RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 PRSS22Q9GZN4 317 aa15.99■□□□□ 0.15
SDF4-205ENST00000465727 ZNF430Q9H8G1 570 aaPredicted RBP15.99■□□□□ 0.15
SDF4-205ENST00000465727 ZNF492Q9P255 531 aa15.99■□□□□ 0.15
SDF4-205ENST00000465727 EPDR1Q9UM22 224 aa15.99■□□□□ 0.15
SDF4-205ENST00000465727 TANC2Q9HCD6 1990 aa15.99■□□□□ 0.15
SDF4-205ENST00000465727 IGHV3OR15-7A0A075B7D8 119 aa15.99■□□□□ 0.15
SDF4-205ENST00000465727 FAM231BA6NCW3 169 aa15.99■□□□□ 0.15
SDF4-205ENST00000465727 K7ERU9 68 aa15.99■□□□□ 0.15
SDF4-205ENST00000465727 CORTO00230 105 aa15.99■□□□□ 0.15
SDF4-205ENST00000465727 SP9P0CG40 484 aa15.99■□□□□ 0.15
SDF4-205ENST00000465727 FAM71F2Q6NXP2 309 aa15.99■□□□□ 0.15
SDF4-205ENST00000465727 MLST8Q9BVC4 326 aa15.99■□□□□ 0.15
SDF4-205ENST00000465727 PDPNQ86YL7 162 aa15.98■□□□□ 0.15
SDF4-205ENST00000465727 PMCHL2Q9BQD1 86 aa15.98■□□□□ 0.15
SDF4-205ENST00000465727 NDUFA4L2Q9NRX3 87 aa15.98■□□□□ 0.15
SDF4-205ENST00000465727 PEF1Q9UBV8 284 aaKnown RBP15.98■□□□□ 0.15
SDF4-205ENST00000465727 HSPB8Q9UJY1 196 aa15.98■□□□□ 0.15
SDF4-205ENST00000465727 TNCP24821 2201 aa15.98■□□□□ 0.15
SDF4-205ENST00000465727 TCRBV4S1A1TA0A5B7 111 aa15.98■□□□□ 0.15
SDF4-205ENST00000465727 SH2D7A6NKC9 451 aaPredicted RBP15.98■□□□□ 0.15
SDF4-205ENST00000465727 SRRM4A7MD48 611 aaKnown RBP15.98■□□□□ 0.15
SDF4-205ENST00000465727 IGKV1-16P04430 117 aa15.98■□□□□ 0.15
SDF4-205ENST00000465727 SAA1P0DJI8 122 aaPredicted RBP15.98■□□□□ 0.15
SDF4-205ENST00000465727 CT45A6P0DMU7 189 aa15.98■□□□□ 0.15
SDF4-205ENST00000465727 CT45A5P0DMU8 189 aa15.98■□□□□ 0.15
SDF4-205ENST00000465727 CT45A7P0DMV0 189 aa15.98■□□□□ 0.15
SDF4-205ENST00000465727 ZNF841Q6ZN19 808 aa15.98■□□□□ 0.15
SDF4-205ENST00000465727 OSR1Q8TAX0 266 aaPredicted RBP15.98■□□□□ 0.15
SDF4-205ENST00000465727 LINC00574Q9H8X3 128 aa15.98■□□□□ 0.15
SDF4-205ENST00000465727 CBY3A6NI87 242 aa15.97■□□□□ 0.15
SDF4-205ENST00000465727 FSTL3O95633 263 aa15.97■□□□□ 0.15
SDF4-205ENST00000465727 RNFT1Q5M7Z0 435 aa15.97■□□□□ 0.15
SDF4-205ENST00000465727 AMMECR1LQ6DCA0 310 aa15.97■□□□□ 0.15
SDF4-205ENST00000465727 PATE2Q6UY27 113 aa15.97■□□□□ 0.15
SDF4-205ENST00000465727 TCF24Q7RTU0 167 aa15.97■□□□□ 0.15
SDF4-205ENST00000465727 LHBP01229 141 aa15.96■□□□□ 0.15
SDF4-205ENST00000465727 FOXA3P55318 350 aaPredicted RBP15.96■□□□□ 0.15
SDF4-205ENST00000465727 RBPMS2Q6ZRY4 209 aaKnown RBP15.96■□□□□ 0.15
SDF4-205ENST00000465727 SLC25A48Q6ZT89 311 aaKnown RBP15.96■□□□□ 0.15
SDF4-205ENST00000465727 H1FXQ92522 213 aaKnown RBP15.96■□□□□ 0.15
SDF4-205ENST00000465727 FMC1Q96HJ9 113 aa15.96■□□□□ 0.15
SDF4-205ENST00000465727 FER1L6-AS2Q96M78 137 aa15.96■□□□□ 0.15
SDF4-205ENST00000465727 RNF24Q9Y225 148 aa15.96■□□□□ 0.15
SDF4-205ENST00000465727 ZNF835Q9Y2P0 537 aa15.96■□□□□ 0.15
SDF4-205ENST00000465727 P01737 135 aa15.96■□□□□ 0.15
SDF4-205ENST00000465727 TMEM105Q8N8V8 129 aa15.96■□□□□ 0.15
SDF4-205ENST00000465727 THAP8Q8NA92 274 aa15.96■□□□□ 0.15
SDF4-205ENST00000465727 OR10W1Q8NGF6 305 aa15.96■□□□□ 0.15
SDF4-205ENST00000465727 TP73-AS1Q9UF72 201 aa15.96■□□□□ 0.15
SDF4-205ENST00000465727 LOC102724200A0A096LPH7 203 aaPredicted RBP15.95■□□□□ 0.14
SDF4-205ENST00000465727 C19orf71A6NCJ1 209 aa15.95■□□□□ 0.14
SDF4-205ENST00000465727 PRR33A8MZF0 331 aa15.95■□□□□ 0.14
SDF4-205ENST00000465727 SLC25A5P05141 298 aaKnown RBP15.95■□□□□ 0.14
SDF4-205ENST00000465727 PSG9Q00887 426 aa15.95■□□□□ 0.14
SDF4-205ENST00000465727 LINC00173Q6ZV60 143 aa15.95■□□□□ 0.14
SDF4-205ENST00000465727 TMEM178AQ8NBL3 297 aa15.95■□□□□ 0.14
SDF4-205ENST00000465727 MED13Q9UHV7 2174 aa15.95■□□□□ 0.14
SDF4-205ENST00000465727 GAGE12BA1L429 117 aa15.95■□□□□ 0.14
SDF4-205ENST00000465727 M0R296 226 aa15.95■□□□□ 0.14
SDF4-205ENST00000465727 GNG5P63218 68 aa15.95■□□□□ 0.14
SDF4-205ENST00000465727 CNEP1R1Q8N9A8 125 aa15.95■□□□□ 0.14
SDF4-205ENST00000465727 GTSF1Q8WW33 167 aa15.95■□□□□ 0.14
SDF4-205ENST00000465727 CSTL1Q9H114 145 aa15.95■□□□□ 0.14
SDF4-205ENST00000465727 IGHV1-18A0A0C4DH31 117 aa15.94■□□□□ 0.14
SDF4-205ENST00000465727 TM4SF5O14894 197 aa15.94■□□□□ 0.14
SDF4-205ENST00000465727 LTAP01374 205 aa15.94■□□□□ 0.14
SDF4-205ENST00000465727 GPR183P32249 361 aa15.94■□□□□ 0.14
SDF4-205ENST00000465727 SUB1P53999 127 aaKnown RBP eCLIP15.94■□□□□ 0.14
SDF4-205ENST00000465727 SEC11AP67812 179 aa15.94■□□□□ 0.14
SDF4-205ENST00000465727 TMEM164Q5U3C3 297 aa15.94■□□□□ 0.14
SDF4-205ENST00000465727 LINC01545Q5VT33 79 aa15.94■□□□□ 0.14
SDF4-205ENST00000465727 ERASQ7Z444 233 aa15.94■□□□□ 0.14
SDF4-205ENST00000465727 LINC00305Q7Z4B0 112 aa15.94■□□□□ 0.14
SDF4-205ENST00000465727 MOGAT3Q86VF5 341 aa15.94■□□□□ 0.14
SDF4-205ENST00000465727 FAM222BQ8WU58 562 aa15.94■□□□□ 0.14
SDF4-205ENST00000465727 PERPQ96FX8 193 aa15.94■□□□□ 0.14
SDF4-205ENST00000465727 RBMXL3Q8N7X1 1067 aaKnown RBP15.93■□□□□ 0.14
SDF4-205ENST00000465727 FAM169BQ8N8A8 192 aa15.93■□□□□ 0.14
SDF4-205ENST00000465727 AHCTF1Q8WYP5 2266 aa15.93■□□□□ 0.14
SDF4-205ENST00000465727 CHEK1O14757 476 aa15.93■□□□□ 0.14
SDF4-205ENST00000465727 MOSP00540 346 aa15.93■□□□□ 0.14
SDF4-205ENST00000465727 UBALD2Q8IYN6 164 aa15.93■□□□□ 0.14
SDF4-205ENST00000465727 C5orf17Q8NAS9 161 aa15.93■□□□□ 0.14
SDF4-205ENST00000465727 OR4A5Q8NH83 315 aa15.93■□□□□ 0.14
SDF4-205ENST00000465727 DAZAP1Q96EP5 407 aaKnown RBP15.93■□□□□ 0.14
SDF4-205ENST00000465727 PGLYRP4Q96LB8 373 aa15.93■□□□□ 0.14
SDF4-205ENST00000465727 RPUSD1Q9UJJ7 312 aaKnown RBP15.93■□□□□ 0.14
SDF4-205ENST00000465727 IGKV1D-37A0A075B6S9 117 aa15.92■□□□□ 0.14
SDF4-205ENST00000465727 PGPA6NDG6 321 aa15.92■□□□□ 0.14
SDF4-205ENST00000465727 APOA2P02652 100 aa15.92■□□□□ 0.14
SDF4-205ENST00000465727 COX8AP10176 69 aa15.92■□□□□ 0.14
SDF4-205ENST00000465727 KIR2DL2P43627 348 aaPredicted RBP15.92■□□□□ 0.14
SDF4-205ENST00000465727 NPIPB3Q92617 1050 aa15.92■□□□□ 0.14
SDF4-205ENST00000465727 SSBP2P81877 361 aaPredicted RBP15.91■□□□□ 0.14
SDF4-205ENST00000465727 TMEM177Q53S58 311 aa15.91■□□□□ 0.14
SDF4-205ENST00000465727 ZNF833PQ6ZTB9 187 aa15.91■□□□□ 0.14
SDF4-205ENST00000465727 HARBI1Q96MB7 349 aa15.91■□□□□ 0.14
SDF4-205ENST00000465727 DSCAMO60469 2012 aa15.91■□□□□ 0.14
SDF4-205ENST00000465727 PCNX2A6NKB5 2137 aa15.91■□□□□ 0.14
SDF4-205ENST00000465727 NPIPB6E9PJ23 425 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 169.7 ms