RNA–Protein interactions for RNA: ENST00000474742.1

HDAC9-222, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-222ENST00000474742 DLEU1O43261 78 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 TIMM17BO60830 172 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 ZNF682O95780 498 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 NCR2O95944 276 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 LTAP01374 205 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 IGKV1-17P01599 117 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 IGLV3-25P01717 112 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 IGLV3-27P01718 113 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 IGHV3-53P01767 116 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 IGHV3-7P01780 117 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 TRACP01848 142 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 C1QAP02745 245 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 TRGC2P03986 189 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 APODP05090 189 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 GPX1P07203 203 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 CTSDP07339 412 aaPredicted RBP0.48□□□□□ -2.33
HDAC9-222ENST00000474742 PFN1P07737 140 aaKnown RBP0.48□□□□□ -2.33
HDAC9-222ENST00000474742 TFPTP0C1Z6 253 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 NBEAP1P0C6P0 100 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 LINC00032P0C843 101 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 TLX1NBP0CAT3 122 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 TRGC1P0CF51 173 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 MPC1LP0DKB6 136 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 CD28P10747 220 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 SLC25A4P12235 298 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 HLA-EP13747 358 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 FABP4P15090 132 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 CBR1P16152 277 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 HIST1H1DP16402 221 aaKnown RBP0.48□□□□□ -2.33
HDAC9-222ENST00000474742 ZNF25P17030 456 aaPredicted RBP0.48□□□□□ -2.33
HDAC9-222ENST00000474742 RPL7P18124 248 aaKnown RBP0.48□□□□□ -2.33
HDAC9-222ENST00000474742 GZMHP20718 246 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 FGF7P21781 194 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 NPPCP23582 126 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 CRHBPP24387 322 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 HLA-DMBP28068 263 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 SRIP30626 198 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 CKS2P33552 79 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 ZNF93P35789 620 aaPredicted RBP0.48□□□□□ -2.33
HDAC9-222ENST00000474742 TGFBR1P36897 503 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 POLR2IP36954 125 aaKnown RBP0.48□□□□□ -2.33
HDAC9-222ENST00000474742 RBP2P50120 134 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 DYNLT3P51808 116 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 ZNF136P52737 540 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 SMIM11AP58511 58 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 GNG2P59768 71 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 RPS20P60866 119 aaKnown RBP0.48□□□□□ -2.33
HDAC9-222ENST00000474742 RPS28P62857 69 aaKnown RBP0.48□□□□□ -2.33
HDAC9-222ENST00000474742 RBX1P62877 108 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 HBBP68871 147 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 CCL20P78556 96 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 HIST1H1AQ02539 215 aaPredicted RBP0.48□□□□□ -2.33
HDAC9-222ENST00000474742 ZNF117Q03924 483 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 RELAQ04206 551 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 EMX2Q04743 252 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 BSPH1Q075Z2 132 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 LOXL1Q08397 574 aaPredicted RBP0.48□□□□□ -2.33
HDAC9-222ENST00000474742 KLRD1Q13241 179 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 MIAQ16674 131 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 RRN3P1Q2M238 152 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 ZNF181Q2M3W8 571 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 KRTAP13-2Q52LG2 175 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 PYDC2Q56P42 97 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 RNASE13Q5GAN3 156 aaKnown RBP0.48□□□□□ -2.33
HDAC9-222ENST00000474742 ZNF678Q5SXM1 525 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 C10orf91Q5T1B1 145 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 LINC01545Q5VT33 79 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 C1orf140Q5VVS0 124 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 ZNF660Q6AZW8 331 aaPredicted RBP0.48□□□□□ -2.33
HDAC9-222ENST00000474742 C22orf39Q6P5X5 142 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 CEMP1Q6PRD7 247 aaPredicted RBP0.48□□□□□ -2.33
HDAC9-222ENST00000474742 SPINT4Q6UDR6 99 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 SCIMPQ6UWF3 145 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 UNQ5815/PRO19632Q6UWF5 114 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 GLIPR1L1Q6UWM5 242 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 LYZL1Q6UWQ5 148 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 LYPD2Q6UXB3 125 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 IZUMO2Q6UXV1 221 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 CASC2Q6XLA1 102 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 Q6ZRU5 148 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 LCA10Q71F78 164 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 FAM19A3Q7Z5A8 133 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 PRNTQ86SH4 94 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 KTN1-AS1Q86SY8 53 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 GKN2Q86XP6 184 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 KRTAP13-1Q8IUC0 172 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 ZNF101Q8IZC7 436 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 LYPD1Q8N2G4 141 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 OSR2Q8N2R0 312 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 LRRC18Q8N456 261 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 C3orf22Q8N5N4 141 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 MIR7-3HGQ8N6C7 128 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 TEX29Q8N6K0 151 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 FAM216BQ8N7L0 139 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 SIGLECL1Q8N7X8 197 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 TMEM105Q8N8V8 129 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 C15orf56Q8N910 161 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 Q8N976 141 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 CNEP1R1Q8N9A8 125 aa0.48□□□□□ -2.33
HDAC9-222ENST00000474742 ZIC4Q8N9L1 334 aa0.48□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms