RNA–Protein interactions for RNA: ENST00000467114.2

PRPF40A-205, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-205ENST00000467114 CTSDP07339 412 aaPredicted RBP1.51□□□□□ -2.17
PRPF40A-205ENST00000467114 COX6A1P12074 109 aa1.51□□□□□ -2.17
PRPF40A-205ENST00000467114 SPI1P17947 270 aa1.51□□□□□ -2.17
PRPF40A-205ENST00000467114 SRP14P37108 136 aaKnown RBP1.51□□□□□ -2.17
PRPF40A-205ENST00000467114 AKR1C3P42330 323 aa1.51□□□□□ -2.17
PRPF40A-205ENST00000467114 TAS2R41P59536 307 aa1.51□□□□□ -2.17
PRPF40A-205ENST00000467114 GNG5P63218 68 aa1.51□□□□□ -2.17
PRPF40A-205ENST00000467114 EIF5AP63241 154 aaKnown RBP1.51□□□□□ -2.17
PRPF40A-205ENST00000467114 ELOBQ15370 118 aa1.51□□□□□ -2.17
PRPF40A-205ENST00000467114 Q1T7F1 81 aa1.51□□□□□ -2.17
PRPF40A-205ENST00000467114 Q6ZRN7 208 aaPredicted RBP1.51□□□□□ -2.17
PRPF40A-205ENST00000467114 C10orf126Q8N4M7 172 aa1.51□□□□□ -2.17
PRPF40A-205ENST00000467114 SERPINI1Q99574 410 aa1.51□□□□□ -2.17
PRPF40A-205ENST00000467114 HIST1H2BLQ99880 126 aa1.51□□□□□ -2.17
PRPF40A-205ENST00000467114 HOPXQ9BPY8 73 aaPredicted RBP1.51□□□□□ -2.17
PRPF40A-205ENST00000467114 ZNF106Q9H2Y7 1883 aaKnown RBP1.51□□□□□ -2.17
PRPF40A-205ENST00000467114 SORL1Q92673 2214 aa1.51□□□□□ -2.17
PRPF40A-205ENST00000467114 DISP1Q96F81 1524 aa1.5□□□□□ -2.17
PRPF40A-205ENST00000467114 FMN1Q68DA7 1419 aa1.5□□□□□ -2.17
PRPF40A-205ENST00000467114 MIA2Q96PC5 1412 aa1.5□□□□□ -2.17
PRPF40A-205ENST00000467114 GBF1Q92538 1859 aa1.5□□□□□ -2.17
PRPF40A-205ENST00000467114 TONSLQ96HA7 1378 aa1.5□□□□□ -2.17
PRPF40A-205ENST00000467114 STRCP1A6NGW2 1772 aa1.5□□□□□ -2.17
PRPF40A-205ENST00000467114 DOCK10Q96BY6 2186 aa1.5□□□□□ -2.17
PRPF40A-205ENST00000467114 IGKV1D-42A0A075B6H8 117 aa1.5□□□□□ -2.17
PRPF40A-205ENST00000467114 AIPO00170 330 aa1.5□□□□□ -2.17
PRPF40A-205ENST00000467114 CST8O60676 142 aa1.5□□□□□ -2.17
PRPF40A-205ENST00000467114 GPX2P18283 190 aa1.5□□□□□ -2.17
PRPF40A-205ENST00000467114 FKBP2P26885 142 aaKnown RBP1.5□□□□□ -2.17
PRPF40A-205ENST00000467114 PHBP35232 272 aa1.5□□□□□ -2.17
PRPF40A-205ENST00000467114 GNG3P63215 75 aa1.5□□□□□ -2.17
PRPF40A-205ENST00000467114 RRN3P1Q2M238 152 aa1.5□□□□□ -2.17
PRPF40A-205ENST00000467114 SMIM20Q8N5G0 67 aa1.5□□□□□ -2.17
PRPF40A-205ENST00000467114 OR4D11Q8NGI4 311 aa1.5□□□□□ -2.17
PRPF40A-205ENST00000467114 OR13D1Q8NGV5 346 aa1.5□□□□□ -2.17
PRPF40A-205ENST00000467114 STAG3L4Q8TBR4 150 aa1.5□□□□□ -2.17
PRPF40A-205ENST00000467114 MBD3L1Q8WWY6 194 aa1.5□□□□□ -2.17
PRPF40A-205ENST00000467114 ADAT3Q96EY9 351 aaPredicted RBP1.5□□□□□ -2.17
PRPF40A-205ENST00000467114 ZNF625Q96I27 306 aaPredicted RBP1.5□□□□□ -2.17
PRPF40A-205ENST00000467114 Q96M85 177 aa1.5□□□□□ -2.17
PRPF40A-205ENST00000467114 GINS3Q9BRX5 216 aa1.5□□□□□ -2.17
PRPF40A-205ENST00000467114 TMEM133Q9H2Q1 129 aa1.5□□□□□ -2.17
PRPF40A-205ENST00000467114 MIXL1Q9H2W2 232 aa1.5□□□□□ -2.17
PRPF40A-205ENST00000467114 SS18L2Q9UHA2 77 aa1.5□□□□□ -2.17
PRPF40A-205ENST00000467114 EPDR1Q9UM22 224 aa1.5□□□□□ -2.17
PRPF40A-205ENST00000467114 UFC1Q9Y3C8 167 aa1.5□□□□□ -2.17
PRPF40A-205ENST00000467114 PLXND1Q9Y4D7 1925 aa1.5□□□□□ -2.17
PRPF40A-205ENST00000467114 RIC1Q4ADV7 1423 aa1.49□□□□□ -2.17
PRPF40A-205ENST00000467114 FN1P02751 2386 aaKnown RBP1.49□□□□□ -2.17
PRPF40A-205ENST00000467114 TRGV2A0A075B6R0 118 aa1.49□□□□□ -2.17
PRPF40A-205ENST00000467114 IGKV1-9A0A0C4DH69 117 aa1.49□□□□□ -2.17
PRPF40A-205ENST00000467114 C7orf71A4D174 169 aa1.49□□□□□ -2.17
PRPF40A-205ENST00000467114 H7C1C5 153 aa1.49□□□□□ -2.17
PRPF40A-205ENST00000467114 RPSAP08865 295 aaKnown RBP1.49□□□□□ -2.17
PRPF40A-205ENST00000467114 LCN6P62502 163 aa1.49□□□□□ -2.17
PRPF40A-205ENST00000467114 ZNF846Q147U1 533 aa1.49□□□□□ -2.17
PRPF40A-205ENST00000467114 TRIQKQ629K1 86 aa1.49□□□□□ -2.17
PRPF40A-205ENST00000467114 ZNF826PQ6ZT77 177 aa1.49□□□□□ -2.17
PRPF40A-205ENST00000467114 FP248Q71RG6 208 aaPredicted RBP1.49□□□□□ -2.17
PRPF40A-205ENST00000467114 EXOC3-AS1Q8N2X6 119 aa1.49□□□□□ -2.17
PRPF40A-205ENST00000467114 AQP3Q92482 292 aa1.49□□□□□ -2.17
PRPF40A-205ENST00000467114 SLAMF6Q96DU3 332 aa1.49□□□□□ -2.17
PRPF40A-205ENST00000467114 SH3BGRL3Q9H299 93 aa1.49□□□□□ -2.17
PRPF40A-205ENST00000467114 LYRM2Q9NU23 88 aaPredicted RBP1.49□□□□□ -2.17
PRPF40A-205ENST00000467114 SSR3Q9UNL2 185 aa1.49□□□□□ -2.17
PRPF40A-205ENST00000467114 ZFHX2Q9C0A1 2572 aaPredicted RBP1.49□□□□□ -2.17
PRPF40A-205ENST00000467114 TMEM212A6NML5 194 aa1.48□□□□□ -2.17
PRPF40A-205ENST00000467114 F8W036 122 aa1.48□□□□□ -2.17
PRPF40A-205ENST00000467114 TAX1BP3O14907 124 aa1.48□□□□□ -2.17
PRPF40A-205ENST00000467114 BANF1O75531 89 aa1.48□□□□□ -2.17
PRPF40A-205ENST00000467114 FABP1P07148 127 aa1.48□□□□□ -2.17
PRPF40A-205ENST00000467114 ZNF705BP0CI00 300 aaPredicted RBP1.48□□□□□ -2.17
PRPF40A-205ENST00000467114 CRYBA4P53673 196 aa1.48□□□□□ -2.17
PRPF40A-205ENST00000467114 TCTAP57738 103 aa1.48□□□□□ -2.17
PRPF40A-205ENST00000467114 TSNQ15631 228 aaKnown RBP1.48□□□□□ -2.17
PRPF40A-205ENST00000467114 SCGB2B2Q4G0G5 96 aa1.48□□□□□ -2.17
PRPF40A-205ENST00000467114 SELENOSQ9BQE4 189 aa1.48□□□□□ -2.17
PRPF40A-205ENST00000467114 SLC50A1Q9BRV3 221 aa1.48□□□□□ -2.17
PRPF40A-205ENST00000467114 PBDC1Q9BVG4 233 aa1.48□□□□□ -2.17
PRPF40A-205ENST00000467114 BOLA2Q9H3K6 86 aa1.48□□□□□ -2.17
PRPF40A-205ENST00000467114 NHP2Q9NX24 153 aaKnown RBP1.48□□□□□ -2.17
PRPF40A-205ENST00000467114 TAS2R4Q9NYW5 299 aa1.48□□□□□ -2.17
PRPF40A-205ENST00000467114 V9GYQ6 96 aa1.48□□□□□ -2.17
PRPF40A-205ENST00000467114 TENM1Q9UKZ4 2725 aa1.48□□□□□ -2.17
PRPF40A-205ENST00000467114 RGS12O14924 1447 aa1.48□□□□□ -2.17
PRPF40A-205ENST00000467114 SMARCA4P51532 1647 aa1.48□□□□□ -2.17
PRPF40A-205ENST00000467114 KIF1BO60333 1816 aa1.47□□□□□ -2.17
PRPF40A-205ENST00000467114 ECM29Q5VYK3 1845 aa1.47□□□□□ -2.17
PRPF40A-205ENST00000467114 RTTNQ86VV8 2226 aa1.47□□□□□ -2.17
PRPF40A-205ENST00000467114 DUXBA0A1W2PPF3 345 aa1.47□□□□□ -2.17
PRPF40A-205ENST00000467114 FUOMA2VDF0 154 aa1.47□□□□□ -2.17
PRPF40A-205ENST00000467114 MFSD11O43934 449 aa1.47□□□□□ -2.17
PRPF40A-205ENST00000467114 RNASE4P34096 147 aaKnown RBP1.47□□□□□ -2.17
PRPF40A-205ENST00000467114 SNCBQ16143 134 aa1.47□□□□□ -2.17
PRPF40A-205ENST00000467114 SPANXN5Q5MJ07 72 aa1.47□□□□□ -2.17
PRPF40A-205ENST00000467114 BCL2L15Q5TBC7 163 aa1.47□□□□□ -2.17
PRPF40A-205ENST00000467114 C3orf33Q6P1S2 294 aa1.47□□□□□ -2.17
PRPF40A-205ENST00000467114 RPS19BP1Q86WX3 136 aaKnown RBP1.47□□□□□ -2.17
PRPF40A-205ENST00000467114 STX19Q8N4C7 294 aa1.47□□□□□ -2.17
PRPF40A-205ENST00000467114 YPEL2Q96QA6 119 aa1.47□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms