000476544	S100Z	Q8WXG8	99 aa		10.14	□□□□□ -0.79
RAB5A-208	ENST00000476544	ACY3	Q96HD9	319 aa		10.14	□□□□□ -0.79
RAB5A-208	ENST00000476544	RCHY1	Q96PM5	261 aa		10.14	□□□□□ -0.79
RAB5A-208	ENST00000476544	SRD5A3	Q9H8P0	318 aa		10.14	□□□□□ -0.79
RAB5A-208	ENST00000476544	PIGBOS1	A0A0B4J2F0	54 aa		10.13	□□□□□ -0.79
RAB5A-208	ENST00000476544	UPK1B	O75841	260 aa		10.13	□□□□□ -0.79
RAB5A-208	ENST00000476544	PSG1	P11464	419 aa		10.13	□□□□□ -0.79
RAB5A-208	ENST00000476544	NPPC	P23582	126 aa		10.13	□□□□□ -0.79
RAB5A-208	ENST00000476544	ZNF90	Q03938	601 aa		10.13	□□□□□ -0.79
RAB5A-208	ENST00000476544	USF2	Q15853	346 aa	Predicted RBP	10.13	□□□□□ -0.79
RAB5A-208	ENST00000476544	ZNF124	Q15973	351 aa		10.13	□□□□□ -0.79
RAB5A-208	ENST00000476544	LAMTOR1	Q6IAA8	161 aa		10.13	□□□□□ -0.79
RAB5A-208	ENST00000476544	TCF24	Q7RTU0	167 aa		10.13	□□□□□ -0.79
RAB5A-208	ENST00000476544	GBGT1	Q8N5D6	347 aa		10.13	□□□□□ -0.79
RAB5A-208	ENST00000476544	FAM24B	Q8N5W8	94 aa		10.13	□□□□□ -0.79
RAB5A-208	ENST00000476544	OR1S2	Q8NGQ3	325 aa		10.13	□□□□□ -0.79
RAB5A-208	ENST00000476544	COQ8A	Q8NI60	647 aa		10.13	□□□□□ -0.79
RAB5A-208	ENST00000476544	WWC2-AS2	Q96NR7	200 aa		10.13	□□□□□ -0.79
RAB5A-208	ENST00000476544	RETN	Q9HD89	108 aa		10.13	□□□□□ -0.79
RAB5A-208	ENST00000476544	NUDT15	Q9NV35	164 aa		10.13	□□□□□ -0.79
RAB5A-208	ENST00000476544	UBQLN2	Q9UHD9	624 aa		10.13	□□□□□ -0.79
RAB5A-208	ENST00000476544	IGKV3-7	A0A075B6H7	116 aa		10.12	□□□□□ -0.79
RAB5A-208	ENST00000476544	MED6	O75586	246 aa		10.12	□□□□□ -0.79
RAB5A-208	ENST00000476544	CCNK	O75909	580 aa		10.12	□□□□□ -0.79
RAB5A-208	ENST00000476544	H2AFB2	P0C5Z0	115 aa		10.12	□□□□□ -0.79
RAB5A-208	ENST00000476544	RD3L	P0DJH9	198 aa		10.12	□□□□□ -0.79
RAB5A-208	ENST00000476544	IL15RA	Q13261	267 aa		10.12	□□□□□ -0.79
RAB5A-208	ENST00000476544	ZNF846	Q147U1	533 aa		10.12	□□□□□ -0.79
RAB5A-208	ENST00000476544	ETFRF1	Q6IPR1	90 aa		10.12	□□□□□ -0.79
RAB5A-208	ENST00000476544	TMEM182	Q6ZP80	229 aa	Predicted RBP	10.12	□□□□□ -0.79
RAB5A-208	ENST00000476544	ZNF431	Q8TF32	576 aa	Predicted RBP	10.12	□□□□□ -0.79
RAB5A-208	ENST00000476544		Q8WTZ3	238 aa		10.12	□□□□□ -0.79
RAB5A-208	ENST00000476544	BATF3	Q9NR55	127 aa		10.12	□□□□□ -0.79
RAB5A-208	ENST00000476544	CCS	O14618	274 aa		10.11	□□□□□ -0.79
RAB5A-208	ENST00000476544	TOMM40	O96008	361 aa		10.11	□□□□□ -0.79
RAB5A-208	ENST00000476544	MBP	P02686	304 aa	Predicted RBP	10.11	□□□□□ -0.79
RAB5A-208	ENST00000476544	TFPI2	P48307	235 aa		10.11	□□□□□ -0.79
RAB5A-208	ENST00000476544	IAH1	Q2TAA2	248 aa	Predicted RBP	10.11	□□□□□ -0.79
RAB5A-208	ENST00000476544	SPANXN5	Q5MJ07	72 aa		10.11	□□□□□ -0.79
RAB5A-208	ENST00000476544	APRG1	Q8IVJ8	170 aa		10.11	□□□□□ -0.79
RAB5A-208	ENST00000476544	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	10.11	□□□□□ -0.79
RAB5A-208	ENST00000476544	SMIM8	Q96KF7	97 aa		10.11	□□□□□ -0.79
RAB5A-208	ENST00000476544	GINS3	Q9BRX5	216 aa		10.11	□□□□□ -0.79
RAB5A-208	ENST00000476544	C11orf1	Q9H5F2	150 aa		10.11	□□□□□ -0.79
RAB5A-208	ENST00000476544	EDA2R	Q9HAV5	297 aa		10.11	□□□□□ -0.79
RAB5A-208	ENST00000476544	FAM240B	A0A1B0GVZ2	78 aa		10.1	□□□□□ -0.79
RAB5A-208	ENST00000476544		H3BP45	60 aa		10.1	□□□□□ -0.79
RAB5A-208	ENST00000476544	IFNA21	P01568	189 aa		10.1	□□□□□ -0.79
RAB5A-208	ENST00000476544	NKX2-1	P43699	371 aa	Predicted RBP	10.1	□□□□□ -0.79
RAB5A-208	ENST00000476544	ARL16	Q0P5N6	197 aa		10.1	□□□□□ -0.79
RAB5A-208	ENST00000476544	C16orf54	Q6UWD8	224 aa		10.1	□□□□□ -0.79
RAB5A-208	ENST00000476544	WFDC3	Q8IUB2	231 aa		10.1	□□□□□ -0.79
RAB5A-208	ENST00000476544	THAP8	Q8NA92	274 aa		10.1	□□□□□ -0.79
RAB5A-208	ENST00000476544	OR51G1	Q8NGK1	321 aa		10.1	□□□□□ -0.79
RAB5A-208	ENST00000476544	GLMP	Q8WWB7	406 aa		10.1	□□□□□ -0.79
RAB5A-208	ENST00000476544	CIB3	Q96Q77	187 aa	Predicted RBP	10.1	□□□□□ -0.79
RAB5A-208	ENST00000476544	FAM110A	Q9BQ89	295 aa		10.1	□□□□□ -0.79
RAB5A-208	ENST00000476544	MS4A6A	Q9H2W1	248 aa		10.1	□□□□□ -0.79
RAB5A-208	ENST00000476544	GSKIP	Q9P0R6	139 aa		10.1	□□□□□ -0.79
RAB5A-208	ENST00000476544	RCL1	Q9Y2P8	373 aa	Known RBP	10.1	□□□□□ -0.79
RAB5A-208	ENST00000476544	BUB3	O43684	328 aa		10.09	□□□□□ -0.79
RAB5A-208	ENST00000476544	IL5	P05113	134 aa		10.09	□□□□□ -0.79
RAB5A-208	ENST00000476544	P2RY1	P47900	373 aa		10.09	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms