RNA–Protein interactions for RNA: ENST00000466154.5

SLX4-202, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 1 (best)

Gene SLX4, Length 3,228 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-202ENST00000466154 CMTM2Q8TAZ6 248 aa13.19□□□□□ -0.3
SLX4-202ENST00000466154 PAXXQ9BUH6 204 aa13.19□□□□□ -0.3
SLX4-202ENST00000466154 ONECUT1Q9UBC0 465 aa13.19□□□□□ -0.3
SLX4-202ENST00000466154 INSIG2Q9Y5U4 225 aa13.19□□□□□ -0.3
SLX4-202ENST00000466154 CACNA1BQ00975 2339 aa13.19□□□□□ -0.3
SLX4-202ENST00000466154 CGB1A6NKQ9 187 aa13.19□□□□□ -0.3
SLX4-202ENST00000466154 LINC00305Q7Z4B0 112 aa13.19□□□□□ -0.3
SLX4-202ENST00000466154 PDPNQ86YL7 162 aa13.19□□□□□ -0.3
SLX4-202ENST00000466154 SAMD10Q9BYL1 202 aa13.19□□□□□ -0.3
SLX4-202ENST00000466154 CHD8Q9HCK8 2581 aa13.19□□□□□ -0.3
SLX4-202ENST00000466154 GBGT1Q8N5D6 347 aa13.18□□□□□ -0.3
SLX4-202ENST00000466154 BTF3L4Q96K17 158 aa13.18□□□□□ -0.3
SLX4-202ENST00000466154 SLC25A2Q9BXI2 301 aa13.18□□□□□ -0.3
SLX4-202ENST00000466154 NCOR2Q9Y618 2525 aa13.18□□□□□ -0.3
SLX4-202ENST00000466154 COL12A1Q99715 3063 aa13.18□□□□□ -0.3
SLX4-202ENST00000466154 PPOXP50336 477 aa13.18□□□□□ -0.3
SLX4-202ENST00000466154 IBA57Q5T440 356 aaKnown RBP13.18□□□□□ -0.3
SLX4-202ENST00000466154 ST6GALNAC3Q8NDV1 305 aa13.18□□□□□ -0.3
SLX4-202ENST00000466154 TMEM167AQ8TBQ9 72 aa13.18□□□□□ -0.3
SLX4-202ENST00000466154 TMEM133Q9H2Q1 129 aa13.18□□□□□ -0.3
SLX4-202ENST00000466154 FBXL15Q9H469 300 aa13.17□□□□□ -0.3
SLX4-202ENST00000466154 V9GYV3 84 aa13.17□□□□□ -0.3
SLX4-202ENST00000466154 APOBEC3AP31941 199 aaPredicted RBP13.17□□□□□ -0.3
SLX4-202ENST00000466154 MUC15Q8N387 334 aa13.17□□□□□ -0.3
SLX4-202ENST00000466154 TNFRSF19Q9NS68 423 aa13.17□□□□□ -0.3
SLX4-202ENST00000466154 AMMECR1Q9Y4X0 333 aaPredicted RBP13.17□□□□□ -0.3
SLX4-202ENST00000466154 SERF1AO75920 110 aa13.17□□□□□ -0.3
SLX4-202ENST00000466154 IGLV2-23P01705 113 aa13.17□□□□□ -0.3
SLX4-202ENST00000466154 TMEM30BQ3MIR4 351 aa13.17□□□□□ -0.3
SLX4-202ENST00000466154 TMEM155Q4W5P6 130 aa13.17□□□□□ -0.3
SLX4-202ENST00000466154 S4R3C0 116 aa13.17□□□□□ -0.3
SLX4-202ENST00000466154 PATE2Q6UY27 113 aa13.16□□□□□ -0.3
SLX4-202ENST00000466154 FAM168AQ92567 244 aa13.16□□□□□ -0.3
SLX4-202ENST00000466154 C11orf52Q96A22 123 aa13.16□□□□□ -0.3
SLX4-202ENST00000466154 HILPDAQ9Y5L2 63 aa13.16□□□□□ -0.3
SLX4-202ENST00000466154 IGHV2-26A0A0B4J1V2 119 aa13.16□□□□□ -0.3
SLX4-202ENST00000466154 RPL27AP46776 148 aaKnown RBP13.16□□□□□ -0.3
SLX4-202ENST00000466154 BPIFB3P59826 476 aa13.16□□□□□ -0.3
SLX4-202ENST00000466154 CACNG8Q8WXS5 425 aa13.16□□□□□ -0.3
SLX4-202ENST00000466154 RPEQ96AT9 228 aa13.16□□□□□ -0.3
SLX4-202ENST00000466154 C9JCJ5 164 aa13.15□□□□□ -0.3
SLX4-202ENST00000466154 CCL21O00585 134 aa13.15□□□□□ -0.3
SLX4-202ENST00000466154 CNIH1O95406 144 aa13.15□□□□□ -0.3
SLX4-202ENST00000466154 COA6Q5JTJ3 125 aaKnown RBP13.15□□□□□ -0.3
SLX4-202ENST00000466154 TOMM20LQ6UXN7 152 aa13.15□□□□□ -0.3
SLX4-202ENST00000466154 PNKDQ8N490 385 aa13.15□□□□□ -0.3
SLX4-202ENST00000466154 KIR3DL3Q8N743 410 aa13.15□□□□□ -0.3
SLX4-202ENST00000466154 OR5R1Q8NH85 324 aa13.15□□□□□ -0.3
SLX4-202ENST00000466154 PPIAL4CA0A0B4J2A2 164 aa13.15□□□□□ -0.31
SLX4-202ENST00000466154 TCRBV4S1A1TA0A5B7 111 aa13.15□□□□□ -0.31
SLX4-202ENST00000466154 SLC25A5P05141 298 aaKnown RBP13.15□□□□□ -0.31
SLX4-202ENST00000466154 PPIAL4GP0DN37 164 aa13.15□□□□□ -0.31
SLX4-202ENST00000466154 ST6GALNAC6Q969X2 333 aa13.15□□□□□ -0.31
SLX4-202ENST00000466154 FAM167A-AS1Q96KT0 104 aa13.15□□□□□ -0.31
SLX4-202ENST00000466154 NBL1P41271 181 aa13.14□□□□□ -0.31
SLX4-202ENST00000466154 ARF6P62330 175 aa13.14□□□□□ -0.31
SLX4-202ENST00000466154 HSPB9Q9BQS6 159 aa13.14□□□□□ -0.31
SLX4-202ENST00000466154 FNDC10F2Z333 226 aa13.14□□□□□ -0.31
SLX4-202ENST00000466154 PMCHP20382 165 aa13.14□□□□□ -0.31
SLX4-202ENST00000466154 PDLIM4P50479 330 aa13.14□□□□□ -0.31
SLX4-202ENST00000466154 LYZP61626 148 aa13.14□□□□□ -0.31
SLX4-202ENST00000466154 IQCJQ1A5X6 159 aa13.14□□□□□ -0.31
SLX4-202ENST00000466154 TMEM68Q96MH6 324 aa13.14□□□□□ -0.31
SLX4-202ENST00000466154 PGPA6NDG6 321 aa13.13□□□□□ -0.31
SLX4-202ENST00000466154 ISLRO14498 428 aa13.13□□□□□ -0.31
SLX4-202ENST00000466154 GCGP01275 180 aa13.13□□□□□ -0.31
SLX4-202ENST00000466154 RBP4P02753 201 aa13.13□□□□□ -0.31
SLX4-202ENST00000466154 MC5RP33032 325 aa13.13□□□□□ -0.31
SLX4-202ENST00000466154 UBE2G1P62253 170 aa13.13□□□□□ -0.31
SLX4-202ENST00000466154 OR1L4Q8NGR5 311 aa13.13□□□□□ -0.31
SLX4-202ENST00000466154 RNASEH2CQ8TDP1 164 aaKnown RBP13.13□□□□□ -0.31
SLX4-202ENST00000466154 C22orf15Q8WYQ4 148 aa13.13□□□□□ -0.31
SLX4-202ENST00000466154 JKAMPQ9P055 326 aa13.13□□□□□ -0.31
SLX4-202ENST00000466154 C22orf46C9J442 243 aa13.13□□□□□ -0.31
SLX4-202ENST00000466154 CAMPP49913 170 aa13.13□□□□□ -0.31
SLX4-202ENST00000466154 MFAP2P55001 183 aa13.13□□□□□ -0.31
SLX4-202ENST00000466154 TAS2R60P59551 318 aa13.13□□□□□ -0.31
SLX4-202ENST00000466154 HES1Q14469 280 aa13.13□□□□□ -0.31
SLX4-202ENST00000466154 IGKV1D-37A0A075B6S9 117 aa13.13□□□□□ -0.31
SLX4-202ENST00000466154 A0A1W2PRE2 83 aa13.13□□□□□ -0.31
SLX4-202ENST00000466154 PRRX1P54821 245 aa13.13□□□□□ -0.31
SLX4-202ENST00000466154 C11orf42Q8N5U0 333 aa13.13□□□□□ -0.31
SLX4-202ENST00000466154 TBX15Q96SF7 602 aa13.13□□□□□ -0.31
SLX4-202ENST00000466154 ZNF835Q9Y2P0 537 aa13.13□□□□□ -0.31
SLX4-202ENST00000466154 B9A039 149 aa13.12□□□□□ -0.31
SLX4-202ENST00000466154 IGHV1-3A0A0C4DH29 117 aa13.12□□□□□ -0.31
SLX4-202ENST00000466154 K7ENP7 123 aa13.12□□□□□ -0.31
SLX4-202ENST00000466154 DLX6P56179 175 aa13.12□□□□□ -0.31
SLX4-202ENST00000466154 KRTDAPP60985 99 aa13.12□□□□□ -0.31
SLX4-202ENST00000466154 VN1R17PQ8TDU5 208 aa13.12□□□□□ -0.31
SLX4-202ENST00000466154 ASCL2Q99929 193 aa13.12□□□□□ -0.31
SLX4-202ENST00000466154 MRPL32Q9BYC8 188 aaKnown RBP13.12□□□□□ -0.31
SLX4-202ENST00000466154 CBLN4Q9NTU7 201 aa13.12□□□□□ -0.31
SLX4-202ENST00000466154 PEX7O00628 323 aa13.11□□□□□ -0.31
SLX4-202ENST00000466154 NTF3P20783 257 aa13.11□□□□□ -0.31
SLX4-202ENST00000466154 YPEL3P61236 119 aaPredicted RBP13.11□□□□□ -0.31
SLX4-202ENST00000466154 CDSNQ15517 529 aa13.11□□□□□ -0.31
SLX4-202ENST00000466154 C19orf24Q9BVV8 132 aa13.11□□□□□ -0.31
SLX4-202ENST00000466154 CLEC7AQ9BXN2 247 aa13.11□□□□□ -0.31
SLX4-202ENST00000466154 NAGKQ9UJ70 344 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms