RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 ZNF714Q96N38 554 aa3.48□□□□□ -1.85
CCDC39-202ENST00000471307 YPEL2Q96QA6 119 aa3.48□□□□□ -1.85
CCDC39-202ENST00000471307 ATP5SQ99766 215 aa3.48□□□□□ -1.85
CCDC39-202ENST00000471307 GINS4Q9BRT9 223 aa3.48□□□□□ -1.85
CCDC39-202ENST00000471307 MARVELD1Q9BSK0 173 aa3.48□□□□□ -1.85
CCDC39-202ENST00000471307 ALX4Q9H161 411 aaPredicted RBP3.48□□□□□ -1.85
CCDC39-202ENST00000471307 OR2S2Q9NQN1 319 aa3.48□□□□□ -1.85
CCDC39-202ENST00000471307 C19orf12Q9NSK7 152 aa3.48□□□□□ -1.85
CCDC39-202ENST00000471307 CALYQ9NYX4 217 aa3.48□□□□□ -1.85
CCDC39-202ENST00000471307 IDI2-AS1Q9NZ38 188 aa3.48□□□□□ -1.85
CCDC39-202ENST00000471307 RPUSD1Q9UJJ7 312 aaKnown RBP3.48□□□□□ -1.85
CCDC39-202ENST00000471307 JPT1Q9UK76 154 aa3.48□□□□□ -1.85
CCDC39-202ENST00000471307 NUBP2Q9Y5Y2 271 aa3.48□□□□□ -1.85
CCDC39-202ENST00000471307 PDZD2O15018 2839 aa3.48□□□□□ -1.85
CCDC39-202ENST00000471307 ARHGAP32A7KAX9 2087 aa3.48□□□□□ -1.85
CCDC39-202ENST00000471307 CCDC168Q8NDH2 2452 aa3.47□□□□□ -1.85
CCDC39-202ENST00000471307 B4DSR2 109 aa3.47□□□□□ -1.85
CCDC39-202ENST00000471307 M0R1W7 72 aa3.47□□□□□ -1.85
CCDC39-202ENST00000471307 GOSR2O14653 212 aa3.47□□□□□ -1.85
CCDC39-202ENST00000471307 ENSAO43768 121 aaKnown RBP3.47□□□□□ -1.85
CCDC39-202ENST00000471307 DHFRP00374 187 aa3.47□□□□□ -1.85
CCDC39-202ENST00000471307 PPYP01298 95 aa3.47□□□□□ -1.85
CCDC39-202ENST00000471307 NFYAP23511 347 aaPredicted RBP3.47□□□□□ -1.85
CCDC39-202ENST00000471307 S100GP29377 79 aa3.47□□□□□ -1.85
CCDC39-202ENST00000471307 SSTR5P35346 364 aa3.47□□□□□ -1.85
CCDC39-202ENST00000471307 RAB7AP51149 207 aa3.47□□□□□ -1.85
CCDC39-202ENST00000471307 CCR6P51684 374 aa3.47□□□□□ -1.85
CCDC39-202ENST00000471307 DLX6P56179 175 aa3.47□□□□□ -1.85
CCDC39-202ENST00000471307 RPL32P62910 135 aaKnown RBP3.47□□□□□ -1.85
CCDC39-202ENST00000471307 LOXL1Q08397 574 aaPredicted RBP3.47□□□□□ -1.85
CCDC39-202ENST00000471307 HERPUD1Q15011 391 aa3.47□□□□□ -1.85
CCDC39-202ENST00000471307 MSMO1Q15800 293 aa3.47□□□□□ -1.85
CCDC39-202ENST00000471307 MORN2Q502X0 79 aa3.47□□□□□ -1.85
CCDC39-202ENST00000471307 AADACL3Q5VUY0 350 aa3.47□□□□□ -1.85
CCDC39-202ENST00000471307 TCF23Q7RTU1 214 aa3.47□□□□□ -1.85
CCDC39-202ENST00000471307 C8orf31Q8N9H6 132 aa3.47□□□□□ -1.85
CCDC39-202ENST00000471307 OR1L1Q8NH94 360 aa3.47□□□□□ -1.85
CCDC39-202ENST00000471307 ZNF596Q8TC21 504 aa3.47□□□□□ -1.85
CCDC39-202ENST00000471307 FAM104AQ969W3 186 aa3.47□□□□□ -1.85
CCDC39-202ENST00000471307 FOXC2Q99958 501 aa3.47□□□□□ -1.85
CCDC39-202ENST00000471307 ZNF2Q9BSG1 426 aaPredicted RBP3.47□□□□□ -1.85
CCDC39-202ENST00000471307 METTL8Q9H825 291 aaKnown RBP3.47□□□□□ -1.85
CCDC39-202ENST00000471307 KPTNQ9Y664 436 aa3.47□□□□□ -1.85
CCDC39-202ENST00000471307 FLNBO75369 2602 aaKnown RBP3.47□□□□□ -1.85
CCDC39-202ENST00000471307 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.47□□□□□ -1.85
CCDC39-202ENST00000471307 ITPR3Q14573 2671 aa3.46□□□□□ -1.86
CCDC39-202ENST00000471307 TRAV6A0A075B6T7 132 aa3.46□□□□□ -1.86
CCDC39-202ENST00000471307 A0A096LNT2 108 aa3.46□□□□□ -1.86
CCDC39-202ENST00000471307 OR5H14A6NHG9 310 aa3.46□□□□□ -1.86
CCDC39-202ENST00000471307 INMT-MINDY4F8WBC2 141 aa3.46□□□□□ -1.86
CCDC39-202ENST00000471307 IL5P05113 134 aa3.46□□□□□ -1.86
CCDC39-202ENST00000471307 CTSDP07339 412 aaPredicted RBP3.46□□□□□ -1.86
CCDC39-202ENST00000471307 OR8U9P0C7N5 309 aa3.46□□□□□ -1.86
CCDC39-202ENST00000471307 IGHV1-8P0DP01 117 aa3.46□□□□□ -1.86
CCDC39-202ENST00000471307 CCL3L1P16619 93 aa3.46□□□□□ -1.86
CCDC39-202ENST00000471307 OMGP23515 440 aa3.46□□□□□ -1.86
CCDC39-202ENST00000471307 PRTN3P24158 256 aa3.46□□□□□ -1.86
CCDC39-202ENST00000471307 NFYBP25208 207 aa3.46□□□□□ -1.86
CCDC39-202ENST00000471307 CD34P28906 385 aa3.46□□□□□ -1.86
CCDC39-202ENST00000471307 GNRHRP30968 328 aa3.46□□□□□ -1.86
CCDC39-202ENST00000471307 PPP1CCP36873 323 aaKnown RBP3.46□□□□□ -1.86
CCDC39-202ENST00000471307 TAS2R31P59538 309 aa3.46□□□□□ -1.86
CCDC39-202ENST00000471307 UBE2MP61081 183 aaKnown RBP3.46□□□□□ -1.86
CCDC39-202ENST00000471307 ARF6P62330 175 aa3.46□□□□□ -1.86
CCDC39-202ENST00000471307 LCN2P80188 198 aa3.46□□□□□ -1.86
CCDC39-202ENST00000471307 ABCA11PQ4W5N1 156 aa3.46□□□□□ -1.86
CCDC39-202ENST00000471307 TMEM128Q5BJH2 165 aa3.46□□□□□ -1.86
CCDC39-202ENST00000471307 SLC25A48Q6ZT89 311 aaKnown RBP3.46□□□□□ -1.86
CCDC39-202ENST00000471307 CMTM1Q8IZ96 169 aa3.46□□□□□ -1.86
CCDC39-202ENST00000471307 LINC00311Q8N616 119 aa3.46□□□□□ -1.86
CCDC39-202ENST00000471307 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.46□□□□□ -1.86
CCDC39-202ENST00000471307 OR13C8Q8NGS7 320 aa3.46□□□□□ -1.86
CCDC39-202ENST00000471307 OR13D1Q8NGV5 346 aa3.46□□□□□ -1.86
CCDC39-202ENST00000471307 OR8U1Q8NH10 309 aa3.46□□□□□ -1.86
CCDC39-202ENST00000471307 OR9G1Q8NH87 305 aa3.46□□□□□ -1.86
CCDC39-202ENST00000471307 UBALD1Q8TB05 177 aa3.46□□□□□ -1.86
CCDC39-202ENST00000471307 CD300LFQ8TDQ1 290 aa3.46□□□□□ -1.86
CCDC39-202ENST00000471307 TNFRSF14Q92956 283 aa3.46□□□□□ -1.86
CCDC39-202ENST00000471307 MRGPRFQ96AM1 343 aa3.46□□□□□ -1.86
CCDC39-202ENST00000471307 AGMATQ9BSE5 352 aa3.46□□□□□ -1.86
CCDC39-202ENST00000471307 REG4Q9BYZ8 158 aa3.46□□□□□ -1.86
CCDC39-202ENST00000471307 C20orf85Q9H1P6 137 aa3.46□□□□□ -1.86
CCDC39-202ENST00000471307 TMEM133Q9H2Q1 129 aa3.46□□□□□ -1.86
CCDC39-202ENST00000471307 TREM1Q9NP99 234 aa3.46□□□□□ -1.86
CCDC39-202ENST00000471307 OR1A1Q9P1Q5 309 aa3.46□□□□□ -1.86
CCDC39-202ENST00000471307 PSG11Q9UQ72 335 aa3.46□□□□□ -1.86
CCDC39-202ENST00000471307 C14orf166Q9Y224 244 aaKnown RBP3.46□□□□□ -1.86
CCDC39-202ENST00000471307 RBM7Q9Y580 266 aaKnown RBP3.46□□□□□ -1.86
CCDC39-202ENST00000471307 TEX15Q9BXT5 2789 aa3.46□□□□□ -1.86
CCDC39-202ENST00000471307 CREBBPQ92793 2442 aa3.46□□□□□ -1.86
CCDC39-202ENST00000471307 ABCA1O95477 2261 aa3.45□□□□□ -1.86
CCDC39-202ENST00000471307 TRBV9A0A0B4J1U6 114 aa3.45□□□□□ -1.86
CCDC39-202ENST00000471307 IGHV3-43A0A0B4J1X8 118 aa3.45□□□□□ -1.86
CCDC39-202ENST00000471307 IGKV1D-13A0A0B4J2D9 117 aa3.45□□□□□ -1.86
CCDC39-202ENST00000471307 PIGBOS1A0A0B4J2F0 54 aa3.45□□□□□ -1.86
CCDC39-202ENST00000471307 RAB19A4D1S5 217 aa3.45□□□□□ -1.86
CCDC39-202ENST00000471307 SNRPGP15A8MWD9 76 aa3.45□□□□□ -1.86
CCDC39-202ENST00000471307 GPR31O00270 319 aa3.45□□□□□ -1.86
CCDC39-202ENST00000471307 TOR1AO14656 332 aa3.45□□□□□ -1.86
CCDC39-202ENST00000471307 HSD17B6O14756 317 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms