RNA–Protein interactions for RNA: ENST00000467915.1

SGSM3-206, Transcript of small G protein signaling modulator 3, human

TSL 3

Gene SGSM3, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SGSM3-206	ENST00000467915	RND3	P61587	244 aa		11.52	□□□□□ -0.57
SGSM3-206	ENST00000467915	PVRIG	Q6DKI7	326 aa		11.52	□□□□□ -0.57
SGSM3-206	ENST00000467915	DUSP18	Q8NEJ0	188 aa		11.52	□□□□□ -0.57
SGSM3-206	ENST00000467915	GATAD1	Q8WUU5	269 aa		11.52	□□□□□ -0.57
SGSM3-206	ENST00000467915	FNDC4	Q9H6D8	234 aa	Predicted RBP	11.52	□□□□□ -0.57
SGSM3-206	ENST00000467915	FBXL17	Q9UF56	701 aa		11.52	□□□□□ -0.57
SGSM3-206	ENST00000467915	KCNIP3	Q9Y2W7	256 aa		11.52	□□□□□ -0.57
SGSM3-206	ENST00000467915	TRAV6	A0A075B6T7	132 aa		11.51	□□□□□ -0.57
SGSM3-206	ENST00000467915	CA1	P00915	261 aa	Predicted RBP	11.51	□□□□□ -0.57
SGSM3-206	ENST00000467915	NPBWR1	P48145	328 aa		11.51	□□□□□ -0.57
SGSM3-206	ENST00000467915	ZNF600	Q6ZNG1	722 aa		11.51	□□□□□ -0.57
SGSM3-206	ENST00000467915	NRARP	Q7Z6K4	114 aa		11.51	□□□□□ -0.57
SGSM3-206	ENST00000467915	CENPS	Q8N2Z9	138 aa		11.51	□□□□□ -0.57
SGSM3-206	ENST00000467915	C11orf45	Q8TAV5	145 aa		11.51	□□□□□ -0.57
SGSM3-206	ENST00000467915	GINS3	Q9BRX5	216 aa		11.51	□□□□□ -0.57
SGSM3-206	ENST00000467915	FLVCR2	Q9UPI3	526 aa		11.51	□□□□□ -0.57
SGSM3-206	ENST00000467915	DNAH6	Q9C0G6	4158 aa		11.51	□□□□□ -0.57
SGSM3-206	ENST00000467915	C3orf85	A0A1B0GTC6	90 aa		11.5	□□□□□ -0.57
SGSM3-206	ENST00000467915	DNASE2	O00115	360 aa	Predicted RBP	11.5	□□□□□ -0.57
SGSM3-206	ENST00000467915	IFNA17	P01571	189 aa		11.5	□□□□□ -0.57
SGSM3-206	ENST00000467915	GIG44	P09565	113 aa	Predicted RBP	11.5	□□□□□ -0.57
SGSM3-206	ENST00000467915	H2AFB2	P0C5Z0	115 aa		11.5	□□□□□ -0.57
SGSM3-206	ENST00000467915	SNCA	P37840	140 aa		11.5	□□□□□ -0.57
SGSM3-206	ENST00000467915	RPL11	P62913	178 aa	Known RBP	11.5	□□□□□ -0.57
SGSM3-206	ENST00000467915	PAFAH1B2	P68402	229 aa		11.5	□□□□□ -0.57
SGSM3-206	ENST00000467915	LGALS9C	Q6DKI2	356 aa		11.5	□□□□□ -0.57
SGSM3-206	ENST00000467915		Q6ZRM9	215 aa		11.5	□□□□□ -0.57
SGSM3-206	ENST00000467915	HECTD4	Q9Y4D8	3996 aa		11.49	□□□□□ -0.57
SGSM3-206	ENST00000467915	INS-IGF2	F8WCM5	200 aa		11.49	□□□□□ -0.57
SGSM3-206	ENST00000467915	AKR1C2	P52895	323 aa		11.49	□□□□□ -0.57
SGSM3-206	ENST00000467915	PRR20E	P86478	221 aa		11.49	□□□□□ -0.57
SGSM3-206	ENST00000467915	PRR20C	P86479	221 aa		11.49	□□□□□ -0.57
SGSM3-206	ENST00000467915	PRR20D	P86480	221 aa		11.49	□□□□□ -0.57
SGSM3-206	ENST00000467915	PRR20B	P86481	221 aa		11.49	□□□□□ -0.57
SGSM3-206	ENST00000467915	PRR20A	P86496	221 aa		11.49	□□□□□ -0.57
SGSM3-206	ENST00000467915	TMEM128	Q5BJH2	165 aa		11.49	□□□□□ -0.57
SGSM3-206	ENST00000467915	SLC35G3	Q8N808	338 aa		11.49	□□□□□ -0.57
SGSM3-206	ENST00000467915	KRTAP17-1	Q9BYP8	105 aa		11.49	□□□□□ -0.57
SGSM3-206	ENST00000467915	C20orf85	Q9H1P6	137 aa		11.49	□□□□□ -0.57
SGSM3-206	ENST00000467915	C11orf68	Q9H3H3	251 aa	Known RBP	11.49	□□□□□ -0.57
SGSM3-206	ENST00000467915	NAA60	Q9H7X0	242 aa		11.49	□□□□□ -0.57
SGSM3-206	ENST00000467915	NUDT15	Q9NV35	164 aa		11.49	□□□□□ -0.57
SGSM3-206	ENST00000467915	CRYM-AS1	A6NIL9	109 aa		11.48	□□□□□ -0.57
SGSM3-206	ENST00000467915	IGKV1-17	P01599	117 aa		11.48	□□□□□ -0.57
SGSM3-206	ENST00000467915	ANXA3	P12429	323 aa		11.48	□□□□□ -0.57
SGSM3-206	ENST00000467915	VAMP1	P23763	118 aa		11.48	□□□□□ -0.57
SGSM3-206	ENST00000467915	TMEM187	Q14656	261 aa		11.48	□□□□□ -0.57
SGSM3-206	ENST00000467915	RGS21	Q2M5E4	152 aa		11.48	□□□□□ -0.57
SGSM3-206	ENST00000467915	RABAC1	Q9UI14	185 aa		11.48	□□□□□ -0.57
SGSM3-206	ENST00000467915	KNCN	A6PVL3	124 aa		11.47	□□□□□ -0.57
SGSM3-206	ENST00000467915	CLN5	O75503	358 aa		11.47	□□□□□ -0.57
SGSM3-206	ENST00000467915	B3GALNT1	O75752	331 aa		11.47	□□□□□ -0.57
SGSM3-206	ENST00000467915	PTTG1	O95997	202 aa		11.47	□□□□□ -0.57
SGSM3-206	ENST00000467915	RBMY1A1	P0DJD3	496 aa	Known RBP	11.47	□□□□□ -0.57
SGSM3-206	ENST00000467915	RBMY1C	P0DJD4	496 aa		11.47	□□□□□ -0.57
SGSM3-206	ENST00000467915	ANXA7	P20073	488 aa	Known RBP	11.47	□□□□□ -0.57
SGSM3-206	ENST00000467915	NPPC	P23582	126 aa		11.47	□□□□□ -0.57
SGSM3-206	ENST00000467915	HOXA1	P49639	335 aa	Predicted RBP	11.47	□□□□□ -0.57
SGSM3-206	ENST00000467915	UBE2M	P61081	183 aa	Known RBP	11.47	□□□□□ -0.57
SGSM3-206	ENST00000467915	DHODH	Q02127	395 aa		11.47	□□□□□ -0.57
SGSM3-206	ENST00000467915	RBMY1F	Q15415	496 aa	Known RBP	11.47	□□□□□ -0.57
SGSM3-206	ENST00000467915	TRIM16L	Q309B1	348 aa		11.47	□□□□□ -0.57
SGSM3-206	ENST00000467915	TIGIT	Q495A1	244 aa		11.47	□□□□□ -0.57
SGSM3-206	ENST00000467915	C4orf46	Q504U0	113 aa		11.47	□□□□□ -0.57
SGSM3-206	ENST00000467915	TMEM230	Q96A57	120 aa		11.47	□□□□□ -0.57
SGSM3-206	ENST00000467915	HERC2	O95714	4834 aa		11.46	□□□□□ -0.57
SGSM3-206	ENST00000467915	TRAV2	A0A0B4J234	112 aa		11.46	□□□□□ -0.57
SGSM3-206	ENST00000467915	INMT-MINDY4	F8WBC2	141 aa		11.46	□□□□□ -0.57
SGSM3-206	ENST00000467915		K7EQG2	157 aa		11.46	□□□□□ -0.57
SGSM3-206	ENST00000467915	CD5	P06127	495 aa		11.46	□□□□□ -0.57
SGSM3-206	ENST00000467915	OR5AC1	P0C628	307 aa		11.46	□□□□□ -0.57
SGSM3-206	ENST00000467915	OR4E1	P0C645	316 aa		11.46	□□□□□ -0.57
SGSM3-206	ENST00000467915	UCP1	P25874	307 aa		11.46	□□□□□ -0.57
SGSM3-206	ENST00000467915	CRYBB3	P26998	211 aa		11.46	□□□□□ -0.57
SGSM3-206	ENST00000467915	OPRK1	P41145	380 aa		11.46	□□□□□ -0.57
SGSM3-206	ENST00000467915	BSX	Q3C1V8	233 aa		11.46	□□□□□ -0.57
SGSM3-206	ENST00000467915		Q8NAQ8	132 aa		11.46	□□□□□ -0.57
SGSM3-206	ENST00000467915	STXBP6	Q8NFX7	210 aa		11.46	□□□□□ -0.57
SGSM3-206	ENST00000467915	OR4X1	Q8NH49	305 aa		11.46	□□□□□ -0.57
SGSM3-206	ENST00000467915	LHFPL5	Q8TAF8	219 aa		11.46	□□□□□ -0.57
SGSM3-206	ENST00000467915	AGRN	O00468	2067 aa		11.45	□□□□□ -0.58
SGSM3-206	ENST00000467915	ATG12	O94817	140 aa		11.45	□□□□□ -0.58
SGSM3-206	ENST00000467915	SFT2D2	O95562	160 aa		11.45	□□□□□ -0.58
SGSM3-206	ENST00000467915	IFNA4	P05014	189 aa		11.45	□□□□□ -0.58
SGSM3-206	ENST00000467915	ZNF688	P0C7X2	276 aa		11.45	□□□□□ -0.58
SGSM3-206	ENST00000467915	C4BPB	P20851	252 aa		11.45	□□□□□ -0.58
SGSM3-206	ENST00000467915	P2RY1	P47900	373 aa		11.45	□□□□□ -0.58
SGSM3-206	ENST00000467915	SUB1	P53999	127 aa	Known RBP eCLIP	11.45	□□□□□ -0.58
SGSM3-206	ENST00000467915	PPP1R1A	Q13522	171 aa		11.45	□□□□□ -0.58
SGSM3-206	ENST00000467915	TRPT1	Q86TN4	253 aa	Known RBP	11.45	□□□□□ -0.58
SGSM3-206	ENST00000467915	STH	Q8IWL8	128 aa		11.45	□□□□□ -0.58
SGSM3-206	ENST00000467915	METTL26	Q96S19	204 aa		11.45	□□□□□ -0.58
SGSM3-206	ENST00000467915	PDCD10	Q9BUL8	212 aa		11.45	□□□□□ -0.58
SGSM3-206	ENST00000467915	MFF	Q9GZY8	342 aa		11.45	□□□□□ -0.58
SGSM3-206	ENST00000467915	TMEM222	Q9H0R3	208 aa		11.45	□□□□□ -0.58
SGSM3-206	ENST00000467915	IGHV4-28	A0A0C4DH34	117 aa		11.44	□□□□□ -0.58
SGSM3-206	ENST00000467915	CORT	O00230	105 aa		11.44	□□□□□ -0.58
SGSM3-206	ENST00000467915	LGI3	Q8N145	548 aa		11.44	□□□□□ -0.58
SGSM3-206	ENST00000467915	RNASE11	Q8TAA1	199 aa	Known RBP	11.44	□□□□□ -0.58
SGSM3-206	ENST00000467915	C2CD4C	Q8TF44	421 aa		11.44	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 38 ms