RNA–Protein interactions for RNA: ENST00000469713.1

VPS8-220, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 668 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-220ENST00000469713 ZCCHC6Q5VYS8 1495 aaKnown RBP1.19□□□□□ -2.22
VPS8-220ENST00000469713 IGKV2-40A0A087WW87 121 aaPredicted RBP1.19□□□□□ -2.22
VPS8-220ENST00000469713 ZNF682O95780 498 aa1.19□□□□□ -2.22
VPS8-220ENST00000469713 IFNA1P01562 189 aa1.19□□□□□ -2.22
VPS8-220ENST00000469713 IGKV2D-40P01614 121 aaPredicted RBP1.19□□□□□ -2.22
VPS8-220ENST00000469713 GNG3P63215 75 aa1.19□□□□□ -2.22
VPS8-220ENST00000469713 ZNF846Q147U1 533 aa1.19□□□□□ -2.22
VPS8-220ENST00000469713 POU6F1Q14863 301 aa1.19□□□□□ -2.22
VPS8-220ENST00000469713 SURF2Q15527 256 aaPredicted RBP1.19□□□□□ -2.22
VPS8-220ENST00000469713 TEX36Q5VZQ5 186 aa1.19□□□□□ -2.22
VPS8-220ENST00000469713 C3orf33Q6P1S2 294 aa1.19□□□□□ -2.22
VPS8-220ENST00000469713 OOSP2Q86WS3 158 aa1.19□□□□□ -2.22
VPS8-220ENST00000469713 INTS1Q8N201 2190 aaKnown RBP1.19□□□□□ -2.22
VPS8-220ENST00000469713 OR13C4Q8NGS5 318 aa1.19□□□□□ -2.22
VPS8-220ENST00000469713 PFN4Q8NHR9 129 aa1.19□□□□□ -2.22
VPS8-220ENST00000469713 CT55Q8WUE5 264 aa1.19□□□□□ -2.22
VPS8-220ENST00000469713 TEP1Q99973 2627 aaKnown RBP1.19□□□□□ -2.22
VPS8-220ENST00000469713 COMMD5Q9GZQ3 224 aa1.19□□□□□ -2.22
VPS8-220ENST00000469713 MED29Q9NX70 200 aa1.19□□□□□ -2.22
VPS8-220ENST00000469713 SMPXQ9UHP9 88 aa1.19□□□□□ -2.22
VPS8-220ENST00000469713 KIF13BQ9NQT8 1826 aa1.18□□□□□ -2.22
VPS8-220ENST00000469713 FUOMA2VDF0 154 aa1.18□□□□□ -2.22
VPS8-220ENST00000469713 DPRXA6NFQ7 191 aa1.18□□□□□ -2.22
VPS8-220ENST00000469713 BUB1B-PAK6H3BSN5 160 aa1.18□□□□□ -2.22
VPS8-220ENST00000469713 MFSD11O43934 449 aa1.18□□□□□ -2.22
VPS8-220ENST00000469713 ATG12O94817 140 aa1.18□□□□□ -2.22
VPS8-220ENST00000469713 CRYZL1O95825 349 aa1.18□□□□□ -2.22
VPS8-220ENST00000469713 IFNA21P01568 189 aa1.18□□□□□ -2.22
VPS8-220ENST00000469713 SHBGP04278 402 aa1.18□□□□□ -2.22
VPS8-220ENST00000469713 SERPINE1P05121 402 aa1.18□□□□□ -2.22
VPS8-220ENST00000469713 SMIM10L2AP0DMW4 78 aa1.18□□□□□ -2.22
VPS8-220ENST00000469713 SMIM10L2BP0DMW5 78 aa1.18□□□□□ -2.22
VPS8-220ENST00000469713 G6PCP35575 357 aa1.18□□□□□ -2.22
VPS8-220ENST00000469713 ARPC4P59998 168 aa1.18□□□□□ -2.22
VPS8-220ENST00000469713 ALX1Q15699 326 aa1.18□□□□□ -2.22
VPS8-220ENST00000469713 SPANXN3Q5MJ09 141 aa1.18□□□□□ -2.22
VPS8-220ENST00000469713 AAED1Q7RTV5 226 aa1.18□□□□□ -2.22
VPS8-220ENST00000469713 CLVS1Q8IUQ0 354 aaPredicted RBP1.18□□□□□ -2.22
VPS8-220ENST00000469713 GDPD1Q8N9F7 314 aa1.18□□□□□ -2.22
VPS8-220ENST00000469713 OR10K1Q8NGX5 313 aa1.18□□□□□ -2.22
VPS8-220ENST00000469713 TOMM6Q96B49 74 aa1.18□□□□□ -2.22
VPS8-220ENST00000469713 SCGB3A1Q96QR1 104 aa1.18□□□□□ -2.22
VPS8-220ENST00000469713 BOLA2Q9H3K6 86 aa1.18□□□□□ -2.22
VPS8-220ENST00000469713 MED9Q9NWA0 146 aa1.18□□□□□ -2.22
VPS8-220ENST00000469713 NDUFAF1Q9Y375 327 aa1.18□□□□□ -2.22
VPS8-220ENST00000469713 ROCK1Q13464 1354 aa1.18□□□□□ -2.22
VPS8-220ENST00000469713 SYNMO15061 1565 aa1.17□□□□□ -2.22
VPS8-220ENST00000469713 STRCQ7RTU9 1775 aa1.17□□□□□ -2.22
VPS8-220ENST00000469713 IGKV3-7A0A075B6H7 116 aa1.17□□□□□ -2.22
VPS8-220ENST00000469713 hCG_1818297A0A087WSY0 165 aa1.17□□□□□ -2.22
VPS8-220ENST00000469713 A0A1B0GV72 72 aa1.17□□□□□ -2.22
VPS8-220ENST00000469713 A8MT66 165 aa1.17□□□□□ -2.22
VPS8-220ENST00000469713 GPR31O00270 319 aa1.17□□□□□ -2.22
VPS8-220ENST00000469713 OR2J2O76002 312 aa1.17□□□□□ -2.22
VPS8-220ENST00000469713 C1QBP02746 253 aa1.17□□□□□ -2.22
VPS8-220ENST00000469713 NBEAP1P0C6P0 100 aa1.17□□□□□ -2.22
VPS8-220ENST00000469713 GLRXP35754 106 aa1.17□□□□□ -2.22
VPS8-220ENST00000469713 HSPE1P61604 102 aaKnown RBP1.17□□□□□ -2.22
VPS8-220ENST00000469713 GNG5P63218 68 aa1.17□□□□□ -2.22
VPS8-220ENST00000469713 GOLT1AQ6ZVE7 132 aa1.17□□□□□ -2.22
VPS8-220ENST00000469713 OR11H6Q8NGC7 330 aa1.17□□□□□ -2.22
VPS8-220ENST00000469713 OR13C6PQ8NH95 151 aa1.17□□□□□ -2.22
VPS8-220ENST00000469713 H1FXQ92522 213 aaKnown RBP1.17□□□□□ -2.22
VPS8-220ENST00000469713 GINS4Q9BRT9 223 aa1.17□□□□□ -2.22
VPS8-220ENST00000469713 GINS3Q9BRX5 216 aa1.17□□□□□ -2.22
VPS8-220ENST00000469713 REG4Q9BYZ8 158 aa1.17□□□□□ -2.22
VPS8-220ENST00000469713 PARVBQ9HBI1 364 aa1.17□□□□□ -2.22
VPS8-220ENST00000469713 BATF3Q9NR55 127 aa1.17□□□□□ -2.22
VPS8-220ENST00000469713 C19orf12Q9NSK7 152 aa1.17□□□□□ -2.22
VPS8-220ENST00000469713 CYSLTR1Q9Y271 337 aa1.17□□□□□ -2.22
VPS8-220ENST00000469713 SLC35A3Q9Y2D2 325 aa1.17□□□□□ -2.22
VPS8-220ENST00000469713 ZNF106Q9H2Y7 1883 aaKnown RBP1.17□□□□□ -2.22
VPS8-220ENST00000469713 RTL1A6NKG5 1358 aa1.17□□□□□ -2.22
VPS8-220ENST00000469713 SRCAPQ6ZRS2 3230 aa1.17□□□□□ -2.22
VPS8-220ENST00000469713 MIA2Q96PC5 1412 aa1.16□□□□□ -2.22
VPS8-220ENST00000469713 MAST4O15021 2626 aa1.16□□□□□ -2.22
VPS8-220ENST00000469713 COL6A6A6NMZ7 2263 aa1.16□□□□□ -2.22
VPS8-220ENST00000469713 IGKV1D-42A0A075B6H8 117 aa1.16□□□□□ -2.22
VPS8-220ENST00000469713 TRAV9-1A0A075B6T8 112 aa1.16□□□□□ -2.22
VPS8-220ENST00000469713 CLDN25C9JDP6 229 aa1.16□□□□□ -2.22
VPS8-220ENST00000469713 PPP5D1E7EU14 171 aa1.16□□□□□ -2.22
VPS8-220ENST00000469713 HMGB3O15347 200 aaKnown RBP1.16□□□□□ -2.22
VPS8-220ENST00000469713 PIAS1O75925 651 aa1.16□□□□□ -2.22
VPS8-220ENST00000469713 IFNA14P01570 189 aa1.16□□□□□ -2.22
VPS8-220ENST00000469713 HTR1AP08908 422 aa1.16□□□□□ -2.22
VPS8-220ENST00000469713 RBP1P09455 135 aa1.16□□□□□ -2.22
VPS8-220ENST00000469713 SMIM17P0DL12 118 aa1.16□□□□□ -2.22
VPS8-220ENST00000469713 CRYGAP11844 174 aa1.16□□□□□ -2.22
VPS8-220ENST00000469713 IDO1P14902 403 aa1.16□□□□□ -2.22
VPS8-220ENST00000469713 SERPINB1P30740 379 aa1.16□□□□□ -2.22
VPS8-220ENST00000469713 SARNPP82979 210 aaKnown RBP1.16□□□□□ -2.22
VPS8-220ENST00000469713 C10orf55Q5SWW7 151 aa1.16□□□□□ -2.22
VPS8-220ENST00000469713 Q6ZQT0 140 aa1.16□□□□□ -2.22
VPS8-220ENST00000469713 PHF13Q86YI8 300 aaPredicted RBP1.16□□□□□ -2.22
VPS8-220ENST00000469713 EXOC3-AS1Q8N2X6 119 aa1.16□□□□□ -2.22
VPS8-220ENST00000469713 OR10J5Q8NHC4 309 aa1.16□□□□□ -2.22
VPS8-220ENST00000469713 TERB2Q8NHR7 220 aa1.16□□□□□ -2.22
VPS8-220ENST00000469713 SLC25A40Q8TBP6 338 aa1.16□□□□□ -2.22
VPS8-220ENST00000469713 PYDC1Q8WXC3 89 aa1.16□□□□□ -2.22
VPS8-220ENST00000469713 DNAJC9Q8WXX5 260 aa1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms