RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 DAPK2Q9UIK4 370 aa8.28□□□□□ -1.08
LSM2-209ENST00000470083 TRAV1-2A0A0B4J238 106 aa8.27□□□□□ -1.09
LSM2-209ENST00000470083 CORTO00230 105 aa8.27□□□□□ -1.09
LSM2-209ENST00000470083 CASQ2O14958 399 aaPredicted RBP8.27□□□□□ -1.09
LSM2-209ENST00000470083 SCGNO76038 276 aa8.27□□□□□ -1.09
LSM2-209ENST00000470083 GNAO1P09471 354 aa8.27□□□□□ -1.09
LSM2-209ENST00000470083 SNCAP37840 140 aa8.27□□□□□ -1.09
LSM2-209ENST00000470083 HSPE1P61604 102 aaKnown RBP8.27□□□□□ -1.09
LSM2-209ENST00000470083 HAMPP81172 84 aa8.27□□□□□ -1.09
LSM2-209ENST00000470083 RNASE12Q5GAN4 147 aaKnown RBP8.27□□□□□ -1.09
LSM2-209ENST00000470083 TMEM69Q5SWH9 247 aa8.27□□□□□ -1.09
LSM2-209ENST00000470083 SPATA31B1PQ5VZV4 182 aa8.27□□□□□ -1.09
LSM2-209ENST00000470083 SIGLEC15Q6ZMC9 328 aa8.27□□□□□ -1.09
LSM2-209ENST00000470083 DHRSXQ8N5I4 330 aa8.27□□□□□ -1.09
LSM2-209ENST00000470083 OR4C16Q8NGL9 310 aa8.27□□□□□ -1.09
LSM2-209ENST00000470083 OR4A16Q8NH70 328 aa8.27□□□□□ -1.09
LSM2-209ENST00000470083 TMEM208Q9BTX3 173 aa8.27□□□□□ -1.09
LSM2-209ENST00000470083 ACOT13Q9NPJ3 140 aa8.27□□□□□ -1.09
LSM2-209ENST00000470083 CBY3A6NI87 242 aa8.26□□□□□ -1.09
LSM2-209ENST00000470083 HSMCR30P0CW71 290 aa8.26□□□□□ -1.09
LSM2-209ENST00000470083 HERV-K104P61576 105 aa8.26□□□□□ -1.09
LSM2-209ENST00000470083 TIGITQ495A1 244 aa8.26□□□□□ -1.09
LSM2-209ENST00000470083 HOGA1Q86XE5 327 aa8.26□□□□□ -1.09
LSM2-209ENST00000470083 C10orf67Q8IYJ2 551 aa8.26□□□□□ -1.09
LSM2-209ENST00000470083 UHRF2Q96PU4 802 aa8.26□□□□□ -1.09
LSM2-209ENST00000470083 FNDC4Q9H6D8 234 aaPredicted RBP8.26□□□□□ -1.09
LSM2-209ENST00000470083 S100A14Q9HCY8 104 aa8.26□□□□□ -1.09
LSM2-209ENST00000470083 MRPS16Q9Y3D3 137 aaKnown RBP8.26□□□□□ -1.09
LSM2-209ENST00000470083 TRAV30A0A087WSZ9 112 aa8.25□□□□□ -1.09
LSM2-209ENST00000470083 INS-IGF2F8WCM5 200 aa8.25□□□□□ -1.09
LSM2-209ENST00000470083 M0QYG6 137 aa8.25□□□□□ -1.09
LSM2-209ENST00000470083 BUB3O43684 328 aa8.25□□□□□ -1.09
LSM2-209ENST00000470083 TSPOP30536 169 aa8.25□□□□□ -1.09
LSM2-209ENST00000470083 OPRK1P41145 380 aa8.25□□□□□ -1.09
LSM2-209ENST00000470083 RORCP51449 518 aa8.25□□□□□ -1.09
LSM2-209ENST00000470083 PAX9P55771 341 aa8.25□□□□□ -1.09
LSM2-209ENST00000470083 H2BFWTQ7Z2G1 175 aa8.25□□□□□ -1.09
LSM2-209ENST00000470083 SEC22AQ96IW7 307 aa8.25□□□□□ -1.09
LSM2-209ENST00000470083 IGF2BP2-AS1Q96M15 143 aa8.25□□□□□ -1.09
LSM2-209ENST00000470083 LINC00052Q96N35 136 aa8.25□□□□□ -1.09
LSM2-209ENST00000470083 PLAC8L1A1L4L8 177 aa8.24□□□□□ -1.09
LSM2-209ENST00000470083 ZNF705GA8MUZ8 300 aaPredicted RBP8.24□□□□□ -1.09
LSM2-209ENST00000470083 PTGES3LE9PB15 166 aa8.24□□□□□ -1.09
LSM2-209ENST00000470083 GSTZ1O43708 216 aaPredicted RBP8.24□□□□□ -1.09
LSM2-209ENST00000470083 PRM2P04554 102 aa8.24□□□□□ -1.09
LSM2-209ENST00000470083 RAB3BP20337 219 aa8.24□□□□□ -1.09
LSM2-209ENST00000470083 GCSHP23434 173 aa8.24□□□□□ -1.09
LSM2-209ENST00000470083 RPL5P46777 297 aaKnown RBP8.24□□□□□ -1.09
LSM2-209ENST00000470083 PSMB3P49720 205 aa8.24□□□□□ -1.09
LSM2-209ENST00000470083 MLLT11Q13015 90 aaPredicted RBP8.24□□□□□ -1.09
LSM2-209ENST00000470083 ESRGQ1W209 222 aa8.24□□□□□ -1.09
LSM2-209ENST00000470083 SPINK9Q5DT21 86 aa8.24□□□□□ -1.09
LSM2-209ENST00000470083 FAM78BQ5VT40 261 aa8.24□□□□□ -1.09
LSM2-209ENST00000470083 CMTM1Q8IZ96 169 aa8.24□□□□□ -1.09
LSM2-209ENST00000470083 Q8WTZ3 238 aa8.24□□□□□ -1.09
LSM2-209ENST00000470083 GNPNAT1Q96EK6 184 aaPredicted RBP8.24□□□□□ -1.09
LSM2-209ENST00000470083 FAM212BQ9NTI7 297 aaPredicted RBP8.24□□□□□ -1.09
LSM2-209ENST00000470083 FAT3Q8TDW7 4589 aa8.24□□□□□ -1.09
LSM2-209ENST00000470083 A0A087WTM6 91 aa8.23□□□□□ -1.09
LSM2-209ENST00000470083 IGLC1P0CG04 106 aa8.23□□□□□ -1.09
LSM2-209ENST00000470083 DNAH10OSP0CZ25 163 aa8.23□□□□□ -1.09
LSM2-209ENST00000470083 RNASE2P10153 161 aaKnown RBP8.23□□□□□ -1.09
LSM2-209ENST00000470083 MYL9P24844 172 aa8.23□□□□□ -1.09
LSM2-209ENST00000470083 ID1P41134 155 aa8.23□□□□□ -1.09
LSM2-209ENST00000470083 SUB1P53999 127 aaKnown RBP eCLIP8.23□□□□□ -1.095e-9■■■■■ 41.1
LSM2-209ENST00000470083 DHODHQ02127 395 aa8.23□□□□□ -1.09
LSM2-209ENST00000470083 FCN2Q15485 313 aa8.23□□□□□ -1.09
LSM2-209ENST00000470083 MLANAQ16655 118 aa8.23□□□□□ -1.09
LSM2-209ENST00000470083 EBLN2Q6P2I7 272 aa8.23□□□□□ -1.09
LSM2-209ENST00000470083 OR5AP2Q8NGF4 316 aa8.23□□□□□ -1.09
LSM2-209ENST00000470083 OR1S2Q8NGQ3 325 aa8.23□□□□□ -1.09
LSM2-209ENST00000470083 COQ8AQ8NI60 647 aa8.23□□□□□ -1.09
LSM2-209ENST00000470083 RXFP4Q8TDU9 374 aa8.23□□□□□ -1.09
LSM2-209ENST00000470083 DEFB104AQ8WTQ1 72 aa8.23□□□□□ -1.09
LSM2-209ENST00000470083 ABHD1Q96SE0 405 aa8.23□□□□□ -1.09
LSM2-209ENST00000470083 TMEM70Q9BUB7 260 aa8.23□□□□□ -1.09
LSM2-209ENST00000470083 WDR12Q9GZL7 423 aaKnown RBP8.23□□□□□ -1.09
LSM2-209ENST00000470083 TRAV26-1A0A087WT03 109 aa8.22□□□□□ -1.09
LSM2-209ENST00000470083 A0A0J9YX75 114 aa8.22□□□□□ -1.09
LSM2-209ENST00000470083 A8MTW9 85 aa8.22□□□□□ -1.09
LSM2-209ENST00000470083 F6UB75 175 aa8.22□□□□□ -1.09
LSM2-209ENST00000470083 EBAG9O00559 213 aa8.22□□□□□ -1.09
LSM2-209ENST00000470083 PLA2G1BP04054 148 aaKnown RBP8.22□□□□□ -1.09
LSM2-209ENST00000470083 IL4P05112 153 aa8.22□□□□□ -1.09
LSM2-209ENST00000470083 M6PRP20645 277 aa8.22□□□□□ -1.09
LSM2-209ENST00000470083 YPEL3P61236 119 aaPredicted RBP8.22□□□□□ -1.09
LSM2-209ENST00000470083 B2MP61769 119 aa8.22□□□□□ -1.09
LSM2-209ENST00000470083 SLC35G3Q8N808 338 aa8.22□□□□□ -1.09
LSM2-209ENST00000470083 OR6F1Q8NGZ6 308 aa8.22□□□□□ -1.09
LSM2-209ENST00000470083 FCGR1BQ92637 280 aa8.22□□□□□ -1.09
LSM2-209ENST00000470083 C8orf4Q9NR00 106 aa8.22□□□□□ -1.09
LSM2-209ENST00000470083 KLK11Q9UBX7 282 aa8.22□□□□□ -1.09
LSM2-209ENST00000470083 DNAH8Q96JB1 4490 aa8.21□□□□□ -1.09
LSM2-209ENST00000470083 GPR31O00270 319 aa8.21□□□□□ -1.1
LSM2-209ENST00000470083 SOCS3O14543 225 aa8.21□□□□□ -1.1
LSM2-209ENST00000470083 IGKV1-39P01597 117 aa8.21□□□□□ -1.1
LSM2-209ENST00000470083 IGKV1D-39P04432 117 aa8.21□□□□□ -1.1
LSM2-209ENST00000470083 FCER2P06734 321 aa8.21□□□□□ -1.1
LSM2-209ENST00000470083 OR10J1P30954 320 aa8.21□□□□□ -1.1
LSM2-209ENST00000470083 LCE2AQ5TA79 106 aaPredicted RBP8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms