RNA–Protein interactions for RNA: ENST00000469670.1

TTC28-205, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-205ENST00000469670 GDF5OSQ5U4N7 250 aa12.87□□□□□ -0.35
TTC28-205ENST00000469670 Q8WTZ3 238 aa12.87□□□□□ -0.35
TTC28-205ENST00000469670 NRG4Q8WWG1 115 aa12.87□□□□□ -0.35
TTC28-205ENST00000469670 YTHDF2Q9Y5A9 579 aaKnown RBP12.87□□□□□ -0.35
TTC28-205ENST00000469670 A0A0B4J293 547 aa12.86□□□□□ -0.35
TTC28-205ENST00000469670 LOC102723971A0A1B0GUV8 181 aa12.86□□□□□ -0.35
TTC28-205ENST00000469670 HOXA1P49639 335 aaPredicted RBP12.86□□□□□ -0.35
TTC28-205ENST00000469670 DAD1P61803 113 aa12.86□□□□□ -0.35
TTC28-205ENST00000469670 SIGLEC15Q6ZMC9 328 aa12.86□□□□□ -0.35
TTC28-205ENST00000469670 ZNRF2Q8NHG8 242 aa12.86□□□□□ -0.35
TTC28-205ENST00000469670 IGKV1-5P01602 117 aa12.85□□□□□ -0.35
TTC28-205ENST00000469670 HBE1P02100 147 aa12.85□□□□□ -0.35
TTC28-205ENST00000469670 IGLC1P0CG04 106 aa12.85□□□□□ -0.35
TTC28-205ENST00000469670 HRH1P35367 487 aa12.85□□□□□ -0.35
TTC28-205ENST00000469670 ETV6P41212 452 aa12.85□□□□□ -0.35
TTC28-205ENST00000469670 TAS2R20P59543 309 aa12.85□□□□□ -0.35
TTC28-205ENST00000469670 DEFB1P60022 68 aa12.85□□□□□ -0.35
TTC28-205ENST00000469670 GSG1LQ6UXU4 331 aa12.85□□□□□ -0.35
TTC28-205ENST00000469670 OR1S2Q8NGQ3 325 aa12.85□□□□□ -0.35
TTC28-205ENST00000469670 CNBD2Q96M20 576 aa12.85□□□□□ -0.35
TTC28-205ENST00000469670 PDCD10Q9BUL8 212 aa12.85□□□□□ -0.35
TTC28-205ENST00000469670 GOLT1BQ9Y3E0 138 aa12.85□□□□□ -0.35
TTC28-205ENST00000469670 P0C879 139 aa12.84□□□□□ -0.35
TTC28-205ENST00000469670 HLA-DMAP28067 261 aa12.84□□□□□ -0.35
TTC28-205ENST00000469670 TSPAN5P62079 268 aa12.84□□□□□ -0.35
TTC28-205ENST00000469670 DHODHQ02127 395 aa12.84□□□□□ -0.35
TTC28-205ENST00000469670 USF2Q15853 346 aaPredicted RBP12.84□□□□□ -0.35
TTC28-205ENST00000469670 LYSMD2Q8IV50 215 aa12.84□□□□□ -0.35
TTC28-205ENST00000469670 ZNF709Q8N972 641 aa12.84□□□□□ -0.35
TTC28-205ENST00000469670 S100A16Q96FQ6 103 aaKnown RBP12.84□□□□□ -0.35
TTC28-205ENST00000469670 SAV1Q9H4B6 383 aaPredicted RBP12.84□□□□□ -0.35
TTC28-205ENST00000469670 ENY2Q9NPA8 101 aa12.84□□□□□ -0.35
TTC28-205ENST00000469670 DMBT1Q9UGM3 2413 aaPredicted RBP12.83□□□□□ -0.35
TTC28-205ENST00000469670 RPS10-NUDT3A0A1W2PQS6 291 aa12.83□□□□□ -0.36
TTC28-205ENST00000469670 BUB3O43684 328 aa12.83□□□□□ -0.36
TTC28-205ENST00000469670 IL4P05112 153 aa12.83□□□□□ -0.36
TTC28-205ENST00000469670 YPEL3P61236 119 aaPredicted RBP12.83□□□□□ -0.36
TTC28-205ENST00000469670 C1orf158Q8N1D5 194 aa12.83□□□□□ -0.36
TTC28-205ENST00000469670 OR4B1Q8NGF8 309 aa12.83□□□□□ -0.36
TTC28-205ENST00000469670 C7orf50Q9BRJ6 194 aaKnown RBP12.83□□□□□ -0.36
TTC28-205ENST00000469670 OR10J1P30954 320 aa12.82□□□□□ -0.36
TTC28-205ENST00000469670 RND2P52198 227 aa12.82□□□□□ -0.36
TTC28-205ENST00000469670 AKR1C2P52895 323 aa12.82□□□□□ -0.36
TTC28-205ENST00000469670 UCP3P55916 312 aa12.82□□□□□ -0.36
TTC28-205ENST00000469670 RRN3P1Q2M238 152 aa12.82□□□□□ -0.36
TTC28-205ENST00000469670 BSXQ3C1V8 233 aa12.82□□□□□ -0.36
TTC28-205ENST00000469670 TMEM69Q5SWH9 247 aa12.82□□□□□ -0.36
TTC28-205ENST00000469670 FOXI2Q6ZQN5 318 aa12.82□□□□□ -0.36
TTC28-205ENST00000469670 LINC00052Q96N35 136 aa12.82□□□□□ -0.36
TTC28-205ENST00000469670 CLUHP3Q96NS8 147 aa12.82□□□□□ -0.36
TTC28-205ENST00000469670 SLC35B3Q9H1N7 401 aa12.82□□□□□ -0.36
TTC28-205ENST00000469670 EPM2AB3EWF7 344 aa12.81□□□□□ -0.36
TTC28-205ENST00000469670 GSTZ1O43708 216 aaPredicted RBP12.81□□□□□ -0.36
TTC28-205ENST00000469670 GABARAPL2P60520 117 aa12.81□□□□□ -0.36
TTC28-205ENST00000469670 PRSS54Q6PEW0 395 aa12.81□□□□□ -0.36
TTC28-205ENST00000469670 SPARTQ8N0X7 666 aa12.81□□□□□ -0.36
TTC28-205ENST00000469670 LOC100506127A0A0U1RQW1 187 aa12.8□□□□□ -0.36
TTC28-205ENST00000469670 PRSS3P35030 304 aa12.8□□□□□ -0.36
TTC28-205ENST00000469670 ALDH3B2P48448 385 aa12.8□□□□□ -0.36
TTC28-205ENST00000469670 HSPA13P48723 471 aa12.8□□□□□ -0.36
TTC28-205ENST00000469670 KRTAP10-2P60368 255 aa12.8□□□□□ -0.36
TTC28-205ENST00000469670 PSG9Q00887 426 aa12.8□□□□□ -0.36
TTC28-205ENST00000469670 FCGR1BQ92637 280 aa12.8□□□□□ -0.36
TTC28-205ENST00000469670 SCPEP1Q9HB40 452 aa12.8□□□□□ -0.36
TTC28-205ENST00000469670 TMEM127O75204 238 aa12.79□□□□□ -0.36
TTC28-205ENST00000469670 ATG12O94817 140 aa12.79□□□□□ -0.36
TTC28-205ENST00000469670 NUDT3O95989 172 aa12.79□□□□□ -0.36
TTC28-205ENST00000469670 SLC25A4P12235 298 aa12.79□□□□□ -0.36
TTC28-205ENST00000469670 ID1P41134 155 aa12.79□□□□□ -0.36
TTC28-205ENST00000469670 CCL18P55774 89 aa12.79□□□□□ -0.36
TTC28-205ENST00000469670 ZNF79Q15937 498 aa12.79□□□□□ -0.36
TTC28-205ENST00000469670 UBE2NLQ5JXB2 153 aa12.79□□□□□ -0.36
TTC28-205ENST00000469670 WDR12Q9GZL7 423 aaKnown RBP12.79□□□□□ -0.36
TTC28-205ENST00000469670 MAGT1Q9H0U3 335 aa12.79□□□□□ -0.36
TTC28-205ENST00000469670 LINC00588Q9Y4M8 146 aa12.79□□□□□ -0.36
TTC28-205ENST00000469670 INAFM2P0DMQ5 153 aa12.78□□□□□ -0.36
TTC28-205ENST00000469670 HTR2BP41595 481 aa12.78□□□□□ -0.36
TTC28-205ENST00000469670 RORCP51449 518 aa12.78□□□□□ -0.36
TTC28-205ENST00000469670 COQ8AQ8NI60 647 aa12.78□□□□□ -0.36
TTC28-205ENST00000469670 TP53RKQ96S44 253 aa12.78□□□□□ -0.36
TTC28-205ENST00000469670 KLK11Q9UBX7 282 aa12.78□□□□□ -0.36
TTC28-205ENST00000469670 TOMM40O96008 361 aa12.77□□□□□ -0.37
TTC28-205ENST00000469670 RD3LP0DJH9 198 aa12.77□□□□□ -0.37
TTC28-205ENST00000469670 PGAM2P15259 253 aa12.77□□□□□ -0.37
TTC28-205ENST00000469670 PSMB3P49720 205 aa12.77□□□□□ -0.37
TTC28-205ENST00000469670 RND3P61587 244 aa12.77□□□□□ -0.37
TTC28-205ENST00000469670 FAM78BQ5VT40 261 aa12.77□□□□□ -0.37
TTC28-205ENST00000469670 SPATA31B1PQ5VZV4 182 aa12.77□□□□□ -0.37
TTC28-205ENST00000469670 A0A0G2JRQ6 117 aa12.76□□□□□ -0.37
TTC28-205ENST00000469670 F5H768 121 aa12.76□□□□□ -0.37
TTC28-205ENST00000469670 F6UB75 175 aa12.76□□□□□ -0.37
TTC28-205ENST00000469670 PI3P19957 117 aa12.76□□□□□ -0.37
TTC28-205ENST00000469670 PAX9P55771 341 aa12.76□□□□□ -0.37
TTC28-205ENST00000469670 SPCS3P61009 180 aa12.76□□□□□ -0.37
TTC28-205ENST00000469670 TRIM16LQ309B1 348 aa12.76□□□□□ -0.37
TTC28-205ENST00000469670 EBLN2Q6P2I7 272 aa12.76□□□□□ -0.37
TTC28-205ENST00000469670 SAMD12Q8N8I0 201 aa12.76□□□□□ -0.37
TTC28-205ENST00000469670 OR51G1Q8NGK1 321 aa12.76□□□□□ -0.37
TTC28-205ENST00000469670 RNASEH2CQ8TDP1 164 aaKnown RBP12.76□□□□□ -0.37
TTC28-205ENST00000469670 GPX8Q8TED1 209 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms