RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 GNG4P50150 75 aa4.45□□□□□ -1.7
RTF1-203ENST00000473214 RAB5CP51148 216 aa4.45□□□□□ -1.7
RTF1-203ENST00000473214 RBM11P57052 281 aaKnown RBP4.45□□□□□ -1.7
RTF1-203ENST00000473214 HERVK_113P61574 105 aa4.45□□□□□ -1.7
RTF1-203ENST00000473214 RPS11P62280 158 aaKnown RBP eCLIP4.45□□□□□ -1.7
RTF1-203ENST00000473214 CDK6Q00534 326 aa4.45□□□□□ -1.7
RTF1-203ENST00000473214 COL5A1-AS1Q5SY13 56 aa4.45□□□□□ -1.7
RTF1-203ENST00000473214 C9orf66Q5T8R8 295 aa4.45□□□□□ -1.7
RTF1-203ENST00000473214 GLT8D1Q68CQ7 371 aa4.45□□□□□ -1.7
RTF1-203ENST00000473214 EBLN2Q6P2I7 272 aa4.45□□□□□ -1.7
RTF1-203ENST00000473214 WDR86Q86TI4 376 aa4.45□□□□□ -1.7
RTF1-203ENST00000473214 ZNF709Q8N972 641 aa4.45□□□□□ -1.7
RTF1-203ENST00000473214 OR1J4Q8NGS1 313 aa4.45□□□□□ -1.7
RTF1-203ENST00000473214 MS4A6EQ96DS6 147 aa4.45□□□□□ -1.7
RTF1-203ENST00000473214 DERL3Q96Q80 235 aa4.45□□□□□ -1.7
RTF1-203ENST00000473214 MGLLQ99685 303 aa4.45□□□□□ -1.7
RTF1-203ENST00000473214 WDR61Q9GZS3 305 aaKnown RBP4.45□□□□□ -1.7
RTF1-203ENST00000473214 Q9H521 79 aa4.45□□□□□ -1.7
RTF1-203ENST00000473214 TAAR3PQ9P1P4 343 aa4.45□□□□□ -1.7
RTF1-203ENST00000473214 SCP2D1Q9UJQ7 156 aa4.45□□□□□ -1.7
RTF1-203ENST00000473214 SOX21Q9Y651 276 aaPredicted RBP4.45□□□□□ -1.7
RTF1-203ENST00000473214 BAZ2BQ9UIF8 2168 aaKnown RBP4.45□□□□□ -1.7
RTF1-203ENST00000473214 SPAG17Q6Q759 2223 aa4.45□□□□□ -1.7
RTF1-203ENST00000473214 ASCC3Q8N3C0 2202 aaKnown RBP4.45□□□□□ -1.7
RTF1-203ENST00000473214 KIF26AQ9ULI4 1882 aaPredicted RBP4.44□□□□□ -1.7
RTF1-203ENST00000473214 TRBV20OR9-2A0A075B6H5 130 aa4.44□□□□□ -1.7
RTF1-203ENST00000473214 TMEM212A6NML5 194 aa4.44□□□□□ -1.7
RTF1-203ENST00000473214 IFITM5A6NNB3 132 aa4.44□□□□□ -1.7
RTF1-203ENST00000473214 J3QQQ9 107 aa4.44□□□□□ -1.7
RTF1-203ENST00000473214 DNASE2O00115 360 aaPredicted RBP4.44□□□□□ -1.7
RTF1-203ENST00000473214 CCL16O15467 120 aa4.44□□□□□ -1.7
RTF1-203ENST00000473214 LYZL6O75951 148 aa4.44□□□□□ -1.7
RTF1-203ENST00000473214 DUSP14O95147 198 aaKnown RBP4.44□□□□□ -1.7
RTF1-203ENST00000473214 PAEPP09466 180 aa4.44□□□□□ -1.7
RTF1-203ENST00000473214 S100A2P29034 98 aa4.44□□□□□ -1.7
RTF1-203ENST00000473214 GUCA1AP43080 201 aaPredicted RBP4.44□□□□□ -1.7
RTF1-203ENST00000473214 CA7P43166 264 aa4.44□□□□□ -1.7
RTF1-203ENST00000473214 LINC00313P59037 77 aa4.44□□□□□ -1.7
RTF1-203ENST00000473214 EIF3IQ13347 325 aaKnown RBP4.44□□□□□ -1.7
RTF1-203ENST00000473214 TMEM241Q24JQ0 296 aa4.44□□□□□ -1.7
RTF1-203ENST00000473214 VMA21Q3ZAQ7 101 aa4.44□□□□□ -1.7
RTF1-203ENST00000473214 NHLRC3Q5JS37 347 aa4.44□□□□□ -1.7
RTF1-203ENST00000473214 TMEM244Q5VVB8 128 aa4.44□□□□□ -1.7
RTF1-203ENST00000473214 Q5XG85 94 aa4.44□□□□□ -1.7
RTF1-203ENST00000473214 GTF2H5Q6ZYL4 71 aa4.44□□□□□ -1.7
RTF1-203ENST00000473214 MARCH3Q86UD3 253 aa4.44□□□□□ -1.7
RTF1-203ENST00000473214 LRP11Q86VZ4 500 aa4.44□□□□□ -1.7
RTF1-203ENST00000473214 ZNF664Q8N3J9 261 aa4.44□□□□□ -1.7
RTF1-203ENST00000473214 C9orf62Q8N4C0 152 aa4.44□□□□□ -1.7
RTF1-203ENST00000473214 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.44□□□□□ -1.7
RTF1-203ENST00000473214 GPX7Q96SL4 187 aaPredicted RBP4.44□□□□□ -1.7
RTF1-203ENST00000473214 TIMM17AQ99595 171 aa4.44□□□□□ -1.7
RTF1-203ENST00000473214 SNHG12Q9BXW3 62 aa4.44□□□□□ -1.7
RTF1-203ENST00000473214 AICDAQ9GZX7 198 aa4.44□□□□□ -1.7
RTF1-203ENST00000473214 PARP12Q9H0J9 701 aaKnown RBP4.44□□□□□ -1.7
RTF1-203ENST00000473214 Q9H3A6 140 aa4.44□□□□□ -1.7
RTF1-203ENST00000473214 BOKQ9UMX3 212 aaPredicted RBP4.44□□□□□ -1.7
RTF1-203ENST00000473214 PROCRQ9UNN8 238 aa4.44□□□□□ -1.7
RTF1-203ENST00000473214 PDCD11Q14690 1871 aaKnown RBP4.43□□□□□ -1.7
RTF1-203ENST00000473214 DPRXA6NFQ7 191 aa4.43□□□□□ -1.7
RTF1-203ENST00000473214 MPTX1A8MV57 137 aa4.43□□□□□ -1.7
RTF1-203ENST00000473214 A8MWP6 167 aa4.43□□□□□ -1.7
RTF1-203ENST00000473214 LST1O00453 97 aa4.43□□□□□ -1.7
RTF1-203ENST00000473214 COX7A2LO14548 114 aa4.43□□□□□ -1.7
RTF1-203ENST00000473214 NPFFO15130 113 aa4.43□□□□□ -1.7
RTF1-203ENST00000473214 SCO1O75880 301 aa4.43□□□□□ -1.7
RTF1-203ENST00000473214 GABARAPO95166 117 aa4.43□□□□□ -1.7
RTF1-203ENST00000473214 APODP05090 189 aa4.43□□□□□ -1.7
RTF1-203ENST00000473214 IGLC6P0CF74 106 aa4.43□□□□□ -1.7
RTF1-203ENST00000473214 EGFEM1PQ0D2K5 195 aa4.43□□□□□ -1.7
RTF1-203ENST00000473214 ELOCQ15369 112 aa4.43□□□□□ -1.7
RTF1-203ENST00000473214 PRR4Q16378 134 aa4.43□□□□□ -1.7
RTF1-203ENST00000473214 MRPL2Q5T653 305 aaKnown RBP4.43□□□□□ -1.7
RTF1-203ENST00000473214 ZNF645Q8N7E2 425 aa4.43□□□□□ -1.7
RTF1-203ENST00000473214 OR2M3Q8NG83 312 aa4.43□□□□□ -1.7
RTF1-203ENST00000473214 MRPL30Q8TCC3 161 aaKnown RBP4.43□□□□□ -1.7
RTF1-203ENST00000473214 SPIN2AQ99865 258 aa4.43□□□□□ -1.7
RTF1-203ENST00000473214 SPIN2BQ9BPZ2 258 aa4.43□□□□□ -1.7
RTF1-203ENST00000473214 MRPL57Q9BQC6 102 aaKnown RBP4.43□□□□□ -1.7
RTF1-203ENST00000473214 AK3Q9UIJ7 227 aa4.43□□□□□ -1.7
RTF1-203ENST00000473214 SHROOM3Q8TF72 1996 aa4.43□□□□□ -1.7
RTF1-203ENST00000473214 PTPN13Q12923 2485 aa4.43□□□□□ -1.7
RTF1-203ENST00000473214 MUC22E2RYF6 1773 aaPredicted RBP4.42□□□□□ -1.7
RTF1-203ENST00000473214 A0A0D9SFI3 127 aa4.42□□□□□ -1.7
RTF1-203ENST00000473214 LY6G6EA0A0G2JKS1 128 aa4.42□□□□□ -1.7
RTF1-203ENST00000473214 A8MUN3 132 aa4.42□□□□□ -1.7
RTF1-203ENST00000473214 KRBOX1C9JBD0 128 aa4.42□□□□□ -1.7
RTF1-203ENST00000473214 UBE2L6O14933 153 aa4.42□□□□□ -1.7
RTF1-203ENST00000473214 ANKRD17O75179 2603 aaKnown RBP4.42□□□□□ -1.7
RTF1-203ENST00000473214 PGLYRP1O75594 196 aaPredicted RBP4.42□□□□□ -1.7
RTF1-203ENST00000473214 HLA-DQB1P01920 261 aa4.42□□□□□ -1.7
RTF1-203ENST00000473214 AMBPP02760 352 aa4.42□□□□□ -1.7
RTF1-203ENST00000473214 HLA-DPB1P04440 258 aa4.42□□□□□ -1.7
RTF1-203ENST00000473214 PGAM2P15259 253 aa4.42□□□□□ -1.7
RTF1-203ENST00000473214 ZNF83P51522 516 aa4.42□□□□□ -1.7
RTF1-203ENST00000473214 UBE2SQ16763 222 aa4.42□□□□□ -1.7
RTF1-203ENST00000473214 PRR30Q53SZ7 412 aaPredicted RBP4.42□□□□□ -1.7
RTF1-203ENST00000473214 PABPC1L2AQ5JQF8 200 aa4.42□□□□□ -1.7
RTF1-203ENST00000473214 FAAP20Q6NZ36 180 aa4.42□□□□□ -1.7
RTF1-203ENST00000473214 TMUB2Q71RG4 321 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 783.4 ms