RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-208ENST00000466579 IAH1Q2TAA2 248 aaPredicted RBP7.12□□□□□ -1.27
SDCCAG3-208ENST00000466579 DEFB121Q5J5C9 76 aa7.12□□□□□ -1.27
SDCCAG3-208ENST00000466579 SLC16A13Q7RTY0 426 aa7.12□□□□□ -1.27
SDCCAG3-208ENST00000466579 TMEM61Q8N0U2 210 aa7.12□□□□□ -1.27
SDCCAG3-208ENST00000466579 C12orf45Q8N5I9 185 aaPredicted RBP7.12□□□□□ -1.27
SDCCAG3-208ENST00000466579 ENKURQ8TC29 256 aa7.12□□□□□ -1.27
SDCCAG3-208ENST00000466579 SMIM8Q96KF7 97 aa7.12□□□□□ -1.27
SDCCAG3-208ENST00000466579 MARVELD1Q9BSK0 173 aa7.12□□□□□ -1.27
SDCCAG3-208ENST00000466579 MAGT1Q9H0U3 335 aa7.12□□□□□ -1.27
SDCCAG3-208ENST00000466579 VSIRQ9H7M9 311 aa7.12□□□□□ -1.27
SDCCAG3-208ENST00000466579 C19orf73Q9NVV2 129 aa7.12□□□□□ -1.27
SDCCAG3-208ENST00000466579 PUS1Q9Y606 427 aaKnown RBP eCLIP7.12□□□□□ -1.27
SDCCAG3-208ENST00000466579 HUWE1Q7Z6Z7 4374 aaKnown RBP7.12□□□□□ -1.27
SDCCAG3-208ENST00000466579 TRAV14DV4A0A0A6YYC5 116 aa7.11□□□□□ -1.27
SDCCAG3-208ENST00000466579 SNRPGP15A8MWD9 76 aa7.11□□□□□ -1.27
SDCCAG3-208ENST00000466579 CHEK1O14757 476 aa7.11□□□□□ -1.27
SDCCAG3-208ENST00000466579 TSPAN4O14817 238 aa7.11□□□□□ -1.27
SDCCAG3-208ENST00000466579 PRAF2O60831 178 aa7.11□□□□□ -1.27
SDCCAG3-208ENST00000466579 IFNA4P05014 189 aa7.11□□□□□ -1.27
SDCCAG3-208ENST00000466579 IAPPP10997 89 aa7.11□□□□□ -1.27
SDCCAG3-208ENST00000466579 OR10J1P30954 320 aa7.11□□□□□ -1.27
SDCCAG3-208ENST00000466579 PAX9P55771 341 aa7.11□□□□□ -1.27
SDCCAG3-208ENST00000466579 TAS2R30P59541 319 aa7.11□□□□□ -1.27
SDCCAG3-208ENST00000466579 DEFA1P59665 94 aa7.11□□□□□ -1.27
SDCCAG3-208ENST00000466579 DEFA3P59666 94 aa7.11□□□□□ -1.27
SDCCAG3-208ENST00000466579 POLR2GP62487 172 aaKnown RBP eCLIP7.11□□□□□ -1.27
SDCCAG3-208ENST00000466579 RAB11AP62491 216 aa7.11□□□□□ -1.27
SDCCAG3-208ENST00000466579 IL15RAQ13261 267 aa7.11□□□□□ -1.27
SDCCAG3-208ENST00000466579 GAMTQ14353 236 aa7.11□□□□□ -1.27
SDCCAG3-208ENST00000466579 TIGITQ495A1 244 aa7.11□□□□□ -1.27
SDCCAG3-208ENST00000466579 FAM90A2PQ658T7 463 aa7.11□□□□□ -1.27
SDCCAG3-208ENST00000466579 BTNL8Q6UX41 500 aa7.11□□□□□ -1.27
SDCCAG3-208ENST00000466579 NPIPB3Q92617 1050 aa7.11□□□□□ -1.27
SDCCAG3-208ENST00000466579 WDR89Q96FK6 387 aaPredicted RBP7.11□□□□□ -1.27
SDCCAG3-208ENST00000466579 RAB40CQ96S21 281 aa7.11□□□□□ -1.27
SDCCAG3-208ENST00000466579 SPAG8Q99932 426 aaPredicted RBP7.11□□□□□ -1.27
SDCCAG3-208ENST00000466579 GINS3Q9BRX5 216 aa7.11□□□□□ -1.27
SDCCAG3-208ENST00000466579 C20orf24Q9BUV8 137 aa7.11□□□□□ -1.27
SDCCAG3-208ENST00000466579 RCL1Q9Y2P8 373 aaKnown RBP7.11□□□□□ -1.27
SDCCAG3-208ENST00000466579 U3KQE9 123 aa7.11□□□□□ -1.27
SDCCAG3-208ENST00000466579 IGKV1D-37A0A075B6S9 117 aa7.1□□□□□ -1.27
SDCCAG3-208ENST00000466579 IGHV3OR16-8A0A075B7F1 116 aa7.1□□□□□ -1.27
SDCCAG3-208ENST00000466579 PMS2P5A8MQ11 134 aa7.1□□□□□ -1.27
SDCCAG3-208ENST00000466579 WRBO00258 174 aa7.1□□□□□ -1.27
SDCCAG3-208ENST00000466579 ZNF207O43670 478 aaKnown RBP7.1□□□□□ -1.27
SDCCAG3-208ENST00000466579 TSC22D2O75157 780 aa7.1□□□□□ -1.27
SDCCAG3-208ENST00000466579 YIF1AO95070 293 aa7.1□□□□□ -1.27
SDCCAG3-208ENST00000466579 TOMM40O96008 361 aa7.1□□□□□ -1.27
SDCCAG3-208ENST00000466579 MBPP02686 304 aaPredicted RBP7.1□□□□□ -1.27
SDCCAG3-208ENST00000466579 NHLRC4P0CG21 123 aaPredicted RBP7.1□□□□□ -1.27
SDCCAG3-208ENST00000466579 IGHV4-30-4P0DP06 118 aa7.1□□□□□ -1.27
SDCCAG3-208ENST00000466579 CRYBB3P26998 211 aa7.1□□□□□ -1.27
SDCCAG3-208ENST00000466579 TMEM14EPQ6UXP3 125 aa7.1□□□□□ -1.27
SDCCAG3-208ENST00000466579 LINC00322Q6ZN03 302 aaPredicted RBP7.1□□□□□ -1.27
SDCCAG3-208ENST00000466579 GTSCR1Q86UQ5 136 aa7.1□□□□□ -1.27
SDCCAG3-208ENST00000466579 THAP8Q8NA92 274 aa7.1□□□□□ -1.27
SDCCAG3-208ENST00000466579 FAM110AQ9BQ89 295 aa7.1□□□□□ -1.27
SDCCAG3-208ENST00000466579 RHPN1-AS1Q9BWJ2 59 aa7.1□□□□□ -1.27
SDCCAG3-208ENST00000466579 C11orf1Q9H5F2 150 aa7.1□□□□□ -1.27
SDCCAG3-208ENST00000466579 STRAPQ9Y3F4 350 aaKnown RBP7.1□□□□□ -1.27
SDCCAG3-208ENST00000466579 IGKV1OR2-108A0A075B7D4 117 aa7.09□□□□□ -1.27
SDCCAG3-208ENST00000466579 INMT-MINDY4F8WBC2 141 aa7.09□□□□□ -1.27
SDCCAG3-208ENST00000466579 CCSO14618 274 aa7.09□□□□□ -1.27
SDCCAG3-208ENST00000466579 SSSCA1O60232 199 aa7.09□□□□□ -1.27
SDCCAG3-208ENST00000466579 CD5P06127 495 aa7.09□□□□□ -1.27
SDCCAG3-208ENST00000466579 FRMD6-AS1P0C7T7 363 aa7.09□□□□□ -1.27
SDCCAG3-208ENST00000466579 SPANXN5Q5MJ07 72 aa7.09□□□□□ -1.27
SDCCAG3-208ENST00000466579 LCE2AQ5TA79 106 aaPredicted RBP7.09□□□□□ -1.27
SDCCAG3-208ENST00000466579 LAMTOR1Q6IAA8 161 aa7.09□□□□□ -1.27
SDCCAG3-208ENST00000466579 ACY3Q96HD9 319 aa7.09□□□□□ -1.27
SDCCAG3-208ENST00000466579 SLC35E1Q96K37 410 aa7.09□□□□□ -1.27
SDCCAG3-208ENST00000466579 C2orf50Q96LR7 162 aa7.09□□□□□ -1.27
SDCCAG3-208ENST00000466579 RNF2Q99496 336 aa7.09□□□□□ -1.27
SDCCAG3-208ENST00000466579 TRGV9Q99603 122 aa7.09□□□□□ -1.27
SDCCAG3-208ENST00000466579 NEURL2Q9BR09 285 aa7.09□□□□□ -1.27
SDCCAG3-208ENST00000466579 GPN1Q9HCN4 374 aaPredicted RBP7.09□□□□□ -1.27
SDCCAG3-208ENST00000466579 PSENENQ9NZ42 101 aa7.09□□□□□ -1.27
SDCCAG3-208ENST00000466579 C7orf66A4D0T2 115 aa7.08□□□□□ -1.28
SDCCAG3-208ENST00000466579 FNDC10F2Z333 226 aa7.08□□□□□ -1.28
SDCCAG3-208ENST00000466579 H3BP45 60 aa7.08□□□□□ -1.28
SDCCAG3-208ENST00000466579 APOHP02749 345 aaPredicted RBP7.08□□□□□ -1.28
SDCCAG3-208ENST00000466579 CD7P09564 240 aa7.08□□□□□ -1.28
SDCCAG3-208ENST00000466579 PSG1P11464 419 aa7.08□□□□□ -1.28
SDCCAG3-208ENST00000466579 NPPCP23582 126 aa7.08□□□□□ -1.28
SDCCAG3-208ENST00000466579 BMI1P35226 326 aa7.08□□□□□ -1.28
SDCCAG3-208ENST00000466579 CD81P60033 236 aa7.08□□□□□ -1.28
SDCCAG3-208ENST00000466579 GUCA2BQ16661 112 aa7.08□□□□□ -1.28
SDCCAG3-208ENST00000466579 RBPMS2Q6ZRY4 209 aaKnown RBP7.08□□□□□ -1.28
SDCCAG3-208ENST00000466579 LILRB2Q8N423 598 aa7.08□□□□□ -1.28
SDCCAG3-208ENST00000466579 Q8WTZ3 238 aa7.08□□□□□ -1.28
SDCCAG3-208ENST00000466579 ST8SIA2Q92186 375 aa7.08□□□□□ -1.28
SDCCAG3-208ENST00000466579 METTL26Q96S19 204 aa7.08□□□□□ -1.28
SDCCAG3-208ENST00000466579 GSKIPQ9P0R6 139 aa7.08□□□□□ -1.28
SDCCAG3-208ENST00000466579 TRAV2A0A0B4J234 112 aa7.07□□□□□ -1.28
SDCCAG3-208ENST00000466579 A0A1W2PS18 150 aa7.07□□□□□ -1.28
SDCCAG3-208ENST00000466579 C5orf51A6NDU8 294 aa7.07□□□□□ -1.28
SDCCAG3-208ENST00000466579 K7EPK0 472 aa7.07□□□□□ -1.28
SDCCAG3-208ENST00000466579 PTTG1O95997 202 aa7.07□□□□□ -1.28
SDCCAG3-208ENST00000466579 RD3LP0DJH9 198 aa7.07□□□□□ -1.28
SDCCAG3-208ENST00000466579 USF2Q15853 346 aaPredicted RBP7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms