RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 SPOPLQ6IQ16 392 aa0.12□□□□□ -2.39
SMC4-207ENST00000467263 C8orf74Q6P047 294 aa0.12□□□□□ -2.39
SMC4-207ENST00000467263 TRAPPC6BQ86SZ2 158 aa0.12□□□□□ -2.39
SMC4-207ENST00000467263 LINC00301Q8NCQ3 95 aa0.12□□□□□ -2.39
SMC4-207ENST00000467263 LLPHQ9BRT6 129 aaKnown RBP0.12□□□□□ -2.39
SMC4-207ENST00000467263 HEATR1Q9H583 2144 aaKnown RBP0.12□□□□□ -2.39
SMC4-207ENST00000467263 NHP2Q9NX24 153 aaKnown RBP0.12□□□□□ -2.39
SMC4-207ENST00000467263 ATP6V1DQ9Y5K8 247 aa0.12□□□□□ -2.39
SMC4-207ENST00000467263 CITO14578 2027 aa0.12□□□□□ -2.39
SMC4-207ENST00000467263 HECW2Q9P2P5 1572 aa0.11□□□□□ -2.39
SMC4-207ENST00000467263 CRYZL1O95825 349 aa0.11□□□□□ -2.39
SMC4-207ENST00000467263 CD79AP11912 226 aa0.11□□□□□ -2.39
SMC4-207ENST00000467263 S100A4P26447 101 aaKnown RBP0.11□□□□□ -2.39
SMC4-207ENST00000467263 PSME3P61289 254 aa0.11□□□□□ -2.39
SMC4-207ENST00000467263 ESRGQ1W209 222 aa0.11□□□□□ -2.39
SMC4-207ENST00000467263 BRMS1LQ5PSV4 323 aa0.11□□□□□ -2.39
SMC4-207ENST00000467263 LINC00322Q6ZN03 302 aaPredicted RBP0.11□□□□□ -2.39
SMC4-207ENST00000467263 LCA10Q71F78 164 aa0.11□□□□□ -2.39
SMC4-207ENST00000467263 CFAP53Q96M91 514 aa0.11□□□□□ -2.39
SMC4-207ENST00000467263 TSPAN32Q96QS1 320 aa0.11□□□□□ -2.39
SMC4-207ENST00000467263 OR52E6Q96RD3 313 aa0.11□□□□□ -2.39
SMC4-207ENST00000467263 MRPS26Q9BYN8 205 aaKnown RBP0.11□□□□□ -2.39
SMC4-207ENST00000467263 C6orf62Q9GZU0 229 aaPredicted RBP0.11□□□□□ -2.39
SMC4-207ENST00000467263 SCN10AQ9Y5Y9 1956 aa0.11□□□□□ -2.39
SMC4-207ENST00000467263 WRNQ14191 1432 aaPredicted RBP eCLIP0.11□□□□□ -2.39
SMC4-207ENST00000467263 NUP155O75694 1391 aa0.1□□□□□ -2.39
SMC4-207ENST00000467263 CCL16O15467 120 aa0.1□□□□□ -2.39
SMC4-207ENST00000467263 TPM3P06753 285 aa0.1□□□□□ -2.39
SMC4-207ENST00000467263 KRTAP2-3P0C7H8 128 aa0.1□□□□□ -2.39
SMC4-207ENST00000467263 CIRBPQ14011 172 aaKnown RBP0.1□□□□□ -2.39
SMC4-207ENST00000467263 HIST3H3Q16695 136 aa0.1□□□□□ -2.39
SMC4-207ENST00000467263 LINC01554Q52M75 96 aa0.1□□□□□ -2.39
SMC4-207ENST00000467263 KRTAP2-4Q9BYR9 128 aa0.1□□□□□ -2.39
SMC4-207ENST00000467263 KRTAP2-1Q9BYU5 128 aa0.1□□□□□ -2.39
SMC4-207ENST00000467263 NKIRAS1Q9NYS0 192 aa0.1□□□□□ -2.39
SMC4-207ENST00000467263 TMEM14CQ9P0S9 112 aa0.1□□□□□ -2.39
SMC4-207ENST00000467263 TRBV6-4A0A1B0GX49 114 aa0.09□□□□□ -2.4
SMC4-207ENST00000467263 OR4C46A6NHA9 309 aa0.09□□□□□ -2.4
SMC4-207ENST00000467263 OR4E1P0C645 316 aa0.09□□□□□ -2.4
SMC4-207ENST00000467263 HIST1H1EP10412 219 aaKnown RBP0.09□□□□□ -2.4
SMC4-207ENST00000467263 OR2F1Q13607 317 aa0.09□□□□□ -2.4
SMC4-207ENST00000467263 TEX47Q8TBZ9 253 aa0.09□□□□□ -2.4
SMC4-207ENST00000467263 ITFG2Q969R8 447 aa0.09□□□□□ -2.4
SMC4-207ENST00000467263 DCSTAMPQ9H295 470 aa0.09□□□□□ -2.4
SMC4-207ENST00000467263 UTP11Q9Y3A2 253 aaKnown RBP0.09□□□□□ -2.4
SMC4-207ENST00000467263 MYO3BQ8WXR4 1341 aa0.09□□□□□ -2.4
SMC4-207ENST00000467263 CHD3Q12873 2000 aaKnown RBP0.08□□□□□ -2.4
SMC4-207ENST00000467263 A0A0D9SG42 100 aa0.08□□□□□ -2.4
SMC4-207ENST00000467263 PIRO00625 290 aa0.08□□□□□ -2.4
SMC4-207ENST00000467263 SMIM10L2AP0DMW4 78 aa0.08□□□□□ -2.4
SMC4-207ENST00000467263 SMIM10L2BP0DMW5 78 aa0.08□□□□□ -2.4
SMC4-207ENST00000467263 TPM4P67936 248 aa0.08□□□□□ -2.4
SMC4-207ENST00000467263 ACOT6Q3I5F7 207 aaPredicted RBP0.08□□□□□ -2.4
SMC4-207ENST00000467263 OR11H6Q8NGC7 330 aa0.08□□□□□ -2.4
SMC4-207ENST00000467263 OR8D4Q8NGM9 314 aa0.08□□□□□ -2.4
SMC4-207ENST00000467263 TAS2R7Q9NYW3 318 aa0.08□□□□□ -2.4
SMC4-207ENST00000467263 UBAP1Q9NZ09 502 aa0.08□□□□□ -2.4
SMC4-207ENST00000467263 MRPL27Q9P0M9 148 aaKnown RBP0.08□□□□□ -2.4
SMC4-207ENST00000467263 MYH10P35580 1976 aa0.08□□□□□ -2.4
SMC4-207ENST00000467263 TLCD2A6NGC4 264 aa0.07□□□□□ -2.4
SMC4-207ENST00000467263 YPEL3P61236 119 aaPredicted RBP0.07□□□□□ -2.4
SMC4-207ENST00000467263 CDKL4Q5MAI5 379 aa0.07□□□□□ -2.4
SMC4-207ENST00000467263 KRT222Q8N1A0 295 aa0.07□□□□□ -2.4
SMC4-207ENST00000467263 WFDC5Q8TCV5 224 aa0.07□□□□□ -2.4
SMC4-207ENST00000467263 C20orf27Q9GZN8 174 aa0.07□□□□□ -2.4
SMC4-207ENST00000467263 GUCA1BQ9UMX6 200 aa0.07□□□□□ -2.4
SMC4-207ENST00000467263 MYO18AQ92614 2054 aaKnown RBP0.07□□□□□ -2.4
SMC4-207ENST00000467263 SYNE1Q8NF91 8797 aaKnown RBP0.07□□□□□ -2.4
SMC4-207ENST00000467263 A0A087X0T9 212 aa0.06□□□□□ -2.4
SMC4-207ENST00000467263 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP0.06□□□□□ -2.4
SMC4-207ENST00000467263 TRAV26-2A0A0B4J265 109 aa0.06□□□□□ -2.4
SMC4-207ENST00000467263 C7orf71A4D174 169 aa0.06□□□□□ -2.4
SMC4-207ENST00000467263 C1orf196B1AJZ1 125 aa0.06□□□□□ -2.4
SMC4-207ENST00000467263 SPINK9Q5DT21 86 aa0.06□□□□□ -2.4
SMC4-207ENST00000467263 KRTAP26-1Q6PEX3 210 aa0.06□□□□□ -2.4
SMC4-207ENST00000467263 ST6GALNAC3Q8NDV1 305 aa0.06□□□□□ -2.4
SMC4-207ENST00000467263 PLPP5Q8NEB5 264 aa0.06□□□□□ -2.4
SMC4-207ENST00000467263 BCL2L10Q9HD36 194 aa0.06□□□□□ -2.4
SMC4-207ENST00000467263 C14orf132Q9NPU4 83 aa0.06□□□□□ -2.4
SMC4-207ENST00000467263 PLAC8Q9NZF1 115 aa0.06□□□□□ -2.4
SMC4-207ENST00000467263 CHCHD2Q9Y6H1 151 aaPredicted RBP0.06□□□□□ -2.4
SMC4-207ENST00000467263 KCPQ6ZWJ8 1503 aa0.06□□□□□ -2.4
SMC4-207ENST00000467263 TNCP24821 2201 aa0.06□□□□□ -2.4
SMC4-207ENST00000467263 UNC13CQ8NB66 2214 aa0.06□□□□□ -2.4
SMC4-207ENST00000467263 MED1Q15648 1581 aaPredicted RBP0.06□□□□□ -2.4
SMC4-207ENST00000467263 FAM236DA0A1B0GTK5 79 aa0.05□□□□□ -2.4
SMC4-207ENST00000467263 M0R378 163 aa0.05□□□□□ -2.4
SMC4-207ENST00000467263 CHP2O43745 196 aa0.05□□□□□ -2.4
SMC4-207ENST00000467263 RBP1P09455 135 aa0.05□□□□□ -2.4
SMC4-207ENST00000467263 FAM236CP0DP71 79 aa0.05□□□□□ -2.4
SMC4-207ENST00000467263 CASP1P29466 404 aa0.05□□□□□ -2.4
SMC4-207ENST00000467263 SULT1A1P50225 295 aa0.05□□□□□ -2.4
SMC4-207ENST00000467263 TSNQ15631 228 aaKnown RBP0.05□□□□□ -2.4
SMC4-207ENST00000467263 ADAT3Q96EY9 351 aaPredicted RBP0.05□□□□□ -2.4
SMC4-207ENST00000467263 DCUN1D1Q96GG9 259 aa0.05□□□□□ -2.4
SMC4-207ENST00000467263 HIST1H2BLQ99880 126 aa0.05□□□□□ -2.4
SMC4-207ENST00000467263 CCDC90BQ9GZT6 254 aa0.05□□□□□ -2.4
SMC4-207ENST00000467263 C14orf105Q9NVL8 296 aa0.05□□□□□ -2.4
SMC4-207ENST00000467263 CYSLTR1Q9Y271 337 aa0.05□□□□□ -2.4
SMC4-207ENST00000467263 ROBO3Q96MS0 1386 aa0.05□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms