RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 Q8N2B8 174 aa1.29□□□□□ -2.2
CLK1-208ENST00000464454 OR11H6Q8NGC7 330 aa1.29□□□□□ -2.2
CLK1-208ENST00000464454 OR4D11Q8NGI4 311 aa1.29□□□□□ -2.2
CLK1-208ENST00000464454 FAM172AQ8WUF8 416 aa1.29□□□□□ -2.2
CLK1-208ENST00000464454 SERPINI1Q99574 410 aa1.29□□□□□ -2.2
CLK1-208ENST00000464454 SIGMAR1Q99720 223 aa1.29□□□□□ -2.2
CLK1-208ENST00000464454 TRIM4Q9C037 500 aa1.29□□□□□ -2.2
CLK1-208ENST00000464454 CCDC90BQ9GZT6 254 aa1.29□□□□□ -2.2
CLK1-208ENST00000464454 ERGIC3Q9Y282 383 aa1.29□□□□□ -2.2
CLK1-208ENST00000464454 IGKV3-7A0A075B6H7 116 aa1.28□□□□□ -2.2
CLK1-208ENST00000464454 A0A0D9SG52 128 aa1.28□□□□□ -2.2
CLK1-208ENST00000464454 H0YJX3 145 aa1.28□□□□□ -2.2
CLK1-208ENST00000464454 BUB1B-PAK6H3BSN5 160 aa1.28□□□□□ -2.2
CLK1-208ENST00000464454 SHBGP04278 402 aa1.28□□□□□ -2.2
CLK1-208ENST00000464454 ZNF846Q147U1 533 aa1.28□□□□□ -2.2
CLK1-208ENST00000464454 LIN52Q52LA3 116 aa1.28□□□□□ -2.2
CLK1-208ENST00000464454 KHDC3LQ587J8 217 aa1.28□□□□□ -2.2
CLK1-208ENST00000464454 C10orf55Q5SWW7 151 aa1.28□□□□□ -2.2
CLK1-208ENST00000464454 DPPA3Q6W0C5 159 aa1.28□□□□□ -2.2
CLK1-208ENST00000464454 HIST3H2BBQ8N257 126 aa1.28□□□□□ -2.2
CLK1-208ENST00000464454 CT55Q8WUE5 264 aa1.28□□□□□ -2.2
CLK1-208ENST00000464454 BTF3L4Q96K17 158 aa1.28□□□□□ -2.2
CLK1-208ENST00000464454 HOPXQ9BPY8 73 aaPredicted RBP1.28□□□□□ -2.2
CLK1-208ENST00000464454 RETNLBQ9BQ08 111 aa1.28□□□□□ -2.2
CLK1-208ENST00000464454 MIXL1Q9H2W2 232 aa1.28□□□□□ -2.2
CLK1-208ENST00000464454 C19orf12Q9NSK7 152 aa1.28□□□□□ -2.2
CLK1-208ENST00000464454 TAS2R7Q9NYW3 318 aa1.28□□□□□ -2.2
CLK1-208ENST00000464454 OR5AC2Q9NZP5 309 aa1.28□□□□□ -2.2
CLK1-208ENST00000464454 ROBO3Q96MS0 1386 aa1.28□□□□□ -2.2
CLK1-208ENST00000464454 NEO1Q92859 1461 aa1.28□□□□□ -2.2
CLK1-208ENST00000464454 ECM29Q5VYK3 1845 aa1.28□□□□□ -2.2
CLK1-208ENST00000464454 MED12LQ86YW9 2145 aa1.28□□□□□ -2.2
CLK1-208ENST00000464454 RP1P56715 2156 aa1.28□□□□□ -2.2
CLK1-208ENST00000464454 FCGBPQ9Y6R7 5405 aaPredicted RBP1.27□□□□□ -2.21
CLK1-208ENST00000464454 LAMB2P55268 1798 aa1.27□□□□□ -2.21
CLK1-208ENST00000464454 TRAV14DV4A0A0A6YYC5 116 aa1.27□□□□□ -2.21
CLK1-208ENST00000464454 hADV38S2A0JD32 116 aa1.27□□□□□ -2.21
CLK1-208ENST00000464454 PPP5D1E7EU14 171 aa1.27□□□□□ -2.21
CLK1-208ENST00000464454 ZNF682O95780 498 aa1.27□□□□□ -2.21
CLK1-208ENST00000464454 TCL1BO95988 128 aa1.27□□□□□ -2.21
CLK1-208ENST00000464454 IFNA1P01562 189 aa1.27□□□□□ -2.21
CLK1-208ENST00000464454 COX6A1P12074 109 aa1.27□□□□□ -2.21
CLK1-208ENST00000464454 CDC42P60953 191 aa1.27□□□□□ -2.21
CLK1-208ENST00000464454 S100A7AQ86SG5 101 aa1.27□□□□□ -2.21
CLK1-208ENST00000464454 SIGLECL1Q8N7X8 197 aa1.27□□□□□ -2.21
CLK1-208ENST00000464454 GDPD1Q8N9F7 314 aa1.27□□□□□ -2.21
CLK1-208ENST00000464454 OR4E2Q8NGC2 313 aa1.27□□□□□ -2.21
CLK1-208ENST00000464454 OR5A1Q8NGJ0 315 aa1.27□□□□□ -2.21
CLK1-208ENST00000464454 PYDC1Q8WXC3 89 aa1.27□□□□□ -2.21
CLK1-208ENST00000464454 PCBD2Q9H0N5 130 aa1.27□□□□□ -2.21
CLK1-208ENST00000464454 SH3BGRL3Q9H299 93 aa1.27□□□□□ -2.21
CLK1-208ENST00000464454 GID8Q9NWU2 228 aa1.27□□□□□ -2.21
CLK1-208ENST00000464454 ANAPC1Q9H1A4 1944 aa1.27□□□□□ -2.21
CLK1-208ENST00000464454 COL6A6A6NMZ7 2263 aa1.26□□□□□ -2.21
CLK1-208ENST00000464454 ARFGEF3Q5TH69 2177 aa1.26□□□□□ -2.21
CLK1-208ENST00000464454 IGKV1D-42A0A075B6H8 117 aa1.26□□□□□ -2.21
CLK1-208ENST00000464454 PDE6DO43924 150 aa1.26□□□□□ -2.21
CLK1-208ENST00000464454 OR2J2O76002 312 aa1.26□□□□□ -2.21
CLK1-208ENST00000464454 SERPINE1P05121 402 aa1.26□□□□□ -2.21
CLK1-208ENST00000464454 CTSDP07339 412 aaPredicted RBP1.26□□□□□ -2.21
CLK1-208ENST00000464454 CRYGAP11844 174 aa1.26□□□□□ -2.21
CLK1-208ENST00000464454 SPI1P17947 270 aa1.26□□□□□ -2.21
CLK1-208ENST00000464454 S100A4P26447 101 aaKnown RBP1.26□□□□□ -2.21
CLK1-208ENST00000464454 FKBP2P26885 142 aaKnown RBP1.26□□□□□ -2.21
CLK1-208ENST00000464454 SURF2Q15527 256 aaPredicted RBP1.26□□□□□ -2.21
CLK1-208ENST00000464454 DEFB115Q30KQ5 88 aa1.26□□□□□ -2.21
CLK1-208ENST00000464454 C12orf74Q32Q52 190 aa1.26□□□□□ -2.21
CLK1-208ENST00000464454 SPANXN5Q5MJ07 72 aa1.26□□□□□ -2.21
CLK1-208ENST00000464454 TMEM78Q5T7P6 136 aa1.26□□□□□ -2.21
CLK1-208ENST00000464454 Q6ZQT0 140 aa1.26□□□□□ -2.21
CLK1-208ENST00000464454 TRAPPC6BQ86SZ2 158 aa1.26□□□□□ -2.21
CLK1-208ENST00000464454 C12orf29Q8N999 325 aa1.26□□□□□ -2.21
CLK1-208ENST00000464454 OR51A2Q8NGJ7 313 aa1.26□□□□□ -2.21
CLK1-208ENST00000464454 GINS3Q9BRX5 216 aa1.26□□□□□ -2.21
CLK1-208ENST00000464454 REG4Q9BYZ8 158 aa1.26□□□□□ -2.21
CLK1-208ENST00000464454 RNASE7Q9H1E1 156 aaKnown RBP1.26□□□□□ -2.21
CLK1-208ENST00000464454 BIN3Q9NQY0 253 aa1.26□□□□□ -2.21
CLK1-208ENST00000464454 PYCARDQ9ULZ3 195 aa1.26□□□□□ -2.21
CLK1-208ENST00000464454 UFC1Q9Y3C8 167 aa1.26□□□□□ -2.21
CLK1-208ENST00000464454 ARAP1Q96P48 1450 aa1.25□□□□□ -2.21
CLK1-208ENST00000464454 RTL1A6NKG5 1358 aa1.25□□□□□ -2.21
CLK1-208ENST00000464454 CPDO75976 1380 aa1.25□□□□□ -2.21
CLK1-208ENST00000464454 GNG14A0A1W2PPG7 69 aa1.25□□□□□ -2.21
CLK1-208ENST00000464454 C19orf84I3L1E1 186 aa1.25□□□□□ -2.21
CLK1-208ENST00000464454 ARPC4P59998 168 aa1.25□□□□□ -2.21
CLK1-208ENST00000464454 GNG3P63215 75 aa1.25□□□□□ -2.21
CLK1-208ENST00000464454 S100A12P80511 92 aa1.25□□□□□ -2.21
CLK1-208ENST00000464454 RHEBQ15382 184 aa1.25□□□□□ -2.21
CLK1-208ENST00000464454 SMIM15Q7Z3B0 74 aa1.25□□□□□ -2.21
CLK1-208ENST00000464454 GRINAQ7Z429 371 aa1.25□□□□□ -2.21
CLK1-208ENST00000464454 C15orf53Q8NAA6 179 aa1.25□□□□□ -2.21
CLK1-208ENST00000464454 OR10J5Q8NHC4 309 aa1.25□□□□□ -2.21
CLK1-208ENST00000464454 CEP19Q96LK0 163 aa1.25□□□□□ -2.21
CLK1-208ENST00000464454 SLC50A1Q9BRV3 221 aa1.25□□□□□ -2.21
CLK1-208ENST00000464454 KIFC1Q9BW19 673 aa1.25□□□□□ -2.21
CLK1-208ENST00000464454 TRABDQ9H4I3 376 aa1.25□□□□□ -2.21
CLK1-208ENST00000464454 MRPL40Q9NQ50 206 aaKnown RBP1.25□□□□□ -2.21
CLK1-208ENST00000464454 C14orf105Q9NVL8 296 aa1.25□□□□□ -2.21
CLK1-208ENST00000464454 PRNDQ9UKY0 176 aa1.25□□□□□ -2.21
CLK1-208ENST00000464454 MICAL3Q7RTP6 2002 aa1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms