RNA–Protein interactions for RNA: ENST00000475288.5

PCGF3-209, Transcript of polycomb group ring finger 3, humanhuman

TSL 3

Gene PCGF3, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-209ENST00000475288 AARDQ4LEZ3 155 aa12.83□□□□□ -0.36
PCGF3-209ENST00000475288 LHFPL1Q86WI0 220 aa12.83□□□□□ -0.36
PCGF3-209ENST00000475288 TMEM230Q96A57 120 aa12.83□□□□□ -0.36
PCGF3-209ENST00000475288 RAB40CQ96S21 281 aa12.83□□□□□ -0.36
PCGF3-209ENST00000475288 NDUFAF3Q9BU61 184 aa12.83□□□□□ -0.36
PCGF3-209ENST00000475288 CELA1Q9UNI1 258 aa12.83□□□□□ -0.36
PCGF3-209ENST00000475288 ETV6P41212 452 aa12.82□□□□□ -0.36
PCGF3-209ENST00000475288 HOXA1P49639 335 aaPredicted RBP12.82□□□□□ -0.36
PCGF3-209ENST00000475288 PPP5CP53041 499 aa12.82□□□□□ -0.36
PCGF3-209ENST00000475288 NUTF2P61970 127 aaKnown RBP12.82□□□□□ -0.36
PCGF3-209ENST00000475288 LGALS9BQ3B8N2 356 aa12.82□□□□□ -0.36
PCGF3-209ENST00000475288 C16orf54Q6UWD8 224 aa12.82□□□□□ -0.36
PCGF3-209ENST00000475288 GLMPQ8WWB7 406 aa12.82□□□□□ -0.36
PCGF3-209ENST00000475288 TP53RKQ96S44 253 aa12.82□□□□□ -0.36
PCGF3-209ENST00000475288 CLEC5AQ9NY25 188 aa12.82□□□□□ -0.36
PCGF3-209ENST00000475288 RPS10-NUDT3A0A1W2PQS6 291 aa12.81□□□□□ -0.36
PCGF3-209ENST00000475288 PRSS29PA6NIE9 313 aa12.81□□□□□ -0.36
PCGF3-209ENST00000475288 RTL8CO15255 209 aa12.81□□□□□ -0.36
PCGF3-209ENST00000475288 NPY1RP25929 384 aa12.81□□□□□ -0.36
PCGF3-209ENST00000475288 PIGPP57054 158 aa12.81□□□□□ -0.36
PCGF3-209ENST00000475288 OR1S2Q8NGQ3 325 aa12.81□□□□□ -0.36
PCGF3-209ENST00000475288 ENY2Q9NPA8 101 aa12.81□□□□□ -0.36
PCGF3-209ENST00000475288 B3GALNT1O75752 331 aa12.8□□□□□ -0.36
PCGF3-209ENST00000475288 S100A5P33763 92 aa12.8□□□□□ -0.36
PCGF3-209ENST00000475288 HTR2BP41595 481 aa12.8□□□□□ -0.36
PCGF3-209ENST00000475288 YPEL3P61236 119 aaPredicted RBP12.8□□□□□ -0.36
PCGF3-209ENST00000475288 DHRS2Q13268 280 aa12.8□□□□□ -0.36
PCGF3-209ENST00000475288 TIGITQ495A1 244 aa12.8□□□□□ -0.36
PCGF3-209ENST00000475288 PSMG4Q5JS54 123 aa12.8□□□□□ -0.36
PCGF3-209ENST00000475288 ARRDC1Q8N5I2 433 aa12.8□□□□□ -0.36
PCGF3-209ENST00000475288 NEU1Q99519 415 aa12.8□□□□□ -0.36
PCGF3-209ENST00000475288 MIXL1Q9H2W2 232 aa12.8□□□□□ -0.36
PCGF3-209ENST00000475288 C3orf85A0A1B0GTC6 90 aa12.79□□□□□ -0.36
PCGF3-209ENST00000475288 CTDSP2O14595 271 aa12.79□□□□□ -0.36
PCGF3-209ENST00000475288 HNRNPCP07910 306 aaKnown RBP eCLIP12.79□□□□□ -0.36
PCGF3-209ENST00000475288 IGLC1P0CG04 106 aa12.79□□□□□ -0.36
PCGF3-209ENST00000475288 SLC25A4P12235 298 aa12.79□□□□□ -0.36
PCGF3-209ENST00000475288 PGAM2P15259 253 aa12.79□□□□□ -0.36
PCGF3-209ENST00000475288 TBPP20226 339 aa12.79□□□□□ -0.36
PCGF3-209ENST00000475288 UCP1P25874 307 aa12.79□□□□□ -0.36
PCGF3-209ENST00000475288 SPCS3P61009 180 aa12.79□□□□□ -0.36
PCGF3-209ENST00000475288 SNRPD3P62318 126 aaKnown RBP12.79□□□□□ -0.36
PCGF3-209ENST00000475288 MLANAQ16655 118 aa12.79□□□□□ -0.36
PCGF3-209ENST00000475288 CCDC190Q86UF4 302 aa12.79□□□□□ -0.36
PCGF3-209ENST00000475288 SNX29P2Q8IUI4 249 aa12.79□□□□□ -0.36
PCGF3-209ENST00000475288 OR52E5Q8NH55 327 aa12.79□□□□□ -0.36
PCGF3-209ENST00000475288 Q8WTZ3 238 aa12.79□□□□□ -0.36
PCGF3-209ENST00000475288 S100ZQ8WXG8 99 aa12.79□□□□□ -0.36
PCGF3-209ENST00000475288 RRNAD1Q96FB5 475 aaKnown RBP12.79□□□□□ -0.36
PCGF3-209ENST00000475288 FAM210BQ96KR6 192 aa12.79□□□□□ -0.36
PCGF3-209ENST00000475288 RABL2AQ9UBK7 228 aaPredicted RBP12.79□□□□□ -0.36
PCGF3-209ENST00000475288 RABL2BQ9UNT1 228 aa12.79□□□□□ -0.36
PCGF3-209ENST00000475288 TMEM189A5PLL7 270 aa12.78□□□□□ -0.36
PCGF3-209ENST00000475288 FAM90A26D6RGX4 464 aa12.78□□□□□ -0.36
PCGF3-209ENST00000475288 H3BMM0 161 aa12.78□□□□□ -0.36
PCGF3-209ENST00000475288 CD74P04233 296 aa12.78□□□□□ -0.36
PCGF3-209ENST00000475288 ZNF705AQ6ZN79 300 aaPredicted RBP12.78□□□□□ -0.36
PCGF3-209ENST00000475288 FAM219AQ8IW50 185 aa12.78□□□□□ -0.36
PCGF3-209ENST00000475288 RNASEH2CQ8TDP1 164 aaKnown RBP12.78□□□□□ -0.36
PCGF3-209ENST00000475288 NRN1Q9NPD7 142 aa12.78□□□□□ -0.36
PCGF3-209ENST00000475288 COMMD3Q9UBI1 195 aa12.78□□□□□ -0.36
PCGF3-209ENST00000475288 A0A0G2JRQ6 117 aa12.77□□□□□ -0.37
PCGF3-209ENST00000475288 SMIM9A6NGZ8 99 aa12.77□□□□□ -0.37
PCGF3-209ENST00000475288 M0QYG6 137 aa12.77□□□□□ -0.37
PCGF3-209ENST00000475288 RGS5O15539 181 aa12.77□□□□□ -0.37
PCGF3-209ENST00000475288 PI3P19957 117 aa12.77□□□□□ -0.37
PCGF3-209ENST00000475288 TNFSF8P32971 234 aa12.77□□□□□ -0.37
PCGF3-209ENST00000475288 TRIM16LQ309B1 348 aa12.77□□□□□ -0.37
PCGF3-209ENST00000475288 RNASE10Q5GAN6 216 aaKnown RBP12.77□□□□□ -0.37
PCGF3-209ENST00000475288 PRSS54Q6PEW0 395 aa12.77□□□□□ -0.37
PCGF3-209ENST00000475288 CCDC71LQ8N9Z2 235 aa12.77□□□□□ -0.37
PCGF3-209ENST00000475288 ZFAND1Q8TCF1 268 aa12.77□□□□□ -0.37
PCGF3-209ENST00000475288 ZNF705FA8MVS1 300 aaPredicted RBP12.76□□□□□ -0.37
PCGF3-209ENST00000475288 GSTZ1O43708 216 aaPredicted RBP12.76□□□□□ -0.37
PCGF3-209ENST00000475288 HPGDSO60760 199 aa12.76□□□□□ -0.37
PCGF3-209ENST00000475288 ZNF705DP0CH99 300 aaPredicted RBP12.76□□□□□ -0.37
PCGF3-209ENST00000475288 ZNF705BP0CI00 300 aaPredicted RBP12.76□□□□□ -0.37
PCGF3-209ENST00000475288 HLA-DRB4P13762 266 aa12.76□□□□□ -0.37
PCGF3-209ENST00000475288 ELK1P19419 428 aa12.76□□□□□ -0.37
PCGF3-209ENST00000475288 C2orf83Q53S99 150 aa12.76□□□□□ -0.37
PCGF3-209ENST00000475288 ZNF767PQ75MW2 155 aa12.76□□□□□ -0.37
PCGF3-209ENST00000475288 SOSTQ9BQB4 213 aa12.76□□□□□ -0.37
PCGF3-209ENST00000475288 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.76□□□□□ -0.37
PCGF3-209ENST00000475288 COPZ2Q9P299 210 aa12.76□□□□□ -0.37
PCGF3-209ENST00000475288 XCL2Q9UBD3 114 aa12.76□□□□□ -0.37
PCGF3-209ENST00000475288 HLA-DRB4X5D2U9 266 aa12.76□□□□□ -0.37
PCGF3-209ENST00000475288 TEX48A0A1B0GUV7 120 aa12.75□□□□□ -0.37
PCGF3-209ENST00000475288 BUB3O43684 328 aa12.75□□□□□ -0.37
PCGF3-209ENST00000475288 SPART-AS1P0CW21 52 aa12.75□□□□□ -0.37
PCGF3-209ENST00000475288 OR10J1P30954 320 aa12.75□□□□□ -0.37
PCGF3-209ENST00000475288 NKX2-1P43699 371 aaPredicted RBP12.75□□□□□ -0.37
PCGF3-209ENST00000475288 RND2P52198 227 aa12.75□□□□□ -0.37
PCGF3-209ENST00000475288 DHODHQ02127 395 aa12.75□□□□□ -0.37
PCGF3-209ENST00000475288 SPANXN2Q5MJ10 180 aa12.75□□□□□ -0.37
PCGF3-209ENST00000475288 SIGLEC15Q6ZMC9 328 aa12.75□□□□□ -0.37
PCGF3-209ENST00000475288 Q6ZR54 194 aa12.75□□□□□ -0.37
PCGF3-209ENST00000475288 Q6ZRM9 215 aa12.75□□□□□ -0.37
PCGF3-209ENST00000475288 CLUHP3Q96NS8 147 aa12.75□□□□□ -0.37
PCGF3-209ENST00000475288 MUC4Q99102 2169 aa12.74□□□□□ -0.37
PCGF3-209ENST00000475288 CDS2O95674 445 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms