RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 LINC00869P0C866 280 aa2.66□□□□□ -1.98
BRCA1-212ENST00000473961 IMPA1P29218 277 aa2.66□□□□□ -1.98
BRCA1-212ENST00000473961 RPL12P30050 165 aaKnown RBP2.66□□□□□ -1.98
BRCA1-212ENST00000473961 RPS11P62280 158 aaKnown RBP eCLIP2.66□□□□□ -1.98
BRCA1-212ENST00000473961 GRB2P62993 217 aaKnown RBP2.66□□□□□ -1.98
BRCA1-212ENST00000473961 PPP1R1AQ13522 171 aa2.66□□□□□ -1.98
BRCA1-212ENST00000473961 ENDOGQ14249 297 aaKnown RBP2.66□□□□□ -1.98
BRCA1-212ENST00000473961 BATFQ16520 125 aa2.66□□□□□ -1.98
BRCA1-212ENST00000473961 KRTAP13-3Q3SY46 172 aa2.66□□□□□ -1.98
BRCA1-212ENST00000473961 COX19Q49B96 90 aa2.66□□□□□ -1.98
BRCA1-212ENST00000473961 CLEC18BQ6UXF7 455 aa2.66□□□□□ -1.98
BRCA1-212ENST00000473961 C20orf196Q8IYI0 205 aa2.66□□□□□ -1.98
BRCA1-212ENST00000473961 SLC25A29Q8N8R3 303 aa2.66□□□□□ -1.98
BRCA1-212ENST00000473961 CDRT4Q8N9R6 151 aa2.66□□□□□ -1.98
BRCA1-212ENST00000473961 OR2Z1Q8NG97 314 aa2.66□□□□□ -1.98
BRCA1-212ENST00000473961 OR4B1Q8NGF8 309 aa2.66□□□□□ -1.98
BRCA1-212ENST00000473961 OR52L1Q8NGH7 329 aa2.66□□□□□ -1.98
BRCA1-212ENST00000473961 OR2T27Q8NH04 317 aa2.66□□□□□ -1.98
BRCA1-212ENST00000473961 RPS4Y2Q8TD47 263 aa2.66□□□□□ -1.98
BRCA1-212ENST00000473961 GPR119Q8TDV5 335 aa2.66□□□□□ -1.98
BRCA1-212ENST00000473961 OR5P2Q8WZ92 322 aa2.66□□□□□ -1.98
BRCA1-212ENST00000473961 RBMXL1Q96E39 390 aaKnown RBP2.66□□□□□ -1.98
BRCA1-212ENST00000473961 REEP6Q96HR9 211 aa2.66□□□□□ -1.98
BRCA1-212ENST00000473961 LINC00167Q96N53 147 aa2.66□□□□□ -1.98
BRCA1-212ENST00000473961 VAMP8Q9BV40 100 aa2.66□□□□□ -1.98
BRCA1-212ENST00000473961 EBPLQ9BY08 206 aa2.66□□□□□ -1.98
BRCA1-212ENST00000473961 BCL2L10Q9HD36 194 aa2.66□□□□□ -1.98
BRCA1-212ENST00000473961 CMC2Q9NRP2 79 aa2.66□□□□□ -1.98
BRCA1-212ENST00000473961 UQCR10Q9UDW1 63 aa2.66□□□□□ -1.98
BRCA1-212ENST00000473961 FUT9Q9Y231 359 aa2.66□□□□□ -1.98
BRCA1-212ENST00000473961 LAMTOR2Q9Y2Q5 125 aa2.66□□□□□ -1.98
BRCA1-212ENST00000473961 MRPS16Q9Y3D3 137 aaKnown RBP2.66□□□□□ -1.98
BRCA1-212ENST00000473961 URGCP-MRPS24S4R325 110 aa2.66□□□□□ -1.98
BRCA1-212ENST00000473961 ZNF106Q9H2Y7 1883 aaKnown RBP2.66□□□□□ -1.98
BRCA1-212ENST00000473961 MGAMO43451 1857 aa2.65□□□□□ -1.98
BRCA1-212ENST00000473961 PLXNA3P51805 1871 aa2.65□□□□□ -1.98
BRCA1-212ENST00000473961 TRPM7Q96QT4 1865 aa2.65□□□□□ -1.98
BRCA1-212ENST00000473961 MAP1LC3B2A6NCE7 125 aa2.65□□□□□ -1.99
BRCA1-212ENST00000473961 OR4C45A6NMZ5 311 aa2.65□□□□□ -1.99
BRCA1-212ENST00000473961 PIN1P1O15428 100 aa2.65□□□□□ -1.99
BRCA1-212ENST00000473961 YPEL1O60688 119 aa2.65□□□□□ -1.99
BRCA1-212ENST00000473961 RCBTB2O95199 551 aa2.65□□□□□ -1.99
BRCA1-212ENST00000473961 SFT2D2O95562 160 aa2.65□□□□□ -1.99
BRCA1-212ENST00000473961 IGLV3-25P01717 112 aa2.65□□□□□ -1.99
BRCA1-212ENST00000473961 PRH1P02810 166 aa2.65□□□□□ -1.99
BRCA1-212ENST00000473961 CSN2P05814 226 aa2.65□□□□□ -1.99
BRCA1-212ENST00000473961 PFN1P07737 140 aaKnown RBP2.65□□□□□ -1.99
BRCA1-212ENST00000473961 MPC1LP0DKB6 136 aa2.65□□□□□ -1.99
BRCA1-212ENST00000473961 SMIM10L2AP0DMW4 78 aa2.65□□□□□ -1.99
BRCA1-212ENST00000473961 SMIM10L2BP0DMW5 78 aa2.65□□□□□ -1.99
BRCA1-212ENST00000473961 PTHLHP12272 177 aa2.65□□□□□ -1.99
BRCA1-212ENST00000473961 GZMHP20718 246 aa2.65□□□□□ -1.99
BRCA1-212ENST00000473961 CSRP1P21291 193 aaKnown RBP2.65□□□□□ -1.99
BRCA1-212ENST00000473961 S100A7P31151 101 aa2.65□□□□□ -1.99
BRCA1-212ENST00000473961 LGALS7P47929 136 aa2.65□□□□□ -1.99
BRCA1-212ENST00000473961 EMP2P54851 167 aa2.65□□□□□ -1.99
BRCA1-212ENST00000473961 TPPP2P59282 170 aa2.65□□□□□ -1.99
BRCA1-212ENST00000473961 TAS2R41P59536 307 aa2.65□□□□□ -1.99
BRCA1-212ENST00000473961 FKBP1AP62942 108 aaKnown RBP2.65□□□□□ -1.99
BRCA1-212ENST00000473961 BTN3A2P78410 334 aa2.65□□□□□ -1.99
BRCA1-212ENST00000473961 FOXF1Q12946 379 aa2.65□□□□□ -1.99
BRCA1-212ENST00000473961 IL15RAQ13261 267 aa2.65□□□□□ -1.99
BRCA1-212ENST00000473961 IHHQ14623 411 aa2.65□□□□□ -1.99
BRCA1-212ENST00000473961 MMDQ15546 238 aa2.65□□□□□ -1.99
BRCA1-212ENST00000473961 Q499Y3 187 aa2.65□□□□□ -1.99
BRCA1-212ENST00000473961 TMEM128Q5BJH2 165 aa2.65□□□□□ -1.99
BRCA1-212ENST00000473961 CLEC12AQ5QGZ9 265 aa2.65□□□□□ -1.99
BRCA1-212ENST00000473961 LDLRAD2Q5SZI1 272 aa2.65□□□□□ -1.99
BRCA1-212ENST00000473961 SAMD13Q5VXD3 122 aa2.65□□□□□ -1.99
BRCA1-212ENST00000473961 DPPA3Q6W0C5 159 aa2.65□□□□□ -1.99
BRCA1-212ENST00000473961 FAM231DQ6ZW35 169 aa2.65□□□□□ -1.99
BRCA1-212ENST00000473961 GLT6D1Q7Z4J2 308 aa2.65□□□□□ -1.99
BRCA1-212ENST00000473961 NIT1Q86X76 327 aa2.65□□□□□ -1.99
BRCA1-212ENST00000473961 ORMDL3Q8N138 153 aa2.65□□□□□ -1.99
BRCA1-212ENST00000473961 APCDD1LQ8NCL9 501 aa2.65□□□□□ -1.99
BRCA1-212ENST00000473961 OR4D11Q8NGI4 311 aa2.65□□□□□ -1.99
BRCA1-212ENST00000473961 OR2Y1Q8NGV0 311 aa2.65□□□□□ -1.99
BRCA1-212ENST00000473961 OR8S1Q8NH09 359 aa2.65□□□□□ -1.99
BRCA1-212ENST00000473961 C2orf15Q8WU43 125 aaKnown RBP2.65□□□□□ -1.99
BRCA1-212ENST00000473961 AQP3Q92482 292 aa2.65□□□□□ -1.99
BRCA1-212ENST00000473961 GPR146Q96CH1 333 aa2.65□□□□□ -1.99
BRCA1-212ENST00000473961 ZMYND19Q96E35 227 aaPredicted RBP2.65□□□□□ -1.99
BRCA1-212ENST00000473961 LINC00477Q96M19 166 aa2.65□□□□□ -1.99
BRCA1-212ENST00000473961 PRAP1Q96NZ9 151 aa2.65□□□□□ -1.99
BRCA1-212ENST00000473961 YPEL2Q96QA6 119 aa2.65□□□□□ -1.99
BRCA1-212ENST00000473961 TBX5Q99593 518 aa2.65□□□□□ -1.99
BRCA1-212ENST00000473961 SPIN2AQ99865 258 aa2.65□□□□□ -1.99
BRCA1-212ENST00000473961 SPIN2BQ9BPZ2 258 aa2.65□□□□□ -1.99
BRCA1-212ENST00000473961 MAP1LC3BQ9GZQ8 125 aa2.65□□□□□ -1.99
BRCA1-212ENST00000473961 CST11Q9H112 138 aa2.65□□□□□ -1.99
BRCA1-212ENST00000473961 CXCL16Q9H2A7 254 aa2.65□□□□□ -1.99
BRCA1-212ENST00000473961 TMEM106BQ9NUM4 274 aa2.65□□□□□ -1.99
BRCA1-212ENST00000473961 NAT8Q9UHE5 227 aa2.65□□□□□ -1.99
BRCA1-212ENST00000473961 C14orf166Q9Y224 244 aaKnown RBP2.65□□□□□ -1.99
BRCA1-212ENST00000473961 SBF1O95248 1867 aa2.65□□□□□ -1.99
BRCA1-212ENST00000473961 TRAV1-1A0A0B4J248 108 aa2.64□□□□□ -1.99
BRCA1-212ENST00000473961 IGHV1-69-2A0A0G2JMI3 117 aa2.64□□□□□ -1.99
BRCA1-212ENST00000473961 RIIAD1A6NNX1 92 aa2.64□□□□□ -1.99
BRCA1-212ENST00000473961 CEACAM18A8MTB9 384 aa2.64□□□□□ -1.99
BRCA1-212ENST00000473961 TRAPPC2LH3BP13 241 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms