RNA–Protein interactions for RNA: ENST00000474568.5

ITGB1-210, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-210ENST00000474568 C4orf46Q504U0 113 aa11.94□□□□□ -0.5
ITGB1-210ENST00000474568 LINC00322Q6ZN03 302 aaPredicted RBP11.94□□□□□ -0.5
ITGB1-210ENST00000474568 NOXA1Q86UR1 476 aa11.94□□□□□ -0.5
ITGB1-210ENST00000474568 WFDC3Q8IUB2 231 aa11.94□□□□□ -0.5
ITGB1-210ENST00000474568 LILRB2Q8N423 598 aa11.94□□□□□ -0.5
ITGB1-210ENST00000474568 NPIPB3Q92617 1050 aa11.94□□□□□ -0.5
ITGB1-210ENST00000474568 CITED4Q96RK1 184 aa11.94□□□□□ -0.5
ITGB1-210ENST00000474568 C7orf50Q9BRJ6 194 aaKnown RBP11.94□□□□□ -0.5
ITGB1-210ENST00000474568 TMED3Q9Y3Q3 217 aa11.94□□□□□ -0.5
ITGB1-210ENST00000474568 U3KQ87 197 aa11.94□□□□□ -0.5
ITGB1-210ENST00000474568 OR4C46A6NHA9 309 aa11.93□□□□□ -0.5
ITGB1-210ENST00000474568 LYRM1O43325 122 aa11.93□□□□□ -0.5
ITGB1-210ENST00000474568 IGLC1P0CG04 106 aa11.93□□□□□ -0.5
ITGB1-210ENST00000474568 UBE2MP61081 183 aaKnown RBP11.93□□□□□ -0.5
ITGB1-210ENST00000474568 DHRS2Q13268 280 aa11.93□□□□□ -0.5
ITGB1-210ENST00000474568 ODF3L2Q3SX64 289 aa11.93□□□□□ -0.5
ITGB1-210ENST00000474568 ETFRF1Q6IPR1 90 aa11.93□□□□□ -0.5
ITGB1-210ENST00000474568 TCF24Q7RTU0 167 aa11.93□□□□□ -0.5
ITGB1-210ENST00000474568 LYG2Q86SG7 212 aa11.93□□□□□ -0.5
ITGB1-210ENST00000474568 OR1S2Q8NGQ3 325 aa11.93□□□□□ -0.5
ITGB1-210ENST00000474568 TRAV30A0A087WSZ9 112 aa11.92□□□□□ -0.5
ITGB1-210ENST00000474568 MPTX1A8MV57 137 aa11.92□□□□□ -0.5
ITGB1-210ENST00000474568 WRBO00258 174 aa11.92□□□□□ -0.5
ITGB1-210ENST00000474568 DFFBO76075 338 aa11.92□□□□□ -0.5
ITGB1-210ENST00000474568 RPL11P62913 178 aaKnown RBP11.92□□□□□ -0.5
ITGB1-210ENST00000474568 COQ8AQ8NI60 647 aa11.92□□□□□ -0.5
ITGB1-210ENST00000474568 METTL26Q96S19 204 aa11.92□□□□□ -0.5
ITGB1-210ENST00000474568 A6NHS1 94 aa11.91□□□□□ -0.5
ITGB1-210ENST00000474568 SLC25A6P12236 298 aa11.91□□□□□ -0.5
ITGB1-210ENST00000474568 NPPCP23582 126 aa11.91□□□□□ -0.5
ITGB1-210ENST00000474568 BMI1P35226 326 aa11.91□□□□□ -0.5
ITGB1-210ENST00000474568 ZNF124Q15973 351 aa11.91□□□□□ -0.5
ITGB1-210ENST00000474568 FAM90A2PQ658T7 463 aa11.91□□□□□ -0.5
ITGB1-210ENST00000474568 Q8WTZ3 238 aa11.91□□□□□ -0.5
ITGB1-210ENST00000474568 GGTLC1Q9BX51 225 aa11.91□□□□□ -0.5
ITGB1-210ENST00000474568 C20orf85Q9H1P6 137 aa11.91□□□□□ -0.5
ITGB1-210ENST00000474568 VSIRQ9H7M9 311 aa11.91□□□□□ -0.5
ITGB1-210ENST00000474568 TRAV6A0A075B6T7 132 aa11.9□□□□□ -0.5
ITGB1-210ENST00000474568 LOC102724200A0A096LPH7 203 aaPredicted RBP11.9□□□□□ -0.5
ITGB1-210ENST00000474568 FAM90A26D6RGX4 464 aa11.9□□□□□ -0.5
ITGB1-210ENST00000474568 H3BP45 60 aa11.9□□□□□ -0.5
ITGB1-210ENST00000474568 SYNGR2O43760 224 aa11.9□□□□□ -0.5
ITGB1-210ENST00000474568 MED6O75586 246 aa11.9□□□□□ -0.5
ITGB1-210ENST00000474568 APRG1Q8IVJ8 170 aa11.9□□□□□ -0.5
ITGB1-210ENST00000474568 SLC35E1Q96K37 410 aa11.9□□□□□ -0.5
ITGB1-210ENST00000474568 DNAH7Q8WXX0 4024 aa11.9□□□□□ -0.5
ITGB1-210ENST00000474568 DNASE2O00115 360 aaPredicted RBP11.89□□□□□ -0.51
ITGB1-210ENST00000474568 IFNA21P01568 189 aa11.89□□□□□ -0.51
ITGB1-210ENST00000474568 IL4P05112 153 aa11.89□□□□□ -0.51
ITGB1-210ENST00000474568 RPL35AP18077 110 aaKnown RBP11.89□□□□□ -0.51
ITGB1-210ENST00000474568 YPEL3P61236 119 aaPredicted RBP11.89□□□□□ -0.51
ITGB1-210ENST00000474568 POLR2GP62487 172 aaKnown RBP eCLIP11.89□□□□□ -0.51
ITGB1-210ENST00000474568 RAB11AP62491 216 aa11.89□□□□□ -0.51
ITGB1-210ENST00000474568 CCDC32Q9BV29 185 aa11.89□□□□□ -0.51
ITGB1-210ENST00000474568 TMEM231Q9H6L2 316 aa11.89□□□□□ -0.51
ITGB1-210ENST00000474568 RABAC1Q9UI14 185 aa11.89□□□□□ -0.51
ITGB1-210ENST00000474568 STAB2Q8WWQ8 2551 aa11.89□□□□□ -0.51
ITGB1-210ENST00000474568 ZFP92A6NM28 416 aa11.88□□□□□ -0.51
ITGB1-210ENST00000474568 SCGB1D2O95969 90 aa11.88□□□□□ -0.51
ITGB1-210ENST00000474568 TCRBP04435 133 aa11.88□□□□□ -0.51
ITGB1-210ENST00000474568 RD3LP0DJH9 198 aa11.88□□□□□ -0.51
ITGB1-210ENST00000474568 CRYBB3P26998 211 aa11.88□□□□□ -0.51
ITGB1-210ENST00000474568 P2RY1P47900 373 aa11.88□□□□□ -0.51
ITGB1-210ENST00000474568 PAFAH1B2P68402 229 aa11.88□□□□□ -0.51
ITGB1-210ENST00000474568 GAMTQ14353 236 aa11.88□□□□□ -0.51
ITGB1-210ENST00000474568 USF2Q15853 346 aaPredicted RBP11.88□□□□□ -0.51
ITGB1-210ENST00000474568 SPANXN5Q5MJ07 72 aa11.88□□□□□ -0.51
ITGB1-210ENST00000474568 NARS2Q96I59 477 aaKnown RBP11.88□□□□□ -0.51
ITGB1-210ENST00000474568 CIB3Q96Q77 187 aaPredicted RBP11.88□□□□□ -0.51
ITGB1-210ENST00000474568 MS4A6AQ9H2W1 248 aa11.88□□□□□ -0.51
ITGB1-210ENST00000474568 TENM3Q9P273 2699 aa11.88□□□□□ -0.51
ITGB1-210ENST00000474568 A0A1W2PS18 150 aa11.87□□□□□ -0.51
ITGB1-210ENST00000474568 CCSO14618 274 aa11.87□□□□□ -0.51
ITGB1-210ENST00000474568 TOMM40O96008 361 aa11.87□□□□□ -0.51
ITGB1-210ENST00000474568 HNRNPCP07910 306 aaKnown RBP eCLIP11.87□□□□□ -0.516e-6■■■■□ 19.3
ITGB1-210ENST00000474568 GPX4P36969 197 aaPredicted RBP11.87□□□□□ -0.51
ITGB1-210ENST00000474568 ATP5IP56385 69 aaPredicted RBP11.87□□□□□ -0.51
ITGB1-210ENST00000474568 ZNF90Q03938 601 aa11.87□□□□□ -0.51
ITGB1-210ENST00000474568 FAM24BQ8N5W8 94 aa11.87□□□□□ -0.51
ITGB1-210ENST00000474568 STXBP6Q8NFX7 210 aa11.87□□□□□ -0.51
ITGB1-210ENST00000474568 OR51G1Q8NGK1 321 aa11.87□□□□□ -0.51
ITGB1-210ENST00000474568 MUC7Q8TAX7 377 aa11.87□□□□□ -0.51
ITGB1-210ENST00000474568 S100ZQ8WXG8 99 aa11.87□□□□□ -0.51
ITGB1-210ENST00000474568 SEC22CQ9BRL7 303 aa11.87□□□□□ -0.51
ITGB1-210ENST00000474568 PBDC1Q9BVG4 233 aa11.87□□□□□ -0.51
ITGB1-210ENST00000474568 MAP6D1Q9H9H5 199 aa11.87□□□□□ -0.51
ITGB1-210ENST00000474568 NUDT15Q9NV35 164 aa11.87□□□□□ -0.51
ITGB1-210ENST00000474568 IGKV1D-37A0A075B6S9 117 aa11.86□□□□□ -0.51
ITGB1-210ENST00000474568 SSSCA1O60232 199 aa11.86□□□□□ -0.51
ITGB1-210ENST00000474568 PSG1P11464 419 aa11.86□□□□□ -0.51
ITGB1-210ENST00000474568 NKX2-1P43699 371 aaPredicted RBP11.86□□□□□ -0.51
ITGB1-210ENST00000474568 RPP30P78346 268 aaKnown RBP11.86□□□□□ -0.51
ITGB1-210ENST00000474568 OR2F1Q13607 317 aa11.86□□□□□ -0.51
ITGB1-210ENST00000474568 IAH1Q2TAA2 248 aaPredicted RBP11.86□□□□□ -0.51
ITGB1-210ENST00000474568 ZFAND6Q6FIF0 208 aa11.86□□□□□ -0.51
ITGB1-210ENST00000474568 OR4D5Q8NGN0 318 aa11.86□□□□□ -0.51
ITGB1-210ENST00000474568 MITD1Q8WV92 249 aa11.86□□□□□ -0.51
ITGB1-210ENST00000474568 EDA2RQ9HAV5 297 aa11.86□□□□□ -0.51
ITGB1-210ENST00000474568 GSKIPQ9P0R6 139 aa11.86□□□□□ -0.51
ITGB1-210ENST00000474568 TBC1D24Q9ULP9 559 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms