RNA–Protein interactions for RNA: ENST00000471825.1

PITPNB-208, Transcript of phosphatidylinositol transfer protein beta, human

TSL 2

Gene PITPNB, Length 766 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PITPNB-208	ENST00000471825	USF2	Q15853	346 aa	Predicted RBP	13.97	□□□□□ -0.17
PITPNB-208	ENST00000471825		Q6ZRM9	215 aa		13.97	□□□□□ -0.17
PITPNB-208	ENST00000471825	UBE2DNL	Q8IWF7	75 aa		13.97	□□□□□ -0.17
PITPNB-208	ENST00000471825	C1QTNF4	Q9BXJ3	329 aa		13.97	□□□□□ -0.17
PITPNB-208	ENST00000471825	PLA2G2E	Q9NZK7	142 aa		13.97	□□□□□ -0.17
PITPNB-208	ENST00000471825	COMMD3	Q9UBI1	195 aa		13.97	□□□□□ -0.17
PITPNB-208	ENST00000471825	TRAV30	A0A087WSZ9	112 aa		13.96	□□□□□ -0.17
PITPNB-208	ENST00000471825	C3orf85	A0A1B0GTC6	90 aa		13.96	□□□□□ -0.17
PITPNB-208	ENST00000471825	SCGB2A1	O75556	95 aa		13.96	□□□□□ -0.17
PITPNB-208	ENST00000471825	IFNA21	P01568	189 aa		13.96	□□□□□ -0.17
PITPNB-208	ENST00000471825	SPART-AS1	P0CW21	52 aa		13.96	□□□□□ -0.17
PITPNB-208	ENST00000471825	RND2	P52198	227 aa		13.96	□□□□□ -0.17
PITPNB-208	ENST00000471825	NUTF2	P61970	127 aa	Known RBP	13.96	□□□□□ -0.17
PITPNB-208	ENST00000471825	TRIM16L	Q309B1	348 aa		13.96	□□□□□ -0.17
PITPNB-208	ENST00000471825	PRSS54	Q6PEW0	395 aa		13.96	□□□□□ -0.17
PITPNB-208	ENST00000471825	ZNF705A	Q6ZN79	300 aa	Predicted RBP	13.96	□□□□□ -0.17
PITPNB-208	ENST00000471825		Q8WTZ3	238 aa		13.96	□□□□□ -0.17
PITPNB-208	ENST00000471825		Q9H521	79 aa		13.96	□□□□□ -0.17
PITPNB-208	ENST00000471825	SCPEP1	Q9HB40	452 aa		13.96	□□□□□ -0.17
PITPNB-208	ENST00000471825	IGHV3OR16-12	A0A075B7B8	117 aa		13.95	□□□□□ -0.18
PITPNB-208	ENST00000471825	IGKV3-20	P01619	116 aa		13.95	□□□□□ -0.18
PITPNB-208	ENST00000471825	AP2S1	P53680	142 aa	Predicted RBP	13.95	□□□□□ -0.18
PITPNB-208	ENST00000471825	SNRPD3	P62318	126 aa	Known RBP	13.95	□□□□□ -0.18
PITPNB-208	ENST00000471825	RNASE12	Q5GAN4	147 aa	Known RBP	13.95	□□□□□ -0.18
PITPNB-208	ENST00000471825	GDF5OS	Q5U4N7	250 aa		13.95	□□□□□ -0.18
PITPNB-208	ENST00000471825	LHFPL1	Q86WI0	220 aa		13.95	□□□□□ -0.18
PITPNB-208	ENST00000471825	OR1S2	Q8NGQ3	325 aa		13.95	□□□□□ -0.18
PITPNB-208	ENST00000471825	SMIM31	A0A1B0GVY4	71 aa		13.94	□□□□□ -0.18
PITPNB-208	ENST00000471825	ZNF705F	A8MVS1	300 aa	Predicted RBP	13.94	□□□□□ -0.18
PITPNB-208	ENST00000471825	ZNF705D	P0CH99	300 aa	Predicted RBP	13.94	□□□□□ -0.18
PITPNB-208	ENST00000471825	ZNF705B	P0CI00	300 aa	Predicted RBP	13.94	□□□□□ -0.18
PITPNB-208	ENST00000471825	OR10J1	P30954	320 aa		13.94	□□□□□ -0.18
PITPNB-208	ENST00000471825	YIPF6	Q96EC8	236 aa		13.94	□□□□□ -0.18
PITPNB-208	ENST00000471825	ZNF486	Q96H40	463 aa	Predicted RBP	13.94	□□□□□ -0.18
PITPNB-208	ENST00000471825	NEU1	Q99519	415 aa		13.94	□□□□□ -0.18
PITPNB-208	ENST00000471825	NRN1	Q9NPD7	142 aa		13.94	□□□□□ -0.18
PITPNB-208	ENST00000471825	LRP1B	Q9NZR2	4599 aa		13.93	□□□□□ -0.18
PITPNB-208	ENST00000471825	RPS10-NUDT3	A0A1W2PQS6	291 aa		13.93	□□□□□ -0.18
PITPNB-208	ENST00000471825	ATG12	O94817	140 aa		13.93	□□□□□ -0.18
PITPNB-208	ENST00000471825	NXPH3	O95157	252 aa		13.93	□□□□□ -0.18
PITPNB-208	ENST00000471825	APOA1	P02647	267 aa		13.93	□□□□□ -0.18
PITPNB-208	ENST00000471825	IL4	P05112	153 aa		13.93	□□□□□ -0.18
PITPNB-208	ENST00000471825	HLA-DRB4	P13762	266 aa		13.93	□□□□□ -0.18
PITPNB-208	ENST00000471825	YPEL3	P61236	119 aa	Predicted RBP	13.93	□□□□□ -0.18
PITPNB-208	ENST00000471825	RNASE11	Q8TAA1	199 aa	Known RBP	13.93	□□□□□ -0.18
PITPNB-208	ENST00000471825	RRNAD1	Q96FB5	475 aa	Known RBP	13.93	□□□□□ -0.18
PITPNB-208	ENST00000471825	HLA-DRB4	X5D2U9	266 aa		13.93	□□□□□ -0.18
PITPNB-208	ENST00000471825	BUB3	O43684	328 aa		13.92	□□□□□ -0.18
PITPNB-208	ENST00000471825	HTN3	P15516	51 aa		13.92	□□□□□ -0.18
PITPNB-208	ENST00000471825	ELK1	P19419	428 aa		13.92	□□□□□ -0.18
PITPNB-208	ENST00000471825	HTR2B	P41595	481 aa		13.92	□□□□□ -0.18
PITPNB-208	ENST00000471825	SPCS3	P61009	180 aa		13.92	□□□□□ -0.18
PITPNB-208	ENST00000471825	FAM222A	Q5U5X8	452 aa		13.92	□□□□□ -0.18
PITPNB-208	ENST00000471825	GSG1L	Q6UXU4	331 aa		13.92	□□□□□ -0.18
PITPNB-208	ENST00000471825	SIGLEC15	Q6ZMC9	328 aa		13.92	□□□□□ -0.18
PITPNB-208	ENST00000471825	TMEM170A	Q8WVE7	144 aa		13.92	□□□□□ -0.18
PITPNB-208	ENST00000471825	SEPSECS	Q9HD40	501 aa	Known RBP	13.92	□□□□□ -0.18
PITPNB-208	ENST00000471825	DKK2	Q9UBU2	259 aa		13.92	□□□□□ -0.18
PITPNB-208	ENST00000471825	KLK11	Q9UBX7	282 aa		13.92	□□□□□ -0.18
PITPNB-208	ENST00000471825	HPGDS	O60760	199 aa		13.91	□□□□□ -0.18
PITPNB-208	ENST00000471825	ATP6V1G2	O95670	118 aa		13.91	□□□□□ -0.18
PITPNB-208	ENST00000471825	CD3D	P04234	171 aa		13.91	□□□□□ -0.18
PITPNB-208	ENST00000471825	UCP1	P25874	307 aa		13.91	□□□□□ -0.18
PITPNB-208	ENST00000471825	RNASE10	Q5GAN6	216 aa	Known RBP	13.91	□□□□□ -0.18
PITPNB-208	ENST00000471825	NPIPB3	Q92617	1050 aa		13.91	□□□□□ -0.18
PITPNB-208	ENST00000471825	FAM210B	Q96KR6	192 aa		13.91	□□□□□ -0.18
PITPNB-208	ENST00000471825	NIPSNAP3B	Q9BS92	247 aa		13.91	□□□□□ -0.18
PITPNB-208	ENST00000471825	HEYL	Q9NQ87	328 aa	Predicted RBP	13.91	□□□□□ -0.18
PITPNB-208	ENST00000471825	COPZ2	Q9P299	210 aa		13.91	□□□□□ -0.18
PITPNB-208	ENST00000471825	NACA	E9PAV3	2078 aa		13.91	□□□□□ -0.18
PITPNB-208	ENST00000471825	TMEM189	A5PLL7	270 aa		13.9	□□□□□ -0.18
PITPNB-208	ENST00000471825	SMIM9	A6NGZ8	99 aa		13.9	□□□□□ -0.18
PITPNB-208	ENST00000471825	SLC25A4	P12235	298 aa		13.9	□□□□□ -0.18
PITPNB-208	ENST00000471825	NKX2-1	P43699	371 aa	Predicted RBP	13.9	□□□□□ -0.18
PITPNB-208	ENST00000471825	AARD	Q4LEZ3	155 aa		13.9	□□□□□ -0.18
PITPNB-208	ENST00000471825	C2orf83	Q53S99	150 aa		13.9	□□□□□ -0.18
PITPNB-208	ENST00000471825	C1orf134	Q5TEV5	83 aa		13.9	□□□□□ -0.18
PITPNB-208	ENST00000471825	OR4D10	Q8NGI6	311 aa		13.9	□□□□□ -0.18
PITPNB-208	ENST00000471825	OR13C8	Q8NGS7	320 aa		13.9	□□□□□ -0.18
PITPNB-208	ENST00000471825	RFNG	Q9Y644	331 aa		13.9	□□□□□ -0.18
PITPNB-208	ENST00000471825	RD3L	P0DJH9	198 aa		13.89	□□□□□ -0.19
PITPNB-208	ENST00000471825	SOHLH1	Q5JUK2	328 aa		13.89	□□□□□ -0.19
PITPNB-208	ENST00000471825	ZNF709	Q8N972	641 aa		13.89	□□□□□ -0.19
PITPNB-208	ENST00000471825	SLC24A4	Q8NFF2	622 aa		13.89	□□□□□ -0.19
PITPNB-208	ENST00000471825	OR51G1	Q8NGK1	321 aa		13.89	□□□□□ -0.19
PITPNB-208	ENST00000471825	OR52E5	Q8NH55	327 aa		13.89	□□□□□ -0.19
PITPNB-208	ENST00000471825	OR52I2	Q8NH67	350 aa		13.89	□□□□□ -0.19
PITPNB-208	ENST00000471825	LHFPL5	Q8TAF8	219 aa		13.89	□□□□□ -0.19
PITPNB-208	ENST00000471825	RNASEH2C	Q8TDP1	164 aa	Known RBP	13.89	□□□□□ -0.19
PITPNB-208	ENST00000471825	ACY3	Q96HD9	319 aa		13.89	□□□□□ -0.19
PITPNB-208	ENST00000471825	LINC00052	Q96N35	136 aa		13.89	□□□□□ -0.19
PITPNB-208	ENST00000471825	WDR12	Q9GZL7	423 aa	Known RBP	13.89	□□□□□ -0.19
PITPNB-208	ENST00000471825	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	13.89	□□□□□ -0.19
PITPNB-208	ENST00000471825	TOMM40	O96008	361 aa		13.88	□□□□□ -0.19
PITPNB-208	ENST00000471825	PSG1	P11464	419 aa		13.88	□□□□□ -0.19
PITPNB-208	ENST00000471825	NCS1	P62166	190 aa		13.88	□□□□□ -0.19
PITPNB-208	ENST00000471825	RNF212	Q495C1	297 aa		13.88	□□□□□ -0.19
PITPNB-208	ENST00000471825	ARRDC1	Q8N5I2	433 aa		13.88	□□□□□ -0.19
PITPNB-208	ENST00000471825	CCDC71L	Q8N9Z2	235 aa		13.88	□□□□□ -0.19
PITPNB-208	ENST00000471825	GPR146	Q96CH1	333 aa		13.88	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms