RNA–Protein interactions for RNA: ENST00000471701.1

PRPF40A-207, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 293 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-207ENST00000471701 HAGHLQ6PII5 290 aaPredicted RBP-0.65□□□□□ -2.51
PRPF40A-207ENST00000471701 ATOH7Q8N100 152 aa-0.65□□□□□ -2.51
PRPF40A-207ENST00000471701 ST6GALNAC3Q8NDV1 305 aa-0.65□□□□□ -2.51
PRPF40A-207ENST00000471701 C6orf62Q9GZU0 229 aaPredicted RBP-0.65□□□□□ -2.51
PRPF40A-207ENST00000471701 OR51I1Q9H343 314 aa-0.65□□□□□ -2.51
PRPF40A-207ENST00000471701 IMP3Q9NV31 184 aaKnown RBP-0.65□□□□□ -2.51
PRPF40A-207ENST00000471701 UBAP1Q9NZ09 502 aa-0.65□□□□□ -2.51
PRPF40A-207ENST00000471701 LOC285556D6RIA3 1793 aa-0.65□□□□□ -2.51
PRPF40A-207ENST00000471701 TET1Q8NFU7 2136 aa-0.65□□□□□ -2.51
PRPF40A-207ENST00000471701 SIP14410 1827 aa-0.66□□□□□ -2.51
PRPF40A-207ENST00000471701 HIVEP3Q5T1R4 2406 aa-0.66□□□□□ -2.51
PRPF40A-207ENST00000471701 GOLGA8KD6RF30 607 aa-0.66□□□□□ -2.52
PRPF40A-207ENST00000471701 CXCR6O00574 342 aa-0.66□□□□□ -2.52
PRPF40A-207ENST00000471701 COX5BP10606 129 aa-0.66□□□□□ -2.52
PRPF40A-207ENST00000471701 MYL12AP19105 171 aa-0.66□□□□□ -2.52
PRPF40A-207ENST00000471701 RPS12P25398 132 aaKnown RBP-0.66□□□□□ -2.52
PRPF40A-207ENST00000471701 LINC01554Q52M75 96 aa-0.66□□□□□ -2.52
PRPF40A-207ENST00000471701 CLVS2Q5SYC1 327 aa-0.66□□□□□ -2.52
PRPF40A-207ENST00000471701 PLEKHG7Q6ZR37 379 aa-0.66□□□□□ -2.52
PRPF40A-207ENST00000471701 OR8D4Q8NGM9 314 aa-0.66□□□□□ -2.52
PRPF40A-207ENST00000471701 PSMF1Q92530 271 aa-0.66□□□□□ -2.52
PRPF40A-207ENST00000471701 TOMM6Q96B49 74 aa-0.66□□□□□ -2.52
PRPF40A-207ENST00000471701 LINC00052Q96N35 136 aa-0.66□□□□□ -2.52
PRPF40A-207ENST00000471701 UPF3BQ9BZI7 483 aaKnown RBP-0.66□□□□□ -2.52
PRPF40A-207ENST00000471701 OSTCQ9NRP0 149 aa-0.66□□□□□ -2.52
PRPF40A-207ENST00000471701 HECW2Q9P2P5 1572 aa-0.66□□□□□ -2.52
PRPF40A-207ENST00000471701 ABCC11Q96J66 1382 aa-0.67□□□□□ -2.52
PRPF40A-207ENST00000471701 OR2J2O76002 312 aa-0.67□□□□□ -2.52
PRPF40A-207ENST00000471701 C8orf88P0DMB2 117 aa-0.67□□□□□ -2.52
PRPF40A-207ENST00000471701 QRFPP83859 136 aa-0.67□□□□□ -2.52
PRPF40A-207ENST00000471701 PMAIP1Q13794 54 aa-0.67□□□□□ -2.52
PRPF40A-207ENST00000471701 TEX47Q8TBZ9 253 aa-0.67□□□□□ -2.52
PRPF40A-207ENST00000471701 ORMDL1Q9P0S3 153 aa-0.67□□□□□ -2.52
PRPF40A-207ENST00000471701 HEATR1Q9H583 2144 aaKnown RBP-0.67□□□□□ -2.52
PRPF40A-207ENST00000471701 DOCK5Q9H7D0 1870 aa-0.67□□□□□ -2.52
PRPF40A-207ENST00000471701 FANCMQ8IYD8 2048 aa-0.67□□□□□ -2.52
PRPF40A-207ENST00000471701 CECR2Q9BXF3 1484 aa-0.67□□□□□ -2.52
PRPF40A-207ENST00000471701 A0A1B0GV50 99 aa-0.68□□□□□ -2.52
PRPF40A-207ENST00000471701 ERICH2A1L162 156 aa-0.68□□□□□ -2.52
PRPF40A-207ENST00000471701 AHSA1O95433 338 aa-0.68□□□□□ -2.52
PRPF40A-207ENST00000471701 OCMP0CE72 109 aaPredicted RBP-0.68□□□□□ -2.52
PRPF40A-207ENST00000471701 DEFA1P59665 94 aa-0.68□□□□□ -2.52
PRPF40A-207ENST00000471701 C14orf132Q9NPU4 83 aa-0.68□□□□□ -2.52
PRPF40A-207ENST00000471701 NHP2Q9NX24 153 aaKnown RBP-0.68□□□□□ -2.52
PRPF40A-207ENST00000471701 MED29Q9NX70 200 aa-0.68□□□□□ -2.52
PRPF40A-207ENST00000471701 MYO18AQ92614 2054 aaKnown RBP-0.68□□□□□ -2.52
PRPF40A-207ENST00000471701 EVC2Q86UK5 1308 aa-0.68□□□□□ -2.52
PRPF40A-207ENST00000471701 UBR5O95071 2799 aaPredicted RBP-0.68□□□□□ -2.52
PRPF40A-207ENST00000471701 MED1Q15648 1581 aaPredicted RBP-0.69□□□□□ -2.52
PRPF40A-207ENST00000471701 IGLV3-32A0A0A0MS00 114 aa-0.69□□□□□ -2.52
PRPF40A-207ENST00000471701 EXOC1LA0A1B0GW35 172 aa-0.69□□□□□ -2.52
PRPF40A-207ENST00000471701 TCRBV4S1A1TA0A5B7 111 aa-0.69□□□□□ -2.52
PRPF40A-207ENST00000471701 EEF1E1-BLOC1S5C9J1V9 151 aa-0.69□□□□□ -2.52
PRPF40A-207ENST00000471701 IFNA10P01566 189 aa-0.69□□□□□ -2.52
PRPF40A-207ENST00000471701 HLA-DRB1P01911 266 aa-0.69□□□□□ -2.52
PRPF40A-207ENST00000471701 CD2P06729 351 aa-0.69□□□□□ -2.52
PRPF40A-207ENST00000471701 CDKL4Q5MAI5 379 aa-0.69□□□□□ -2.52
PRPF40A-207ENST00000471701 GLIPR1L1Q6UWM5 242 aa-0.69□□□□□ -2.52
PRPF40A-207ENST00000471701 LRRN1Q6UXK5 716 aa-0.69□□□□□ -2.52
PRPF40A-207ENST00000471701 TMEM254Q8TBM7 123 aa-0.69□□□□□ -2.52
PRPF40A-207ENST00000471701 NIPSNAP1Q9BPW8 284 aa-0.69□□□□□ -2.52
PRPF40A-207ENST00000471701 TNS3Q68CZ2 1445 aa-0.7□□□□□ -2.52
PRPF40A-207ENST00000471701 CHD3Q12873 2000 aaKnown RBP-0.7□□□□□ -2.52
PRPF40A-207ENST00000471701 UNC13CQ8NB66 2214 aa-0.7□□□□□ -2.52
PRPF40A-207ENST00000471701 TRBV30A0A0K0K1B3 111 aa-0.7□□□□□ -2.52
PRPF40A-207ENST00000471701 GADD45GO95257 159 aa-0.7□□□□□ -2.52
PRPF40A-207ENST00000471701 DHFRP00374 187 aa-0.7□□□□□ -2.52
PRPF40A-207ENST00000471701 OR4E1P0C645 316 aa-0.7□□□□□ -2.52
PRPF40A-207ENST00000471701 RPS20P60866 119 aaKnown RBP-0.7□□□□□ -2.52
PRPF40A-207ENST00000471701 RAB5BP61020 215 aa-0.7□□□□□ -2.52
PRPF40A-207ENST00000471701 LPCAT3Q6P1A2 487 aa-0.7□□□□□ -2.52
PRPF40A-207ENST00000471701 Q8IYB0 196 aa-0.7□□□□□ -2.52
PRPF40A-207ENST00000471701 OR10AC1Q8NH08 325 aa-0.7□□□□□ -2.52
PRPF40A-207ENST00000471701 ZC2HC1AQ96GY0 325 aa-0.7□□□□□ -2.52
PRPF40A-207ENST00000471701 BCL2L10Q9HD36 194 aa-0.7□□□□□ -2.52
PRPF40A-207ENST00000471701 FLNCQ14315 2725 aa-0.71□□□□□ -2.52
PRPF40A-207ENST00000471701 BCL9O00512 1426 aa-0.71□□□□□ -2.52
PRPF40A-207ENST00000471701 HMCN2Q8NDA2 5059 aa-0.71□□□□□ -2.52
PRPF40A-207ENST00000471701 HSBP1L1C9JCN9 74 aa-0.71□□□□□ -2.52
PRPF40A-207ENST00000471701 M0QZ92 97 aa-0.71□□□□□ -2.52
PRPF40A-207ENST00000471701 SNRPD2P62316 118 aaKnown RBP-0.71□□□□□ -2.52
PRPF40A-207ENST00000471701 TRAPPC6BQ86SZ2 158 aa-0.71□□□□□ -2.52
PRPF40A-207ENST00000471701 OR52L1Q8NGH7 329 aa-0.71□□□□□ -2.52
PRPF40A-207ENST00000471701 PIGXQ8TBF5 258 aa-0.71□□□□□ -2.52
PRPF40A-207ENST00000471701 WFDC5Q8TCV5 224 aa-0.71□□□□□ -2.52
PRPF40A-207ENST00000471701 RAB8BQ92930 207 aa-0.71□□□□□ -2.52
PRPF40A-207ENST00000471701 CHMP4BQ9H444 224 aaKnown RBP-0.71□□□□□ -2.52
PRPF40A-207ENST00000471701 PRTFDC1Q9NRG1 225 aa-0.71□□□□□ -2.52
PRPF40A-207ENST00000471701 UTP11Q9Y3A2 253 aaKnown RBP-0.71□□□□□ -2.52
PRPF40A-207ENST00000471701 PLXND1Q9Y4D7 1925 aa-0.72□□□□□ -2.52
PRPF40A-207ENST00000471701 NKX2-5P52952 324 aaPredicted RBP-0.72□□□□□ -2.52
PRPF40A-207ENST00000471701 TSNQ15631 228 aaKnown RBP-0.72□□□□□ -2.52
PRPF40A-207ENST00000471701 ZNF833PQ6ZTB9 187 aa-0.72□□□□□ -2.52
PRPF40A-207ENST00000471701 SLC35B4Q969S0 331 aa-0.72□□□□□ -2.52
PRPF40A-207ENST00000471701 WFDC10AQ9H1F0 79 aa-0.72□□□□□ -2.52
PRPF40A-207ENST00000471701 PKIGQ9Y2B9 76 aa-0.72□□□□□ -2.52
PRPF40A-207ENST00000471701 TMEM56-RWDD3S4R434 201 aa-0.72□□□□□ -2.52
PRPF40A-207ENST00000471701 DSTQ03001 7570 aaKnown RBP-0.72□□□□□ -2.52
PRPF40A-207ENST00000471701 MYH7BA7E2Y1 1941 aa-0.72□□□□□ -2.53
PRPF40A-207ENST00000471701 RIMBP3CA6NJZ7 1639 aa-0.73□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms