RNA–Protein interactions for RNA: ENST00000467272.6

UBR4-211, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-211ENST00000467272 TMEM170AQ8WVE7 144 aa8.6□□□□□ -1.03
UBR4-211ENST00000467272 S100A16Q96FQ6 103 aaKnown RBP8.6□□□□□ -1.03
UBR4-211ENST00000467272 RFNGQ9Y644 331 aa8.6□□□□□ -1.03
UBR4-211ENST00000467272 TRAV30A0A087WSZ9 112 aa8.59□□□□□ -1.03
UBR4-211ENST00000467272 A0A0G2JRQ6 117 aa8.59□□□□□ -1.03
UBR4-211ENST00000467272 TEX48A0A1B0GUV7 120 aa8.59□□□□□ -1.03
UBR4-211ENST00000467272 SOCS3O14543 225 aa8.59□□□□□ -1.03
UBR4-211ENST00000467272 NXPH3O95157 252 aa8.59□□□□□ -1.03
UBR4-211ENST00000467272 HNRNPCP07910 306 aaKnown RBP eCLIP8.59□□□□□ -1.03
UBR4-211ENST00000467272 HLA-DMAP28067 261 aa8.59□□□□□ -1.03
UBR4-211ENST00000467272 ETV6P41212 452 aa8.59□□□□□ -1.03
UBR4-211ENST00000467272 HSPA13P48723 471 aa8.59□□□□□ -1.03
UBR4-211ENST00000467272 SNRPD3P62318 126 aaKnown RBP8.59□□□□□ -1.03
UBR4-211ENST00000467272 UBE2NLQ5JXB2 153 aa8.59□□□□□ -1.03
UBR4-211ENST00000467272 TMEM88Q6PEY1 159 aa8.59□□□□□ -1.03
UBR4-211ENST00000467272 IZUMO2Q6UXV1 221 aa8.59□□□□□ -1.03
UBR4-211ENST00000467272 UBE2DNLQ8IWF7 75 aa8.59□□□□□ -1.03
UBR4-211ENST00000467272 C1orf158Q8N1D5 194 aa8.59□□□□□ -1.03
UBR4-211ENST00000467272 ZNRF2Q8NHG8 242 aa8.59□□□□□ -1.03
UBR4-211ENST00000467272 TP53RKQ96S44 253 aa8.59□□□□□ -1.03
UBR4-211ENST00000467272 NIPSNAP3BQ9BS92 247 aa8.59□□□□□ -1.03
UBR4-211ENST00000467272 SRRM2Q9UQ35 2752 aaKnown RBP8.58□□□□□ -1.04
UBR4-211ENST00000467272 ANKRD65E5RJM6 399 aa8.58□□□□□ -1.04
UBR4-211ENST00000467272 PRSS3P35030 304 aa8.58□□□□□ -1.04
UBR4-211ENST00000467272 EIF2B2P49770 351 aaKnown RBP8.58□□□□□ -1.04
UBR4-211ENST00000467272 SUB1P53999 127 aaKnown RBP eCLIP8.58□□□□□ -1.04
UBR4-211ENST00000467272 DEFB1P60022 68 aa8.58□□□□□ -1.04
UBR4-211ENST00000467272 DHODHQ02127 395 aa8.58□□□□□ -1.04
UBR4-211ENST00000467272 ZNF79Q15937 498 aa8.58□□□□□ -1.04
UBR4-211ENST00000467272 TMEM69Q5SWH9 247 aa8.58□□□□□ -1.04
UBR4-211ENST00000467272 LHFPL1Q86WI0 220 aa8.58□□□□□ -1.04
UBR4-211ENST00000467272 SLC35G3Q8N808 338 aa8.58□□□□□ -1.04
UBR4-211ENST00000467272 OR1S2Q8NGQ3 325 aa8.58□□□□□ -1.04
UBR4-211ENST00000467272 TMEM230Q96A57 120 aa8.58□□□□□ -1.04
UBR4-211ENST00000467272 NARS2Q96I59 477 aaKnown RBP8.58□□□□□ -1.04
UBR4-211ENST00000467272 SAV1Q9H4B6 383 aaPredicted RBP8.58□□□□□ -1.04
UBR4-211ENST00000467272 RAB26Q9ULW5 256 aa8.58□□□□□ -1.04
UBR4-211ENST00000467272 NBDYA0A0U1RRE5 68 aa8.57□□□□□ -1.04
UBR4-211ENST00000467272 A8MTW9 85 aa8.57□□□□□ -1.04
UBR4-211ENST00000467272 OPRK1P41145 380 aa8.57□□□□□ -1.04
UBR4-211ENST00000467272 HOXA1P49639 335 aaPredicted RBP8.57□□□□□ -1.04
UBR4-211ENST00000467272 EMP1P54849 157 aa8.57□□□□□ -1.04
UBR4-211ENST00000467272 SIGLEC15Q6ZMC9 328 aa8.57□□□□□ -1.04
UBR4-211ENST00000467272 ZNF486Q96H40 463 aaPredicted RBP8.57□□□□□ -1.04
UBR4-211ENST00000467272 YTHDF1Q9BYJ9 559 aaKnown RBP8.57□□□□□ -1.04
UBR4-211ENST00000467272 LOC100506127A0A0U1RQW1 187 aa8.56□□□□□ -1.04
UBR4-211ENST00000467272 S100GP29377 79 aa8.56□□□□□ -1.04
UBR4-211ENST00000467272 OR10J1P30954 320 aa8.56□□□□□ -1.04
UBR4-211ENST00000467272 TGFBR1P36897 503 aa8.56□□□□□ -1.04
UBR4-211ENST00000467272 RPS19P39019 145 aaKnown RBP8.56□□□□□ -1.04
UBR4-211ENST00000467272 ALDH3B2P48448 385 aa8.56□□□□□ -1.04
UBR4-211ENST00000467272 PAX9P55771 341 aa8.56□□□□□ -1.04
UBR4-211ENST00000467272 C2orf83Q53S99 150 aa8.56□□□□□ -1.04
UBR4-211ENST00000467272 FOXI2Q6ZQN5 318 aa8.56□□□□□ -1.04
UBR4-211ENST00000467272 CROCCP3Q8IVE0 287 aa8.56□□□□□ -1.04
UBR4-211ENST00000467272 C6orf223Q8N319 242 aa8.56□□□□□ -1.04
UBR4-211ENST00000467272 SAMD12Q8N8I0 201 aa8.56□□□□□ -1.04
UBR4-211ENST00000467272 OR52E5Q8NH55 327 aa8.56□□□□□ -1.04
UBR4-211ENST00000467272 Q8WTZ3 238 aa8.56□□□□□ -1.04
UBR4-211ENST00000467272 WDR12Q9GZL7 423 aaKnown RBP8.56□□□□□ -1.04
UBR4-211ENST00000467272 SCPEP1Q9HB40 452 aa8.56□□□□□ -1.04
UBR4-211ENST00000467272 YTHDF2Q9Y5A9 579 aaKnown RBP8.56□□□□□ -1.04
UBR4-211ENST00000467272 SCGB2A1O75556 95 aa8.55□□□□□ -1.04
UBR4-211ENST00000467272 TOMM40O96008 361 aa8.55□□□□□ -1.04
UBR4-211ENST00000467272 IL4P05112 153 aa8.55□□□□□ -1.04
UBR4-211ENST00000467272 SLC25A4P12235 298 aa8.55□□□□□ -1.04
UBR4-211ENST00000467272 UCP1P25874 307 aa8.55□□□□□ -1.04
UBR4-211ENST00000467272 HTR2BP41595 481 aa8.55□□□□□ -1.04
UBR4-211ENST00000467272 RND2P52198 227 aa8.55□□□□□ -1.04
UBR4-211ENST00000467272 SPCS3P61009 180 aa8.55□□□□□ -1.04
UBR4-211ENST00000467272 TSPAN5P62079 268 aa8.55□□□□□ -1.04
UBR4-211ENST00000467272 C15orf53Q8NAA6 179 aa8.55□□□□□ -1.04
UBR4-211ENST00000467272 RNASEH2CQ8TDP1 164 aaKnown RBP8.55□□□□□ -1.04
UBR4-211ENST00000467272 C17orf77Q96MU5 243 aa8.55□□□□□ -1.04
UBR4-211ENST00000467272 SCRT2Q9NQ03 307 aa8.55□□□□□ -1.04
UBR4-211ENST00000467272 PI3P19957 117 aa8.54□□□□□ -1.04
UBR4-211ENST00000467272 AMTNQ6UX39 209 aa8.54□□□□□ -1.04
UBR4-211ENST00000467272 SLC35B3Q9H1N7 401 aa8.54□□□□□ -1.04
UBR4-211ENST00000467272 VCX3BQ9H321 246 aa8.54□□□□□ -1.04
UBR4-211ENST00000467272 C3orf85A0A1B0GTC6 90 aa8.53□□□□□ -1.04
UBR4-211ENST00000467272 LOC102723971A0A1B0GUV8 181 aa8.53□□□□□ -1.04
UBR4-211ENST00000467272 RPS10-NUDT3A0A1W2PQS6 291 aa8.53□□□□□ -1.04
UBR4-211ENST00000467272 PLAC8L1A1L4L8 177 aa8.53□□□□□ -1.04
UBR4-211ENST00000467272 CDS2O95674 445 aa8.53□□□□□ -1.04
UBR4-211ENST00000467272 PSG1P11464 419 aa8.53□□□□□ -1.04
UBR4-211ENST00000467272 RCVRNP35243 200 aa8.53□□□□□ -1.04
UBR4-211ENST00000467272 PSMB3P49720 205 aa8.53□□□□□ -1.04
UBR4-211ENST00000467272 PIGPP57054 158 aa8.53□□□□□ -1.04
UBR4-211ENST00000467272 FXYD7P58549 80 aa8.53□□□□□ -1.04
UBR4-211ENST00000467272 SPATA31B1PQ5VZV4 182 aa8.53□□□□□ -1.04
UBR4-211ENST00000467272 KLK11Q9UBX7 282 aa8.53□□□□□ -1.04
UBR4-211ENST00000467272 IGHV3OR16-12A0A075B7B8 117 aa8.52□□□□□ -1.05
UBR4-211ENST00000467272 A0A0J9YX75 114 aa8.52□□□□□ -1.05
UBR4-211ENST00000467272 M0QYG6 137 aa8.52□□□□□ -1.05
UBR4-211ENST00000467272 GSTZ1O43708 216 aaPredicted RBP8.52□□□□□ -1.05
UBR4-211ENST00000467272 ATG12O94817 140 aa8.52□□□□□ -1.05
UBR4-211ENST00000467272 IGKV3-20P01619 116 aa8.52□□□□□ -1.05
UBR4-211ENST00000467272 RD3LP0DJH9 198 aa8.52□□□□□ -1.05
UBR4-211ENST00000467272 HTN3P15516 51 aa8.52□□□□□ -1.05
UBR4-211ENST00000467272 ELK1P19419 428 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms