RNA–Protein interactions for RNA: ENST00000469278.5

SOX2-OT-204, SOX2 overlapping transcript, humanhuman

TSL 4

Gene SOX2-OT, Length 561 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-204ENST00000469278 CLPSP04118 112 aa1.13□□□□□ -2.23
SOX2-OT-204ENST00000469278 CTXN2P0C2S0 81 aa1.13□□□□□ -2.23
SOX2-OT-204ENST00000469278 OR4E1P0C645 316 aa1.13□□□□□ -2.23
SOX2-OT-204ENST00000469278 ARL14EPLP0DKL9 152 aa1.13□□□□□ -2.23
SOX2-OT-204ENST00000469278 MGST1P10620 155 aaKnown RBP1.13□□□□□ -2.23
SOX2-OT-204ENST00000469278 BASP1P80723 227 aaKnown RBP1.13□□□□□ -2.23
SOX2-OT-204ENST00000469278 Q6Q795 121 aa1.13□□□□□ -2.23
SOX2-OT-204ENST00000469278 OR52L1Q8NGH7 329 aa1.13□□□□□ -2.23
SOX2-OT-204ENST00000469278 AQP3Q92482 292 aa1.13□□□□□ -2.23
SOX2-OT-204ENST00000469278 PRAP1Q96NZ9 151 aa1.13□□□□□ -2.23
SOX2-OT-204ENST00000469278 IDI2-AS1Q9NZ38 188 aa1.13□□□□□ -2.23
SOX2-OT-204ENST00000469278 OPTCQ9UBM4 332 aa1.13□□□□□ -2.23
SOX2-OT-204ENST00000469278 SMARCA4P51532 1647 aa1.13□□□□□ -2.23
SOX2-OT-204ENST00000469278 CCDC144AA2RUR9 1427 aa1.13□□□□□ -2.23
SOX2-OT-204ENST00000469278 PIK3C2GO75747 1445 aa1.13□□□□□ -2.23
SOX2-OT-204ENST00000469278 ALPK2Q86TB3 2170 aa1.13□□□□□ -2.23
SOX2-OT-204ENST00000469278 HECW2Q9P2P5 1572 aa1.13□□□□□ -2.23
SOX2-OT-204ENST00000469278 RP1L1Q8IWN7 2480 aaPredicted RBP1.12□□□□□ -2.23
SOX2-OT-204ENST00000469278 ROBO3Q96MS0 1386 aa1.12□□□□□ -2.23
SOX2-OT-204ENST00000469278 TRAV1-1A0A0B4J248 108 aa1.12□□□□□ -2.23
SOX2-OT-204ENST00000469278 C7orf71A4D174 169 aa1.12□□□□□ -2.23
SOX2-OT-204ENST00000469278 CTSDP07339 412 aaPredicted RBP1.12□□□□□ -2.23
SOX2-OT-204ENST00000469278 BAALC-AS2P0C853 105 aa1.12□□□□□ -2.23
SOX2-OT-204ENST00000469278 LYNX1P0DP58 116 aa1.12□□□□□ -2.23
SOX2-OT-204ENST00000469278 HSD11B1P28845 292 aa1.12□□□□□ -2.23
SOX2-OT-204ENST00000469278 G6PCP35575 357 aa1.12□□□□□ -2.23
SOX2-OT-204ENST00000469278 SRP14P37108 136 aaKnown RBP1.12□□□□□ -2.23
SOX2-OT-204ENST00000469278 EIF5AP63241 154 aaKnown RBP1.12□□□□□ -2.23
SOX2-OT-204ENST00000469278 LINC01554Q52M75 96 aa1.12□□□□□ -2.23
SOX2-OT-204ENST00000469278 RNASE10Q5GAN6 216 aaKnown RBP1.12□□□□□ -2.23
SOX2-OT-204ENST00000469278 C10orf55Q5SWW7 151 aa1.12□□□□□ -2.23
SOX2-OT-204ENST00000469278 UNQ6190/PRO20217Q6UXQ8 127 aa1.12□□□□□ -2.23
SOX2-OT-204ENST00000469278 LINC00311Q8N616 119 aa1.12□□□□□ -2.23
SOX2-OT-204ENST00000469278 OR52R1Q8NGF1 315 aa1.12□□□□□ -2.23
SOX2-OT-204ENST00000469278 HIST1H2BLQ99880 126 aa1.12□□□□□ -2.23
SOX2-OT-204ENST00000469278 C9orf16Q9BUW7 83 aa1.12□□□□□ -2.23
SOX2-OT-204ENST00000469278 C6orf62Q9GZU0 229 aaPredicted RBP1.12□□□□□ -2.23
SOX2-OT-204ENST00000469278 EPDR1Q9UM22 224 aa1.12□□□□□ -2.23
SOX2-OT-204ENST00000469278 UTP11Q9Y3A2 253 aaKnown RBP1.12□□□□□ -2.23
SOX2-OT-204ENST00000469278 PLXND1Q9Y4D7 1925 aa1.11□□□□□ -2.23
SOX2-OT-204ENST00000469278 CLDN25C9JDP6 229 aa1.11□□□□□ -2.23
SOX2-OT-204ENST00000469278 HMGB3O15347 200 aaKnown RBP1.11□□□□□ -2.23
SOX2-OT-204ENST00000469278 UBL3O95164 117 aa1.11□□□□□ -2.23
SOX2-OT-204ENST00000469278 TEX36Q5VZQ5 186 aa1.11□□□□□ -2.23
SOX2-OT-204ENST00000469278 LCA10Q71F78 164 aa1.11□□□□□ -2.23
SOX2-OT-204ENST00000469278 C15orf53Q8NAA6 179 aa1.11□□□□□ -2.23
SOX2-OT-204ENST00000469278 ZNF106Q9H2Y7 1883 aaKnown RBP1.11□□□□□ -2.23
SOX2-OT-204ENST00000469278 HECW1Q76N89 1606 aa1.11□□□□□ -2.23
SOX2-OT-204ENST00000469278 DIDO1Q9BTC0 2240 aaKnown RBP1.1□□□□□ -2.23
SOX2-OT-204ENST00000469278 IGKV2D-26A0A0A0MRZ7 120 aa1.1□□□□□ -2.23
SOX2-OT-204ENST00000469278 C19orf84I3L1E1 186 aa1.1□□□□□ -2.23
SOX2-OT-204ENST00000469278 CST8O60676 142 aa1.1□□□□□ -2.23
SOX2-OT-204ENST00000469278 SERPINB9P50453 376 aa1.1□□□□□ -2.23
SOX2-OT-204ENST00000469278 RAB4BP61018 213 aa1.1□□□□□ -2.23
SOX2-OT-204ENST00000469278 ERVS71-1P61550 626 aa1.1□□□□□ -2.23
SOX2-OT-204ENST00000469278 KRR1Q13601 381 aaKnown RBP1.1□□□□□ -2.23
SOX2-OT-204ENST00000469278 TSNQ15631 228 aaKnown RBP1.1□□□□□ -2.23
SOX2-OT-204ENST00000469278 Q8N2B8 174 aa1.1□□□□□ -2.23
SOX2-OT-204ENST00000469278 OR11H6Q8NGC7 330 aa1.1□□□□□ -2.23
SOX2-OT-204ENST00000469278 OR13D1Q8NGV5 346 aa1.1□□□□□ -2.23
SOX2-OT-204ENST00000469278 OR10X1Q8NGY0 326 aa1.1□□□□□ -2.23
SOX2-OT-204ENST00000469278 OR2T10Q8NGZ9 312 aa1.1□□□□□ -2.23
SOX2-OT-204ENST00000469278 OR4C6Q8NH72 309 aa1.1□□□□□ -2.23
SOX2-OT-204ENST00000469278 ACER3Q9NUN7 267 aa1.1□□□□□ -2.23
SOX2-OT-204ENST00000469278 KLK9Q9UKQ9 250 aa1.1□□□□□ -2.23
SOX2-OT-204ENST00000469278 ARL5AQ9Y689 179 aa1.1□□□□□ -2.23
SOX2-OT-204ENST00000469278 DOCK3Q8IZD9 2030 aa1.1□□□□□ -2.23
SOX2-OT-204ENST00000469278 TRAV3A0A0B4J244 114 aa1.09□□□□□ -2.23
SOX2-OT-204ENST00000469278 OR1I1O60431 355 aa1.09□□□□□ -2.23
SOX2-OT-204ENST00000469278 HYPMO75409 117 aa1.09□□□□□ -2.23
SOX2-OT-204ENST00000469278 IFNA7P01567 189 aa1.09□□□□□ -2.23
SOX2-OT-204ENST00000469278 CST2P09228 141 aa1.09□□□□□ -2.23
SOX2-OT-204ENST00000469278 MIFP14174 115 aa1.09□□□□□ -2.23
SOX2-OT-204ENST00000469278 SSR2P43308 183 aa1.09□□□□□ -2.23
SOX2-OT-204ENST00000469278 PIGPP57054 158 aa1.09□□□□□ -2.23
SOX2-OT-204ENST00000469278 RHOGP84095 191 aa1.09□□□□□ -2.23
SOX2-OT-204ENST00000469278 TAF1AQ15573 450 aaPredicted RBP1.09□□□□□ -2.23
SOX2-OT-204ENST00000469278 BRMS1LQ5PSV4 323 aa1.09□□□□□ -2.23
SOX2-OT-204ENST00000469278 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.09□□□□□ -2.23
SOX2-OT-204ENST00000469278 GOLT1AQ6ZVE7 132 aa1.09□□□□□ -2.23
SOX2-OT-204ENST00000469278 S100A7AQ86SG5 101 aa1.09□□□□□ -2.23
SOX2-OT-204ENST00000469278 C12orf45Q8N5I9 185 aaPredicted RBP1.09□□□□□ -2.23
SOX2-OT-204ENST00000469278 TEX47Q8TBZ9 253 aa1.09□□□□□ -2.23
SOX2-OT-204ENST00000469278 WFDC5Q8TCV5 224 aa1.09□□□□□ -2.23
SOX2-OT-204ENST00000469278 SFT2D1Q8WV19 159 aa1.09□□□□□ -2.23
SOX2-OT-204ENST00000469278 PSTPIP2Q9H939 334 aa1.09□□□□□ -2.23
SOX2-OT-204ENST00000469278 NEO1Q92859 1461 aa1.09□□□□□ -2.24
SOX2-OT-204ENST00000469278 FAM159BA6NKW6 160 aa1.08□□□□□ -2.24
SOX2-OT-204ENST00000469278 OR2T1O43869 369 aa1.08□□□□□ -2.24
SOX2-OT-204ENST00000469278 BCL2L15Q5TBC7 163 aa1.08□□□□□ -2.24
SOX2-OT-204ENST00000469278 HACD4Q5VWC8 232 aa1.08□□□□□ -2.24
SOX2-OT-204ENST00000469278 LINC00301Q8NCQ3 95 aa1.08□□□□□ -2.24
SOX2-OT-204ENST00000469278 YPEL2Q96QA6 119 aa1.08□□□□□ -2.24
SOX2-OT-204ENST00000469278 MRPL57Q9BQC6 102 aaKnown RBP1.08□□□□□ -2.24
SOX2-OT-204ENST00000469278 IMUPQ9GZP8 106 aa1.08□□□□□ -2.24
SOX2-OT-204ENST00000469278 PARVBQ9HBI1 364 aa1.08□□□□□ -2.24
SOX2-OT-204ENST00000469278 EML6Q6ZMW3 1958 aa1.07□□□□□ -2.24
SOX2-OT-204ENST00000469278 TRBV19A0A075B6N1 114 aa1.07□□□□□ -2.24
SOX2-OT-204ENST00000469278 A0A087WX48 190 aa1.07□□□□□ -2.24
SOX2-OT-204ENST00000469278 TRGV10A0A0A0MS01 117 aa1.07□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms