RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 IGHV3-48P01763 117 aa7.77□□□□□ -1.17
USP39-214ENST00000474572 TRGC2P03986 189 aa7.77□□□□□ -1.17
USP39-214ENST00000474572 S100A8P05109 93 aa7.77□□□□□ -1.17
USP39-214ENST00000474572 HIST1H2BJP06899 126 aa7.77□□□□□ -1.17
USP39-214ENST00000474572 OR10J4P0C629 311 aa7.77□□□□□ -1.17
USP39-214ENST00000474572 HOXA5P20719 270 aa7.77□□□□□ -1.17
USP39-214ENST00000474572 HIST1H2BOP23527 126 aa7.77□□□□□ -1.17
USP39-214ENST00000474572 HIST1H2BBP33778 126 aa7.77□□□□□ -1.17
USP39-214ENST00000474572 RPL35P42766 123 aaKnown RBP7.77□□□□□ -1.17
USP39-214ENST00000474572 HIST1H2BDP58876 126 aa7.77□□□□□ -1.17
USP39-214ENST00000474572 HIST1H2BCP62807 126 aa7.77□□□□□ -1.17
USP39-214ENST00000474572 UBE2L3P68036 154 aaKnown RBP7.77□□□□□ -1.17
USP39-214ENST00000474572 LCN2P80188 198 aa7.77□□□□□ -1.17
USP39-214ENST00000474572 FABP9Q0Z7S8 132 aa7.77□□□□□ -1.17
USP39-214ENST00000474572 FOXL1Q12952 345 aa7.77□□□□□ -1.17
USP39-214ENST00000474572 FXYD3Q14802 87 aa7.77□□□□□ -1.17
USP39-214ENST00000474572 HIST2H2BEQ16778 126 aa7.77□□□□□ -1.17
USP39-214ENST00000474572 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.77□□□□□ -1.17
USP39-214ENST00000474572 ASPHD1Q5U4P2 390 aa7.77□□□□□ -1.17
USP39-214ENST00000474572 KCNIP4Q6PIL6 250 aa7.77□□□□□ -1.17
USP39-214ENST00000474572 OCC1Q8TAD7 63 aa7.77□□□□□ -1.17
USP39-214ENST00000474572 HIST1H2BHQ93079 126 aa7.77□□□□□ -1.17
USP39-214ENST00000474572 IGF2BP2-AS1Q96M15 143 aa7.77□□□□□ -1.17
USP39-214ENST00000474572 HIST1H2BNQ99877 126 aa7.77□□□□□ -1.17
USP39-214ENST00000474572 HIST1H2BMQ99879 126 aa7.77□□□□□ -1.17
USP39-214ENST00000474572 PAXXQ9BUH6 204 aa7.77□□□□□ -1.17
USP39-214ENST00000474572 OR51M1Q9H341 326 aa7.77□□□□□ -1.17
USP39-214ENST00000474572 ATRXP46100 2492 aa7.77□□□□□ -1.17
USP39-214ENST00000474572 NBEAQ8NFP9 2946 aa7.77□□□□□ -1.17
USP39-214ENST00000474572 IGLV11-55A0A075B6I3 123 aa7.76□□□□□ -1.17
USP39-214ENST00000474572 TRAV9-1A0A075B6T8 112 aa7.76□□□□□ -1.17
USP39-214ENST00000474572 NDUFS8O00217 210 aa7.76□□□□□ -1.17
USP39-214ENST00000474572 IGLV2-8P01709 118 aa7.76□□□□□ -1.17
USP39-214ENST00000474572 CRYBB3P26998 211 aa7.76□□□□□ -1.17
USP39-214ENST00000474572 FAM3BP58499 235 aaPredicted RBP7.76□□□□□ -1.17
USP39-214ENST00000474572 TAS2R60P59551 318 aa7.76□□□□□ -1.17
USP39-214ENST00000474572 NDPQ00604 133 aa7.76□□□□□ -1.17
USP39-214ENST00000474572 LINC00305Q7Z4B0 112 aa7.76□□□□□ -1.17
USP39-214ENST00000474572 TTC9CQ8N5M4 171 aa7.76□□□□□ -1.17
USP39-214ENST00000474572 OR10G8Q8NGN5 311 aa7.76□□□□□ -1.17
USP39-214ENST00000474572 TMEM190Q8WZ59 177 aa7.76□□□□□ -1.17
USP39-214ENST00000474572 FRZBQ92765 325 aa7.76□□□□□ -1.17
USP39-214ENST00000474572 PLXNB1O43157 2135 aa7.75□□□□□ -1.17
USP39-214ENST00000474572 ABCA4P78363 2273 aa7.75□□□□□ -1.17
USP39-214ENST00000474572 A0A1W2PRD5 423 aa7.75□□□□□ -1.17
USP39-214ENST00000474572 A0A1W2PRF3 423 aa7.75□□□□□ -1.17
USP39-214ENST00000474572 A0A1W2PRM7 423 aa7.75□□□□□ -1.17
USP39-214ENST00000474572 ZNF98A6NK75 572 aa7.75□□□□□ -1.17
USP39-214ENST00000474572 HYPMO75409 117 aa7.75□□□□□ -1.17
USP39-214ENST00000474572 CNIH1O95406 144 aa7.75□□□□□ -1.17
USP39-214ENST00000474572 GCGP01275 180 aa7.75□□□□□ -1.17
USP39-214ENST00000474572 IGKV1-17P01599 117 aa7.75□□□□□ -1.17
USP39-214ENST00000474572 HLA-DRB1P01911 266 aa7.75□□□□□ -1.17
USP39-214ENST00000474572 TRGC1P0CF51 173 aa7.75□□□□□ -1.17
USP39-214ENST00000474572 APELAP0DMC3 54 aa7.75□□□□□ -1.17
USP39-214ENST00000474572 PYYP10082 97 aa7.75□□□□□ -1.17
USP39-214ENST00000474572 GP9P14770 177 aa7.75□□□□□ -1.17
USP39-214ENST00000474572 CDX1P47902 265 aaPredicted RBP7.75□□□□□ -1.17
USP39-214ENST00000474572 LGALS4P56470 323 aa7.75□□□□□ -1.17
USP39-214ENST00000474572 SUMO1P63165 101 aaKnown RBP7.75□□□□□ -1.17
USP39-214ENST00000474572 CX3CL1P78423 397 aa7.75□□□□□ -1.17
USP39-214ENST00000474572 CENPWQ5EE01 88 aa7.75□□□□□ -1.17
USP39-214ENST00000474572 ZNF329Q86UD4 541 aa7.75□□□□□ -1.17
USP39-214ENST00000474572 Q8N9W7 124 aa7.75□□□□□ -1.17
USP39-214ENST00000474572 NECAP1Q8NC96 275 aa7.75□□□□□ -1.17
USP39-214ENST00000474572 C10orf105Q8TEF2 133 aa7.75□□□□□ -1.17
USP39-214ENST00000474572 ARPC1AQ92747 370 aa7.75□□□□□ -1.17
USP39-214ENST00000474572 FANCD2OSQ96PS1 177 aa7.75□□□□□ -1.17
USP39-214ENST00000474572 SPOCK3Q9BQ16 436 aa7.75□□□□□ -1.17
USP39-214ENST00000474572 LPAR2Q9HBW0 351 aa7.75□□□□□ -1.17
USP39-214ENST00000474572 IL36BQ9NZH7 164 aa7.75□□□□□ -1.17
USP39-214ENST00000474572 MRPL27Q9P0M9 148 aaKnown RBP7.75□□□□□ -1.17
USP39-214ENST00000474572 TMEM14CQ9P0S9 112 aa7.75□□□□□ -1.17
USP39-214ENST00000474572 CDC42EP3Q9UKI2 254 aa7.75□□□□□ -1.17
USP39-214ENST00000474572 COL6A6A6NMZ7 2263 aa7.75□□□□□ -1.17
USP39-214ENST00000474572 SPTA1P02549 2419 aa7.74□□□□□ -1.17
USP39-214ENST00000474572 SMG1Q96Q15 3661 aaKnown RBP7.74□□□□□ -1.17
USP39-214ENST00000474572 IGHV7-81A0A0B4J1V7 117 aa7.74□□□□□ -1.17
USP39-214ENST00000474572 A0A1W2PPQ1 181 aa7.74□□□□□ -1.17
USP39-214ENST00000474572 HELTA6NFD8 242 aa7.74□□□□□ -1.17
USP39-214ENST00000474572 PPP5D1E7EU14 171 aa7.74□□□□□ -1.17
USP39-214ENST00000474572 TOMM40O96008 361 aa7.74□□□□□ -1.17
USP39-214ENST00000474572 FABP1P07148 127 aa7.74□□□□□ -1.17
USP39-214ENST00000474572 SMIM6P0DI80 62 aa7.74□□□□□ -1.17
USP39-214ENST00000474572 PSG1P11464 419 aa7.74□□□□□ -1.17
USP39-214ENST00000474572 TMEM11P17152 192 aa7.74□□□□□ -1.17
USP39-214ENST00000474572 CD24P25063 80 aa7.74□□□□□ -1.17
USP39-214ENST00000474572 AKR1D1P51857 326 aa7.74□□□□□ -1.17
USP39-214ENST00000474572 RPL15P61313 204 aaKnown RBP7.74□□□□□ -1.17
USP39-214ENST00000474572 PAX8Q06710 450 aa7.74□□□□□ -1.17
USP39-214ENST00000474572 HES1Q14469 280 aa7.74□□□□□ -1.17
USP39-214ENST00000474572 COA6Q5JTJ3 125 aaKnown RBP7.74□□□□□ -1.17
USP39-214ENST00000474572 ACTL10Q5JWF8 245 aa7.74□□□□□ -1.17
USP39-214ENST00000474572 OR1B1Q8NGR6 318 aa7.74□□□□□ -1.17
USP39-214ENST00000474572 PIMREGQ9BSJ6 248 aa7.74□□□□□ -1.17
USP39-214ENST00000474572 OSTCQ9NRP0 149 aa7.74□□□□□ -1.17
USP39-214ENST00000474572 AURKAIP1Q9NWT8 199 aaPredicted RBP7.74□□□□□ -1.17
USP39-214ENST00000474572 C1RLQ9NZP8 487 aa7.74□□□□□ -1.17
USP39-214ENST00000474572 TRAV30A0A087WSZ9 112 aa7.73□□□□□ -1.17
USP39-214ENST00000474572 IGHV3-21A0A0B4J1V1 117 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms