RNA–Protein interactions for RNA: ENST00000471704.1

COMMD1-207, Transcript of copper metabolism domain containing 1, humanhuman

TSL 1 (best)

Gene COMMD1, Length 604 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-207ENST00000471704 RND2P52198 227 aa13.87□□□□□ -0.19
COMMD1-207ENST00000471704 EWSR1Q01844 656 aaKnown RBP eCLIP13.87□□□□□ -0.19
COMMD1-207ENST00000471704 SMCO1Q147U7 214 aa13.87□□□□□ -0.19
COMMD1-207ENST00000471704 DEFB135Q30KP9 77 aa13.87□□□□□ -0.19
COMMD1-207ENST00000471704 TMED4Q7Z7H5 227 aa13.87□□□□□ -0.19
COMMD1-207ENST00000471704 RNASEH2CQ8TDP1 164 aaKnown RBP13.87□□□□□ -0.19
COMMD1-207ENST00000471704 SRRQ9GZT4 340 aa13.87□□□□□ -0.19
COMMD1-207ENST00000471704 MS4A6AQ9H2W1 248 aa13.87□□□□□ -0.19
COMMD1-207ENST00000471704 RBKSQ9H477 322 aa13.87□□□□□ -0.19
COMMD1-207ENST00000471704 A0A0J9YWU9 116 aa13.86□□□□□ -0.19
COMMD1-207ENST00000471704 NPY1RP25929 384 aa13.86□□□□□ -0.19
COMMD1-207ENST00000471704 BMI1P35226 326 aa13.86□□□□□ -0.19
COMMD1-207ENST00000471704 LGI3Q8N145 548 aa13.86□□□□□ -0.19
COMMD1-207ENST00000471704 RNF183Q96D59 192 aa13.86□□□□□ -0.19
COMMD1-207ENST00000471704 RPS10-NUDT3A0A1W2PQS6 291 aa13.85□□□□□ -0.19
COMMD1-207ENST00000471704 PITX3O75364 302 aa13.85□□□□□ -0.19
COMMD1-207ENST00000471704 ANXA3P12429 323 aa13.85□□□□□ -0.19
COMMD1-207ENST00000471704 ATF4P18848 351 aaPredicted RBP13.85□□□□□ -0.19
COMMD1-207ENST00000471704 AP3S2P59780 193 aa13.85□□□□□ -0.19
COMMD1-207ENST00000471704 TMEM128Q5BJH2 165 aa13.85□□□□□ -0.19
COMMD1-207ENST00000471704 LYG2Q86SG7 212 aa13.85□□□□□ -0.19
COMMD1-207ENST00000471704 DTD1Q8TEA8 209 aa13.85□□□□□ -0.19
COMMD1-207ENST00000471704 TRAV30A0A087WSZ9 112 aa13.84□□□□□ -0.19
COMMD1-207ENST00000471704 SLC25A4P12235 298 aa13.84□□□□□ -0.19
COMMD1-207ENST00000471704 NPPCP23582 126 aa13.84□□□□□ -0.19
COMMD1-207ENST00000471704 OR10J1P30954 320 aa13.84□□□□□ -0.19
COMMD1-207ENST00000471704 SRPXP78539 464 aa13.84□□□□□ -0.19
COMMD1-207ENST00000471704 RBMS2Q15434 407 aaKnown RBP13.84□□□□□ -0.19
COMMD1-207ENST00000471704 BAK1Q16611 211 aa13.84□□□□□ -0.19
COMMD1-207ENST00000471704 STPG3Q8N7X2 389 aa13.84□□□□□ -0.19
COMMD1-207ENST00000471704 LRTM2Q8N967 370 aa13.84□□□□□ -0.19
COMMD1-207ENST00000471704 OR1S2Q8NGQ3 325 aa13.84□□□□□ -0.19
COMMD1-207ENST00000471704 U3KQE9 123 aa13.84□□□□□ -0.19
COMMD1-207ENST00000471704 CD5P06127 495 aa13.83□□□□□ -0.2
COMMD1-207ENST00000471704 PPP1R1AQ13522 171 aa13.83□□□□□ -0.2
COMMD1-207ENST00000471704 USF2Q15853 346 aaPredicted RBP13.83□□□□□ -0.2
COMMD1-207ENST00000471704 DEDD2Q8WXF8 326 aa13.83□□□□□ -0.2
COMMD1-207ENST00000471704 LINC00476Q8WZB0 136 aa13.83□□□□□ -0.2
COMMD1-207ENST00000471704 NPIPB3Q92617 1050 aa13.83□□□□□ -0.2
COMMD1-207ENST00000471704 METTL26Q96S19 204 aa13.83□□□□□ -0.2
COMMD1-207ENST00000471704 SDHCQ99643 169 aaPredicted RBP13.83□□□□□ -0.2
COMMD1-207ENST00000471704 SLC25A21Q9BQT8 299 aaPredicted RBP13.83□□□□□ -0.2
COMMD1-207ENST00000471704 TRAV2A0A0B4J234 112 aa13.82□□□□□ -0.2
COMMD1-207ENST00000471704 DUXBA0A1W2PPF3 345 aa13.82□□□□□ -0.2
COMMD1-207ENST00000471704 IFNA10P01566 189 aa13.82□□□□□ -0.2
COMMD1-207ENST00000471704 P2RY1P47900 373 aa13.82□□□□□ -0.2
COMMD1-207ENST00000471704 YPEL3P61236 119 aaPredicted RBP13.82□□□□□ -0.2
COMMD1-207ENST00000471704 PAFAH1B2P68402 229 aa13.82□□□□□ -0.2
COMMD1-207ENST00000471704 LEMD1Q68G75 181 aa13.82□□□□□ -0.2
COMMD1-207ENST00000471704 OR1S1Q8NH92 325 aa13.82□□□□□ -0.2
COMMD1-207ENST00000471704 ACY3Q96HD9 319 aa13.82□□□□□ -0.2
COMMD1-207ENST00000471704 CACFD1Q9UGQ2 172 aa13.82□□□□□ -0.2
COMMD1-207ENST00000471704 U3KQ87 197 aa13.82□□□□□ -0.2
COMMD1-207ENST00000471704 CXorf65A6NEN9 183 aa13.81□□□□□ -0.2
COMMD1-207ENST00000471704 K7EQG2 157 aa13.81□□□□□ -0.2
COMMD1-207ENST00000471704 SFT2D2O95562 160 aa13.81□□□□□ -0.2
COMMD1-207ENST00000471704 VAMP1P23763 118 aa13.81□□□□□ -0.2
COMMD1-207ENST00000471704 CMC4P56277 68 aaPredicted RBP13.81□□□□□ -0.2
COMMD1-207ENST00000471704 DEFB131AP59861 70 aa13.81□□□□□ -0.2
COMMD1-207ENST00000471704 TMEM231Q9H6L2 316 aa13.81□□□□□ -0.2
COMMD1-207ENST00000471704 AGRNO00468 2067 aa13.8□□□□□ -0.2
COMMD1-207ENST00000471704 A0A1W2PS18 150 aa13.8□□□□□ -0.2
COMMD1-207ENST00000471704 NUPR2A6NF83 97 aa13.8□□□□□ -0.2
COMMD1-207ENST00000471704 DNASE2O00115 360 aaPredicted RBP13.8□□□□□ -0.2
COMMD1-207ENST00000471704 SCGB2A1O75556 95 aa13.8□□□□□ -0.2
COMMD1-207ENST00000471704 RPL11P62913 178 aaKnown RBP13.8□□□□□ -0.2
COMMD1-207ENST00000471704 PMS2P11Q13670 270 aa13.8□□□□□ -0.2
COMMD1-207ENST00000471704 SPANXN2Q5MJ10 180 aa13.8□□□□□ -0.2
COMMD1-207ENST00000471704 ETFRF1Q6IPR1 90 aa13.8□□□□□ -0.2
COMMD1-207ENST00000471704 CEMP1Q6PRD7 247 aaPredicted RBP13.8□□□□□ -0.2
COMMD1-207ENST00000471704 DCANP1Q8TF63 244 aa13.8□□□□□ -0.2
COMMD1-207ENST00000471704 Q8WTZ3 238 aa13.8□□□□□ -0.2
COMMD1-207ENST00000471704 GLMPQ8WWB7 406 aa13.8□□□□□ -0.2
COMMD1-207ENST00000471704 RABAC1Q9UI14 185 aa13.8□□□□□ -0.2
COMMD1-207ENST00000471704 IGKV1D-37A0A075B6S9 117 aa13.79□□□□□ -0.2
COMMD1-207ENST00000471704 TOMM40O96008 361 aa13.79□□□□□ -0.2
COMMD1-207ENST00000471704 IL4P05112 153 aa13.79□□□□□ -0.2
COMMD1-207ENST00000471704 IAPPP10997 89 aa13.79□□□□□ -0.2
COMMD1-207ENST00000471704 C16orf54Q6UWD8 224 aa13.79□□□□□ -0.2
COMMD1-207ENST00000471704 NOXA1Q86UR1 476 aa13.79□□□□□ -0.2
COMMD1-207ENST00000471704 CENPSQ8N2Z9 138 aa13.79□□□□□ -0.2
COMMD1-207ENST00000471704 STXBP6Q8NFX7 210 aa13.79□□□□□ -0.2
COMMD1-207ENST00000471704 CSTL1Q9H114 145 aa13.79□□□□□ -0.2
COMMD1-207ENST00000471704 HNRNPCP07910 306 aaKnown RBP eCLIP13.78□□□□□ -0.2
COMMD1-207ENST00000471704 PSG1P11464 419 aa13.78□□□□□ -0.2
COMMD1-207ENST00000471704 SLC25A6P12236 298 aa13.78□□□□□ -0.2
COMMD1-207ENST00000471704 BTCP35070 178 aa13.78□□□□□ -0.2
COMMD1-207ENST00000471704 GAMTQ14353 236 aa13.78□□□□□ -0.2
COMMD1-207ENST00000471704 FLVCR2Q9UPI3 526 aa13.78□□□□□ -0.2
COMMD1-207ENST00000471704 MPTX1A8MV57 137 aa13.77□□□□□ -0.21
COMMD1-207ENST00000471704 NDUFB6O95139 128 aa13.77□□□□□ -0.21
COMMD1-207ENST00000471704 HOXB5P09067 269 aa13.77□□□□□ -0.21
COMMD1-207ENST00000471704 TMEM217Q8N7C4 229 aa13.77□□□□□ -0.21
COMMD1-207ENST00000471704 TMED3Q9Y3Q3 217 aa13.77□□□□□ -0.21
COMMD1-207ENST00000471704 KMT2AQ03164 3969 aa13.76□□□□□ -0.21
COMMD1-207ENST00000471704 FAM90A26D6RGX4 464 aa13.76□□□□□ -0.21
COMMD1-207ENST00000471704 PRSS46E5RG02 174 aa13.76□□□□□ -0.21
COMMD1-207ENST00000471704 IFNA4P05014 189 aa13.76□□□□□ -0.21
COMMD1-207ENST00000471704 ZNF688P0C7X2 276 aa13.76□□□□□ -0.21
COMMD1-207ENST00000471704 RD3LP0DJH9 198 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms