RNA–Protein interactions for RNA: ENST00000471167.1

PRPF40A-206, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-206ENST00000471167 TRAV13-1A0A0B4J241 112 aa3.02□□□□□ -1.93
PRPF40A-206ENST00000471167 IGHV5-51A0A0C4DH38 117 aa3.02□□□□□ -1.93
PRPF40A-206ENST00000471167 IGHV7-4-1A0A0J9YVY3 117 aa3.02□□□□□ -1.93
PRPF40A-206ENST00000471167 A0A1B0GW54 56 aa3.02□□□□□ -1.93
PRPF40A-206ENST00000471167 A8MWP6 167 aa3.02□□□□□ -1.93
PRPF40A-206ENST00000471167 BUB1B-PAK6H3BSN5 160 aa3.02□□□□□ -1.93
PRPF40A-206ENST00000471167 TMEM256-PLSCR3K7ERE1 68 aa3.02□□□□□ -1.93
PRPF40A-206ENST00000471167 ZNF324O75467 553 aaPredicted RBP3.02□□□□□ -1.93
PRPF40A-206ENST00000471167 IGKV3-11P04433 115 aa3.02□□□□□ -1.93
PRPF40A-206ENST00000471167 RPL22P35268 128 aaKnown RBP3.02□□□□□ -1.93
PRPF40A-206ENST00000471167 CSN1S1P47710 185 aa3.02□□□□□ -1.93
PRPF40A-206ENST00000471167 MEF2BQ02080 365 aaPredicted RBP3.02□□□□□ -1.93
PRPF40A-206ENST00000471167 LUZP6Q538Z0 58 aa3.02□□□□□ -1.93
PRPF40A-206ENST00000471167 RNASE13Q5GAN3 156 aaKnown RBP3.02□□□□□ -1.93
PRPF40A-206ENST00000471167 MEIG1Q5JSS6 88 aa3.02□□□□□ -1.93
PRPF40A-206ENST00000471167 FAM78AQ5JUQ0 283 aa3.02□□□□□ -1.93
PRPF40A-206ENST00000471167 C9orf62Q8N4C0 152 aa3.02□□□□□ -1.93
PRPF40A-206ENST00000471167 OR10G2Q8NGC3 310 aa3.02□□□□□ -1.93
PRPF40A-206ENST00000471167 OR5D14Q8NGL3 314 aa3.02□□□□□ -1.93
PRPF40A-206ENST00000471167 SHANK2-AS3Q9BTD1 123 aa3.02□□□□□ -1.93
PRPF40A-206ENST00000471167 DERL1Q9BUN8 251 aa3.02□□□□□ -1.93
PRPF40A-206ENST00000471167 TMEM191AQ9H0A3 160 aa3.02□□□□□ -1.93
PRPF40A-206ENST00000471167 IL36BQ9NZH7 164 aa3.02□□□□□ -1.93
PRPF40A-206ENST00000471167 SYNJ1O43426 1573 aa3.02□□□□□ -1.93
PRPF40A-206ENST00000471167 CEP170Q5SW79 1584 aa3.02□□□□□ -1.93
PRPF40A-206ENST00000471167 CDK5RAP2Q96SN8 1893 aa3.02□□□□□ -1.93
PRPF40A-206ENST00000471167 TRAPPC8Q9Y2L5 1435 aa3.02□□□□□ -1.93
PRPF40A-206ENST00000471167 DSPPQ9NZW4 1301 aa3.01□□□□□ -1.93
PRPF40A-206ENST00000471167 IGHV3-49A0A0A0MS15 119 aa3.01□□□□□ -1.93
PRPF40A-206ENST00000471167 IGHV5-10-1A0A0J9YXX1 117 aa3.01□□□□□ -1.93
PRPF40A-206ENST00000471167 FAM236AA0A1B0GUQ0 79 aa3.01□□□□□ -1.93
PRPF40A-206ENST00000471167 FAM236BA0A1B0GV22 79 aa3.01□□□□□ -1.93
PRPF40A-206ENST00000471167 LEUTXA8MZ59 168 aa3.01□□□□□ -1.93
PRPF40A-206ENST00000471167 H3BMG7 143 aa3.01□□□□□ -1.93
PRPF40A-206ENST00000471167 IGLV3-25P01717 112 aa3.01□□□□□ -1.93
PRPF40A-206ENST00000471167 CXCL1P09341 107 aa3.01□□□□□ -1.93
PRPF40A-206ENST00000471167 PSMB8P28062 276 aa3.01□□□□□ -1.93
PRPF40A-206ENST00000471167 SRP14P37108 136 aaKnown RBP3.01□□□□□ -1.93
PRPF40A-206ENST00000471167 CRISP3P54108 245 aa3.01□□□□□ -1.93
PRPF40A-206ENST00000471167 FOXA3P55318 350 aaPredicted RBP3.01□□□□□ -1.93
PRPF40A-206ENST00000471167 EIF5AP63241 154 aaKnown RBP3.01□□□□□ -1.93
PRPF40A-206ENST00000471167 RHOGP84095 191 aa3.01□□□□□ -1.93
PRPF40A-206ENST00000471167 HSD52Q0P140 79 aa3.01□□□□□ -1.93
PRPF40A-206ENST00000471167 LCN15Q6UWW0 184 aa3.01□□□□□ -1.93
PRPF40A-206ENST00000471167 C10orf126Q8N4M7 172 aa3.01□□□□□ -1.93
PRPF40A-206ENST00000471167 SDF2Q99470 211 aa3.01□□□□□ -1.93
PRPF40A-206ENST00000471167 B9D2Q9BPU9 175 aa3.01□□□□□ -1.93
PRPF40A-206ENST00000471167 ADAT1Q9BUB4 502 aaKnown RBP3.01□□□□□ -1.93
PRPF40A-206ENST00000471167 PLA2G12AQ9BZM1 189 aa3.01□□□□□ -1.93
PRPF40A-206ENST00000471167 TMEM133Q9H2Q1 129 aa3.01□□□□□ -1.93
PRPF40A-206ENST00000471167 Q9H521 79 aa3.01□□□□□ -1.93
PRPF40A-206ENST00000471167 RERGLQ9H628 205 aa3.01□□□□□ -1.93
PRPF40A-206ENST00000471167 SLC39A9Q9NUM3 307 aa3.01□□□□□ -1.93
PRPF40A-206ENST00000471167 CCDC167Q9P0B6 97 aa3.01□□□□□ -1.93
PRPF40A-206ENST00000471167 SCP2D1Q9UJQ7 156 aa3.01□□□□□ -1.93
PRPF40A-206ENST00000471167 TNKS1BP1Q9C0C2 1729 aaKnown RBP3□□□□□ -1.93
PRPF40A-206ENST00000471167 IGLV11-55A0A075B6I3 123 aa3□□□□□ -1.93
PRPF40A-206ENST00000471167 IGHV3-43A0A0B4J1X8 118 aa3□□□□□ -1.93
PRPF40A-206ENST00000471167 A0A0D9SEW6 157 aa3□□□□□ -1.93
PRPF40A-206ENST00000471167 INSP01308 110 aa3□□□□□ -1.93
PRPF40A-206ENST00000471167 APCSP02743 223 aa3□□□□□ -1.93
PRPF40A-206ENST00000471167 IGHV1-8P0DP01 117 aa3□□□□□ -1.93
PRPF40A-206ENST00000471167 CRYGSP22914 178 aa3□□□□□ -1.93
PRPF40A-206ENST00000471167 CRHBPP24387 322 aa3□□□□□ -1.93
PRPF40A-206ENST00000471167 KRTAP10-10P60014 251 aa3□□□□□ -1.93
PRPF40A-206ENST00000471167 S100A10P60903 97 aa3□□□□□ -1.93
PRPF40A-206ENST00000471167 UBE2BP63146 152 aa3□□□□□ -1.93
PRPF40A-206ENST00000471167 PLGLB1Q02325 96 aa3□□□□□ -1.93
PRPF40A-206ENST00000471167 DIAPH2-AS1Q14236 149 aa3□□□□□ -1.93
PRPF40A-206ENST00000471167 LINC01554Q52M75 96 aa3□□□□□ -1.93
PRPF40A-206ENST00000471167 AMTNQ6UX39 209 aa3□□□□□ -1.93
PRPF40A-206ENST00000471167 GKN2Q86XP6 184 aa3□□□□□ -1.93
PRPF40A-206ENST00000471167 Q8N9L7 120 aa3□□□□□ -1.93
PRPF40A-206ENST00000471167 SUMF2Q8NBJ7 301 aa3□□□□□ -1.93
PRPF40A-206ENST00000471167 OR8D4Q8NGM9 314 aa3□□□□□ -1.93
PRPF40A-206ENST00000471167 ITLN2Q8WWU7 325 aaPredicted RBP3□□□□□ -1.93
PRPF40A-206ENST00000471167 TMEM158Q8WZ71 300 aa3□□□□□ -1.93
PRPF40A-206ENST00000471167 SLC25A46Q96AG3 418 aa3□□□□□ -1.93
PRPF40A-206ENST00000471167 CHCHD7Q9BUK0 85 aa3□□□□□ -1.93
PRPF40A-206ENST00000471167 PZPP20742 1482 aa3□□□□□ -1.93
PRPF40A-206ENST00000471167 MYOM3Q5VTT5 1437 aa3□□□□□ -1.93
PRPF40A-206ENST00000471167 TNS2Q63HR2 1409 aa3□□□□□ -1.93
PRPF40A-206ENST00000471167 LOXHD1Q8IVV2 1947 aa2.99□□□□□ -1.93
PRPF40A-206ENST00000471167 DICER1Q9UPY3 1922 aaKnown RBP2.99□□□□□ -1.93
PRPF40A-206ENST00000471167 PCM1Q15154 2024 aa2.99□□□□□ -1.93
PRPF40A-206ENST00000471167 TRAV27A0A087WT01 109 aa2.99□□□□□ -1.93
PRPF40A-206ENST00000471167 A0A087X0T9 212 aa2.99□□□□□ -1.93
PRPF40A-206ENST00000471167 A0A1B0GVX0 72 aa2.99□□□□□ -1.93
PRPF40A-206ENST00000471167 C7orf71A4D174 169 aa2.99□□□□□ -1.93
PRPF40A-206ENST00000471167 OR2T8A6NH00 312 aa2.99□□□□□ -1.93
PRPF40A-206ENST00000471167 A8MWV9 139 aa2.99□□□□□ -1.93
PRPF40A-206ENST00000471167 CCDC179H3BU77 68 aa2.99□□□□□ -1.93
PRPF40A-206ENST00000471167 BPY2O14599 106 aa2.99□□□□□ -1.93
PRPF40A-206ENST00000471167 NDUFB3O43676 98 aa2.99□□□□□ -1.93
PRPF40A-206ENST00000471167 KRASP01116 189 aa2.99□□□□□ -1.93
PRPF40A-206ENST00000471167 HIST1H1DP16402 221 aaKnown RBP2.99□□□□□ -1.93
PRPF40A-206ENST00000471167 CRYBB3P26998 211 aa2.99□□□□□ -1.93
PRPF40A-206ENST00000471167 ZNF93P35789 620 aaPredicted RBP2.99□□□□□ -1.93
PRPF40A-206ENST00000471167 TGFBR1P36897 503 aa2.99□□□□□ -1.93
PRPF40A-206ENST00000471167 DYNLT3P51808 116 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms