RNA–Protein interactions for RNA: ENST00000464316.5

CCNL1-204, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 3,843 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-204ENST00000464316 FCER1GP30273 86 aa3.17□□□□□ -1.9
CCNL1-204ENST00000464316 LTBRP36941 435 aa3.17□□□□□ -1.9
CCNL1-204ENST00000464316 CFHR1Q03591 330 aa3.17□□□□□ -1.9
CCNL1-204ENST00000464316 MRPL14Q6P1L8 145 aaKnown RBP3.17□□□□□ -1.9
CCNL1-204ENST00000464316 ACP7Q6ZNF0 438 aa3.17□□□□□ -1.9
CCNL1-204ENST00000464316 ORMDL3Q8N138 153 aa3.17□□□□□ -1.9
CCNL1-204ENST00000464316 OR13A1Q8NGR1 328 aa3.17□□□□□ -1.9
CCNL1-204ENST00000464316 OR10X1Q8NGY0 326 aa3.17□□□□□ -1.9
CCNL1-204ENST00000464316 ZNF502Q8TBZ5 544 aa3.17□□□□□ -1.9
CCNL1-204ENST00000464316 NEU4Q8WWR8 484 aaPredicted RBP3.17□□□□□ -1.9
CCNL1-204ENST00000464316 FAM173AQ9BQD7 235 aa3.17□□□□□ -1.9
CCNL1-204ENST00000464316 NAA38Q9BRA0 125 aaKnown RBP3.17□□□□□ -1.9
CCNL1-204ENST00000464316 TPPP3Q9BW30 176 aa3.17□□□□□ -1.9
CCNL1-204ENST00000464316 GP6Q9HCN6 339 aa3.17□□□□□ -1.9
CCNL1-204ENST00000464316 TMEM14BQ9NUH8 114 aa3.17□□□□□ -1.9
CCNL1-204ENST00000464316 KMT2EQ8IZD2 1858 aa3.16□□□□□ -1.9
CCNL1-204ENST00000464316 CACNA1DQ01668 2161 aa3.16□□□□□ -1.9
CCNL1-204ENST00000464316 MYO9BQ13459 2157 aa3.16□□□□□ -1.9
CCNL1-204ENST00000464316 TRAV26-1A0A087WT03 109 aa3.16□□□□□ -1.9
CCNL1-204ENST00000464316 hADV38S2A0JD32 116 aa3.16□□□□□ -1.9
CCNL1-204ENST00000464316 SHISA9B4DS77 424 aa3.16□□□□□ -1.9
CCNL1-204ENST00000464316 UPK2O00526 184 aa3.16□□□□□ -1.9
CCNL1-204ENST00000464316 CRYBA4P53673 196 aa3.16□□□□□ -1.9
CCNL1-204ENST00000464316 B3GALT5-AS1P59052 145 aa3.16□□□□□ -1.9
CCNL1-204ENST00000464316 CACNG7P62955 275 aa3.16□□□□□ -1.9
CCNL1-204ENST00000464316 MEF2CQ06413 473 aaPredicted RBP3.16□□□□□ -1.9
CCNL1-204ENST00000464316 TAL2Q16559 108 aa3.16□□□□□ -1.9
CCNL1-204ENST00000464316 POU2AF1Q16633 256 aa3.16□□□□□ -1.9
CCNL1-204ENST00000464316 TMEM164Q5U3C3 297 aa3.16□□□□□ -1.9
CCNL1-204ENST00000464316 SRSF12Q8WXF0 261 aaKnown RBP3.16□□□□□ -1.9
CCNL1-204ENST00000464316 LINC00479Q96M42 142 aa3.16□□□□□ -1.9
CCNL1-204ENST00000464316 CLUHP3Q96NS8 147 aa3.16□□□□□ -1.9
CCNL1-204ENST00000464316 SLC25A2Q9BXI2 301 aa3.16□□□□□ -1.9
CCNL1-204ENST00000464316 KLF12Q9Y4X4 402 aa3.16□□□□□ -1.9
CCNL1-204ENST00000464316 TNRC6BQ9UPQ9 1833 aaKnown RBP3.16□□□□□ -1.9
CCNL1-204ENST00000464316 IQCF6A8MYZ5 107 aa3.16□□□□□ -1.9
CCNL1-204ENST00000464316 SS18L1O75177 396 aaPredicted RBP3.16□□□□□ -1.9
CCNL1-204ENST00000464316 ORM2P19652 201 aa3.16□□□□□ -1.9
CCNL1-204ENST00000464316 PLA2G5P39877 138 aa3.16□□□□□ -1.9
CCNL1-204ENST00000464316 BRWD1-AS2P59051 145 aa3.16□□□□□ -1.9
CCNL1-204ENST00000464316 SRSF1Q07955 248 aaKnown RBP eCLIP3.16□□□□□ -1.96e-12■□□□□ 8.7
CCNL1-204ENST00000464316 GDF5OSQ5U4N7 250 aa3.16□□□□□ -1.9
CCNL1-204ENST00000464316 LINC00173Q6ZV60 143 aa3.16□□□□□ -1.9
CCNL1-204ENST00000464316 C2orf91Q6ZV80 131 aa3.16□□□□□ -1.9
CCNL1-204ENST00000464316 LINC00305Q7Z4B0 112 aa3.16□□□□□ -1.9
CCNL1-204ENST00000464316 MDP1Q86V88 176 aa3.16□□□□□ -1.9
CCNL1-204ENST00000464316 FAM90A1Q86YD7 464 aa3.16□□□□□ -1.9
CCNL1-204ENST00000464316 OR9G1Q8NH87 305 aa3.16□□□□□ -1.9
CCNL1-204ENST00000464316 PRELID3AQ96N28 172 aa3.16□□□□□ -1.9
CCNL1-204ENST00000464316 SPATA25Q9BR10 227 aa3.16□□□□□ -1.9
CCNL1-204ENST00000464316 NHP2Q9NX24 153 aaKnown RBP3.16□□□□□ -1.9
CCNL1-204ENST00000464316 F11RQ9Y624 299 aaKnown RBP3.16□□□□□ -1.9
CCNL1-204ENST00000464316 IGHV3-64DA0A0J9YX35 117 aa3.16□□□□□ -1.9
CCNL1-204ENST00000464316 A0A1W2PRD5 423 aa3.16□□□□□ -1.9
CCNL1-204ENST00000464316 A0A1W2PRF3 423 aa3.16□□□□□ -1.9
CCNL1-204ENST00000464316 A0A1W2PRM7 423 aa3.16□□□□□ -1.9
CCNL1-204ENST00000464316 TCRBV4S1A1TA0A5B7 111 aa3.16□□□□□ -1.9
CCNL1-204ENST00000464316 OR11H12B2RN74 326 aa3.16□□□□□ -1.9
CCNL1-204ENST00000464316 ATP5LO75964 103 aa3.16□□□□□ -1.9
CCNL1-204ENST00000464316 APOMO95445 188 aa3.16□□□□□ -1.9
CCNL1-204ENST00000464316 MOSP00540 346 aa3.16□□□□□ -1.9
CCNL1-204ENST00000464316 SPINK8P0C7L1 97 aa3.16□□□□□ -1.9
CCNL1-204ENST00000464316 COX6A1P12074 109 aa3.16□□□□□ -1.9
CCNL1-204ENST00000464316 CEBPDP49716 269 aaPredicted RBP3.16□□□□□ -1.9
CCNL1-204ENST00000464316 TWIST1Q15672 202 aa3.16□□□□□ -1.9
CCNL1-204ENST00000464316 INO80CQ6PI98 192 aaPredicted RBP3.16□□□□□ -1.9
CCNL1-204ENST00000464316 FOXI2Q6ZQN5 318 aa3.16□□□□□ -1.9
CCNL1-204ENST00000464316 OR11H1Q8NG94 326 aa3.16□□□□□ -1.9
CCNL1-204ENST00000464316 OR11H2Q8NH07 326 aa3.16□□□□□ -1.9
CCNL1-204ENST00000464316 OSR1Q8TAX0 266 aaPredicted RBP3.16□□□□□ -1.9
CCNL1-204ENST00000464316 ZNF418Q8TF45 676 aaPredicted RBP3.16□□□□□ -1.9
CCNL1-204ENST00000464316 PLPPR2Q96GM1 343 aa3.16□□□□□ -1.9
CCNL1-204ENST00000464316 COQ2Q96H96 371 aa3.16□□□□□ -1.9
CCNL1-204ENST00000464316 OTORQ9NRC9 128 aa3.16□□□□□ -1.9
CCNL1-204ENST00000464316 TRAV3A0A0B4J244 114 aa3.15□□□□□ -1.9
CCNL1-204ENST00000464316 LOC389332A0A1B0GUA5 103 aa3.15□□□□□ -1.9
CCNL1-204ENST00000464316 NCBP2LA6PVI3 153 aaKnown RBP3.15□□□□□ -1.9
CCNL1-204ENST00000464316 C3orf80F5H4A9 247 aa3.15□□□□□ -1.9
CCNL1-204ENST00000464316 PYYP10082 97 aa3.15□□□□□ -1.9
CCNL1-204ENST00000464316 SPINK2P20155 84 aa3.15□□□□□ -1.9
CCNL1-204ENST00000464316 CKS2P33552 79 aa3.15□□□□□ -1.9
CCNL1-204ENST00000464316 ZNF138P52744 262 aa3.15□□□□□ -1.9
CCNL1-204ENST00000464316 ETDBQ3ZM63 59 aa3.15□□□□□ -1.9
CCNL1-204ENST00000464316 RPL39P5Q59GN2 51 aa3.15□□□□□ -1.9
CCNL1-204ENST00000464316 FAM120AOSQ5T036 256 aa3.15□□□□□ -1.9
CCNL1-204ENST00000464316 PPP1R32Q7Z5V6 425 aa3.15□□□□□ -1.9
CCNL1-204ENST00000464316 CXorf67Q86X51 503 aaPredicted RBP3.15□□□□□ -1.9
CCNL1-204ENST00000464316 NPIPB3Q92617 1050 aa3.15□□□□□ -1.9
CCNL1-204ENST00000464316 HIST1H4GQ99525 98 aa3.15□□□□□ -1.9
CCNL1-204ENST00000464316 ANAPC13Q9BS18 74 aa3.15□□□□□ -1.9
CCNL1-204ENST00000464316 MCRIP2Q9BUT9 160 aaKnown RBP3.15□□□□□ -1.9
CCNL1-204ENST00000464316 PRSS22Q9GZN4 317 aa3.15□□□□□ -1.9
CCNL1-204ENST00000464316 MAP1LC3AQ9H492 121 aa3.15□□□□□ -1.9
CCNL1-204ENST00000464316 CALYQ9NYX4 217 aa3.15□□□□□ -1.9
CCNL1-204ENST00000464316 MED12Q93074 2177 aa3.15□□□□□ -1.9
CCNL1-204ENST00000464316 ARHGAP21Q5T5U3 1957 aa3.15□□□□□ -1.91
CCNL1-204ENST00000464316 TRAV5A0A0B4J249 113 aa3.15□□□□□ -1.91
CCNL1-204ENST00000464316 WISP2O76076 250 aa3.15□□□□□ -1.91
CCNL1-204ENST00000464316 GOSR1O95249 250 aa3.15□□□□□ -1.91
CCNL1-204ENST00000464316 TCRAP04437 139 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms