RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 PLAUP00749 431 aa17.05■□□□□ 0.32
COL18A1-207ENST00000473212 APOA2P02652 100 aa17.05■□□□□ 0.32
COL18A1-207ENST00000473212 DLX1P56177 255 aa17.05■□□□□ 0.32
COL18A1-207ENST00000473212 COL5A1-AS1Q5SY13 56 aa17.05■□□□□ 0.32
COL18A1-207ENST00000473212 C10orf113Q5VZT2 155 aa17.05■□□□□ 0.32
COL18A1-207ENST00000473212 ZNF329Q86UD4 541 aa17.05■□□□□ 0.32
COL18A1-207ENST00000473212 BORCS7Q96B45 105 aa17.05■□□□□ 0.32
COL18A1-207ENST00000473212 FNDC4Q9H6D8 234 aaPredicted RBP17.05■□□□□ 0.32
COL18A1-207ENST00000473212 UQCR10Q9UDW1 63 aa17.05■□□□□ 0.32
COL18A1-207ENST00000473212 H0YJW9 148 aa17.05■□□□□ 0.32
COL18A1-207ENST00000473212 HYPMO75409 117 aa17.05■□□□□ 0.32
COL18A1-207ENST00000473212 IGLC2P0DOY2 106 aa17.05■□□□□ 0.32
COL18A1-207ENST00000473212 IGLC3P0DOY3 106 aa17.05■□□□□ 0.32
COL18A1-207ENST00000473212 PATE2Q6UY27 113 aa17.05■□□□□ 0.32
COL18A1-207ENST00000473212 SPACA3Q8IXA5 215 aa17.05■□□□□ 0.32
COL18A1-207ENST00000473212 NUP35Q8NFH5 326 aa17.05■□□□□ 0.32
COL18A1-207ENST00000473212 NUDT10Q8NFP7 164 aa17.05■□□□□ 0.32
COL18A1-207ENST00000473212 NPIPB3Q92617 1050 aa17.05■□□□□ 0.32
COL18A1-207ENST00000473212 MBD6Q96DN6 1003 aa17.05■□□□□ 0.32
COL18A1-207ENST00000473212 NUDT11Q96G61 164 aa17.05■□□□□ 0.32
COL18A1-207ENST00000473212 LRBAP50851 2863 aa17.04■□□□□ 0.32
COL18A1-207ENST00000473212 DCHS2Q6V1P9 2916 aa17.04■□□□□ 0.32
COL18A1-207ENST00000473212 CGB1A6NKQ9 187 aa17.04■□□□□ 0.32
COL18A1-207ENST00000473212 PEX7O00628 323 aa17.04■□□□□ 0.32
COL18A1-207ENST00000473212 REG1AP05451 166 aa17.04■□□□□ 0.32
COL18A1-207ENST00000473212 C19orf35Q6ZS72 473 aa17.04■□□□□ 0.32
COL18A1-207ENST00000473212 RITA1Q96K30 269 aa17.04■□□□□ 0.32
COL18A1-207ENST00000473212 TXN2Q99757 166 aa17.04■□□□□ 0.32
COL18A1-207ENST00000473212 SH3BGRL2Q9UJC5 107 aa17.04■□□□□ 0.32
COL18A1-207ENST00000473212 WT1-ASQ06250 92 aa17.04■□□□□ 0.32
COL18A1-207ENST00000473212 TBR1Q16650 682 aa17.04■□□□□ 0.32
COL18A1-207ENST00000473212 LCN12Q6JVE5 192 aa17.04■□□□□ 0.32
COL18A1-207ENST00000473212 Q6ZN92 141 aa17.04■□□□□ 0.32
COL18A1-207ENST00000473212 TPSG1Q9NRR2 321 aa17.04■□□□□ 0.32
COL18A1-207ENST00000473212 LINC00312Q9Y6C7 94 aa17.04■□□□□ 0.32
COL18A1-207ENST00000473212 GNG5P63218 68 aa17.03■□□□□ 0.32
COL18A1-207ENST00000473212 TNXAQ16473 311 aa17.03■□□□□ 0.32
COL18A1-207ENST00000473212 LYPD2Q6UXB3 125 aa17.03■□□□□ 0.32
COL18A1-207ENST00000473212 WFDC8Q8IUA0 241 aa17.03■□□□□ 0.32
COL18A1-207ENST00000473212 WIPF2Q8TF74 440 aaPredicted RBP17.03■□□□□ 0.32
COL18A1-207ENST00000473212 APELAP0DMC3 54 aa17.03■□□□□ 0.32
COL18A1-207ENST00000473212 BTF3P20290 206 aaKnown RBP17.03■□□□□ 0.32
COL18A1-207ENST00000473212 TNFSF4P23510 183 aa17.03■□□□□ 0.32
COL18A1-207ENST00000473212 GPR6P46095 362 aaPredicted RBP17.03■□□□□ 0.32
COL18A1-207ENST00000473212 MAJINQ3KP22 176 aa17.03■□□□□ 0.32
COL18A1-207ENST00000473212 TMEM30BQ3MIR4 351 aa17.03■□□□□ 0.32
COL18A1-207ENST00000473212 FAM231DQ6ZW35 169 aa17.03■□□□□ 0.32
COL18A1-207ENST00000473212 FLYWCH2Q96CP2 140 aaKnown RBP17.03■□□□□ 0.32
COL18A1-207ENST00000473212 GRAMD2BQ96HH9 432 aa17.03■□□□□ 0.32
COL18A1-207ENST00000473212 SGK494Q96LW2 274 aa17.03■□□□□ 0.32
COL18A1-207ENST00000473212 SSBP4Q9BWG4 385 aaPredicted RBP17.03■□□□□ 0.32
COL18A1-207ENST00000473212 CLEC7AQ9BXN2 247 aa17.03■□□□□ 0.32
COL18A1-207ENST00000473212 ZNF430Q9H8G1 570 aaPredicted RBP17.03■□□□□ 0.32
COL18A1-207ENST00000473212 RBMXL3Q8N7X1 1067 aaKnown RBP17.02■□□□□ 0.32
COL18A1-207ENST00000473212 H1FXQ92522 213 aaKnown RBP17.02■□□□□ 0.32
COL18A1-207ENST00000473212 MRPL27Q9P0M9 148 aaKnown RBP17.02■□□□□ 0.32
COL18A1-207ENST00000473212 CORTO00230 105 aa17.02■□□□□ 0.31
COL18A1-207ENST00000473212 TMEM200BQ69YZ2 307 aa17.02■□□□□ 0.31
COL18A1-207ENST00000473212 OR1L4Q8NGR5 311 aa17.02■□□□□ 0.31
COL18A1-207ENST00000473212 IGKV1D-37A0A075B6S9 117 aa17.01■□□□□ 0.31
COL18A1-207ENST00000473212 HNRNPA3P51991 378 aaKnown RBP17.01■□□□□ 0.31
COL18A1-207ENST00000473212 TEX36Q5VZQ5 186 aa17.01■□□□□ 0.31
COL18A1-207ENST00000473212 STPG4Q8N801 248 aa17.01■□□□□ 0.31
COL18A1-207ENST00000473212 OR5AN1Q8NGI8 311 aa17.01■□□□□ 0.31
COL18A1-207ENST00000473212 FXYD5Q96DB9 178 aa17.01■□□□□ 0.31
COL18A1-207ENST00000473212 SVEP1Q4LDE5 3571 aa17.01■□□□□ 0.31
COL18A1-207ENST00000473212 IGHV3-72A0A0B4J1Y9 119 aa17.01■□□□□ 0.31
COL18A1-207ENST00000473212 TCRBV4S1A1TA0A5B7 111 aa17.01■□□□□ 0.31
COL18A1-207ENST00000473212 CAMPP49913 170 aa17.01■□□□□ 0.31
COL18A1-207ENST00000473212 TMEM177Q53S58 311 aa17.01■□□□□ 0.31
COL18A1-207ENST00000473212 RASL11AQ6T310 242 aa17.01■□□□□ 0.31
COL18A1-207ENST00000473212 GAL3ST2Q9H3Q3 398 aa17.01■□□□□ 0.31
COL18A1-207ENST00000473212 A0A1W2PN81 502 aa17■□□□□ 0.31
COL18A1-207ENST00000473212 BPIFB3P59826 476 aa17■□□□□ 0.31
COL18A1-207ENST00000473212 ADIPOQQ15848 244 aa17■□□□□ 0.31
COL18A1-207ENST00000473212 ZNF841Q6ZN19 808 aa17■□□□□ 0.31
COL18A1-207ENST00000473212 Q6ZS92 163 aa17■□□□□ 0.31
COL18A1-207ENST00000473212 C11orf42Q8N5U0 333 aa17■□□□□ 0.31
COL18A1-207ENST00000473212 HIGD1CA8MV81 97 aa17■□□□□ 0.31
COL18A1-207ENST00000473212 HSBP1O75506 76 aa17■□□□□ 0.31
COL18A1-207ENST00000473212 FSTL3O95633 263 aa17■□□□□ 0.31
COL18A1-207ENST00000473212 C3orf36Q3SXR2 165 aa17■□□□□ 0.31
COL18A1-207ENST00000473212 CCL17Q92583 94 aa17■□□□□ 0.31
COL18A1-207ENST00000473212 LINC00614P0C842 121 aa16.99■□□□□ 0.31
COL18A1-207ENST00000473212 LINC00305Q7Z4B0 112 aa16.99■□□□□ 0.31
COL18A1-207ENST00000473212 TMEM167AQ8TBQ9 72 aa16.99■□□□□ 0.31
COL18A1-207ENST00000473212 ZFP30Q9Y2G7 519 aa16.99■□□□□ 0.31
COL18A1-207ENST00000473212 LAMTOR2Q9Y2Q5 125 aa16.99■□□□□ 0.31
COL18A1-207ENST00000473212 IGHV3-21A0A0B4J1V1 117 aa16.99■□□□□ 0.31
COL18A1-207ENST00000473212 NKX6-3A6NJ46 265 aa16.99■□□□□ 0.31
COL18A1-207ENST00000473212 CRYABP02511 175 aaKnown RBP16.99■□□□□ 0.31
COL18A1-207ENST00000473212 BLNKQ8WV28 456 aa16.99■□□□□ 0.31
COL18A1-207ENST00000473212 ZNF318Q5VUA4 2279 aa16.99■□□□□ 0.31
COL18A1-207ENST00000473212 VWC2LB2RUY7 222 aa16.98■□□□□ 0.31
COL18A1-207ENST00000473212 INS-IGF2F8WCM5 200 aa16.98■□□□□ 0.31
COL18A1-207ENST00000473212 M0R2Z0 102 aa16.98■□□□□ 0.31
COL18A1-207ENST00000473212 DMRTA1Q5VZB9 504 aa16.98■□□□□ 0.31
COL18A1-207ENST00000473212 RNASEKQ6P5S7 137 aaKnown RBP16.98■□□□□ 0.31
COL18A1-207ENST00000473212 OR4C13Q8NGP0 309 aa16.98■□□□□ 0.31
COL18A1-207ENST00000473212 OR10X1Q8NGY0 326 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms