RNA–Protein interactions for RNA: ENST00000464139.5

TUBGCP3-204, Transcript of tubulin gamma complex associated protein 3, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP3, Length 2,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-204ENST00000464139 ORM2P19652 201 aa16.29■□□□□ 0.2
TUBGCP3-204ENST00000464139 BPIFB3P59826 476 aa16.29■□□□□ 0.2
TUBGCP3-204ENST00000464139 SELENOTP62341 195 aa16.29■□□□□ 0.2
TUBGCP3-204ENST00000464139 LINC00305Q7Z4B0 112 aa16.29■□□□□ 0.2
TUBGCP3-204ENST00000464139 LY6LH3BQJ8 138 aa16.29■□□□□ 0.2
TUBGCP3-204ENST00000464139 MRPL41Q8IXM3 137 aaKnown RBP16.29■□□□□ 0.2
TUBGCP3-204ENST00000464139 LY6G5BQ8NDX9 201 aa16.29■□□□□ 0.2
TUBGCP3-204ENST00000464139 BTF3L4Q96K17 158 aa16.29■□□□□ 0.2
TUBGCP3-204ENST00000464139 LINC00479Q96M42 142 aa16.29■□□□□ 0.2
TUBGCP3-204ENST00000464139 RNASE7Q9H1E1 156 aaKnown RBP16.29■□□□□ 0.2
TUBGCP3-204ENST00000464139 CBLN4Q9NTU7 201 aa16.29■□□□□ 0.2
TUBGCP3-204ENST00000464139 TEX22C9J3V5 150 aa16.28■□□□□ 0.2
TUBGCP3-204ENST00000464139 CNN1P51911 297 aaKnown RBP16.28■□□□□ 0.2
TUBGCP3-204ENST00000464139 ETFRF1Q6IPR1 90 aa16.28■□□□□ 0.2
TUBGCP3-204ENST00000464139 OR1B1Q8NGR6 318 aa16.28■□□□□ 0.2
TUBGCP3-204ENST00000464139 GSX1Q9H4S2 264 aaPredicted RBP16.28■□□□□ 0.2
TUBGCP3-204ENST00000464139 AMMECR1Q9Y4X0 333 aaPredicted RBP16.28■□□□□ 0.2
TUBGCP3-204ENST00000464139 V9GYV3 84 aa16.28■□□□□ 0.2
TUBGCP3-204ENST00000464139 TIGITQ495A1 244 aa16.28■□□□□ 0.2
TUBGCP3-204ENST00000464139 PVRIGQ6DKI7 326 aa16.28■□□□□ 0.2
TUBGCP3-204ENST00000464139 TIMM23O14925 209 aa16.27■□□□□ 0.2
TUBGCP3-204ENST00000464139 PDLIM4P50479 330 aa16.27■□□□□ 0.2
TUBGCP3-204ENST00000464139 CTAG1AP78358 180 aa16.27■□□□□ 0.2
TUBGCP3-204ENST00000464139 PLGLAQ15195 96 aa16.27■□□□□ 0.2
TUBGCP3-204ENST00000464139 HILPDAQ9Y5L2 63 aa16.27■□□□□ 0.2
TUBGCP3-204ENST00000464139 DMRT1Q9Y5R6 373 aa16.27■□□□□ 0.2
TUBGCP3-204ENST00000464139 IGLV2-8P01709 118 aa16.27■□□□□ 0.19
TUBGCP3-204ENST00000464139 FRMD6-AS1P0C7T7 363 aa16.27■□□□□ 0.19
TUBGCP3-204ENST00000464139 FXYD3Q14802 87 aa16.27■□□□□ 0.19
TUBGCP3-204ENST00000464139 NHLRC2Q8NBF2 726 aa16.27■□□□□ 0.19
TUBGCP3-204ENST00000464139 TIMD4Q96H15 378 aa16.27■□□□□ 0.19
TUBGCP3-204ENST00000464139 A0A1B0GUS0 222 aa16.26■□□□□ 0.19
TUBGCP3-204ENST00000464139 MGST1P10620 155 aaKnown RBP16.26■□□□□ 0.19
TUBGCP3-204ENST00000464139 CBLN1P23435 193 aa16.26■□□□□ 0.19
TUBGCP3-204ENST00000464139 KLRD1Q13241 179 aa16.26■□□□□ 0.19
TUBGCP3-204ENST00000464139 RPEL1Q2QD12 228 aa16.26■□□□□ 0.19
TUBGCP3-204ENST00000464139 C11orf71Q6IPW1 123 aa16.26■□□□□ 0.19
TUBGCP3-204ENST00000464139 SRSF12Q8WXF0 261 aaKnown RBP16.26■□□□□ 0.19
TUBGCP3-204ENST00000464139 FXYD5Q96DB9 178 aa16.26■□□□□ 0.19
TUBGCP3-204ENST00000464139 A0A1W2PRD5 423 aa16.26■□□□□ 0.19
TUBGCP3-204ENST00000464139 A0A1W2PRF3 423 aa16.26■□□□□ 0.19
TUBGCP3-204ENST00000464139 A0A1W2PRM7 423 aa16.26■□□□□ 0.19
TUBGCP3-204ENST00000464139 ADMP35318 185 aa16.26■□□□□ 0.19
TUBGCP3-204ENST00000464139 LY6DQ14210 128 aa16.26■□□□□ 0.19
TUBGCP3-204ENST00000464139 IGF2BP2-AS1Q96M15 143 aa16.26■□□□□ 0.19
TUBGCP3-204ENST00000464139 F11RQ9Y624 299 aaKnown RBP16.26■□□□□ 0.19
TUBGCP3-204ENST00000464139 CD24P25063 80 aa16.25■□□□□ 0.19
TUBGCP3-204ENST00000464139 TPTE2P1Q5T6R2 138 aa16.25■□□□□ 0.19
TUBGCP3-204ENST00000464139 ASPHD1Q5U4P2 390 aa16.25■□□□□ 0.19
TUBGCP3-204ENST00000464139 TMEM116Q8NCL8 245 aa16.25■□□□□ 0.19
TUBGCP3-204ENST00000464139 C22orf15Q8WYQ4 148 aa16.25■□□□□ 0.19
TUBGCP3-204ENST00000464139 ASH1LQ9NR48 2969 aaKnown RBP16.25■□□□□ 0.19
TUBGCP3-204ENST00000464139 ZNF329Q86UD4 541 aa16.25■□□□□ 0.19
TUBGCP3-204ENST00000464139 OR8I2Q8N0Y5 310 aa16.25■□□□□ 0.19
TUBGCP3-204ENST00000464139 TRGV9Q99603 122 aa16.25■□□□□ 0.19
TUBGCP3-204ENST00000464139 HIVEP3Q5T1R4 2406 aa16.24■□□□□ 0.19
TUBGCP3-204ENST00000464139 GCGP01275 180 aa16.24■□□□□ 0.19
TUBGCP3-204ENST00000464139 HTR1DP28221 377 aa16.24■□□□□ 0.19
TUBGCP3-204ENST00000464139 YPEL3P61236 119 aaPredicted RBP16.24■□□□□ 0.19
TUBGCP3-204ENST00000464139 CSMD1Q96PZ7 3565 aa16.24■□□□□ 0.19
TUBGCP3-204ENST00000464139 SPINK4O60575 86 aa16.24■□□□□ 0.19
TUBGCP3-204ENST00000464139 HIST1H1BP16401 226 aaKnown RBP16.24■□□□□ 0.19
TUBGCP3-204ENST00000464139 RANP62826 216 aaKnown RBP16.24■□□□□ 0.19
TUBGCP3-204ENST00000464139 MMDQ15546 238 aa16.24■□□□□ 0.19
TUBGCP3-204ENST00000464139 BLNKQ8WV28 456 aa16.24■□□□□ 0.19
TUBGCP3-204ENST00000464139 PRDM13Q9H4Q3 707 aa16.24■□□□□ 0.19
TUBGCP3-204ENST00000464139 TRAV34A0A0B4J273 112 aa16.23■□□□□ 0.19
TUBGCP3-204ENST00000464139 PERPQ96FX8 193 aa16.23■□□□□ 0.19
TUBGCP3-204ENST00000464139 SSBP3Q9BWW4 388 aaPredicted RBP16.23■□□□□ 0.19
TUBGCP3-204ENST00000464139 LOC105371242A0A075B767 164 aa16.23■□□□□ 0.19
TUBGCP3-204ENST00000464139 CNIH1O95406 144 aa16.23■□□□□ 0.19
TUBGCP3-204ENST00000464139 IER3P46695 156 aa16.23■□□□□ 0.19
TUBGCP3-204ENST00000464139 TMEM256Q8N2U0 113 aa16.23■□□□□ 0.19
TUBGCP3-204ENST00000464139 OR1L6Q8NGR2 347 aa16.23■□□□□ 0.19
TUBGCP3-204ENST00000464139 DPM3Q9P2X0 92 aa16.23■□□□□ 0.19
TUBGCP3-204ENST00000464139 A0A1W2PPR1 153 aa16.22■□□□□ 0.19
TUBGCP3-204ENST00000464139 TCL1AP56279 114 aa16.22■□□□□ 0.19
TUBGCP3-204ENST00000464139 GNG5P63218 68 aa16.22■□□□□ 0.19
TUBGCP3-204ENST00000464139 LEMD1Q68G75 181 aa16.22■□□□□ 0.19
TUBGCP3-204ENST00000464139 OSTCQ9NRP0 149 aa16.22■□□□□ 0.19
TUBGCP3-204ENST00000464139 TRAV9-1A0A075B6T8 112 aa16.22■□□□□ 0.19
TUBGCP3-204ENST00000464139 GRIFINA4D1Z8 144 aa16.22■□□□□ 0.19
TUBGCP3-204ENST00000464139 CORTO00230 105 aa16.22■□□□□ 0.19
TUBGCP3-204ENST00000464139 SLC35B1P78383 322 aa16.22■□□□□ 0.19
TUBGCP3-204ENST00000464139 FBLN7Q53RD9 439 aa16.22■□□□□ 0.19
TUBGCP3-204ENST00000464139 TRAV20A0A0B4J274 112 aa16.21■□□□□ 0.19
TUBGCP3-204ENST00000464139 HYPMO75409 117 aa16.21■□□□□ 0.19
TUBGCP3-204ENST00000464139 C9orf152Q5JTZ5 239 aa16.21■□□□□ 0.19
TUBGCP3-204ENST00000464139 IBA57Q5T440 356 aaKnown RBP16.21■□□□□ 0.19
TUBGCP3-204ENST00000464139 OR11H6Q8NGC7 330 aa16.21■□□□□ 0.19
TUBGCP3-204ENST00000464139 NEU4Q8WWR8 484 aaPredicted RBP16.21■□□□□ 0.19
TUBGCP3-204ENST00000464139 WNT10AQ9GZT5 417 aa16.21■□□□□ 0.19
TUBGCP3-204ENST00000464139 MRPL18Q9H0U6 180 aaKnown RBP16.21■□□□□ 0.19
TUBGCP3-204ENST00000464139 SERTAD4Q9NUC0 356 aa16.21■□□□□ 0.19
TUBGCP3-204ENST00000464139 CDC42EP3Q9UKI2 254 aa16.21■□□□□ 0.19
TUBGCP3-204ENST00000464139 PEX7O00628 323 aa16.21■□□□□ 0.18
TUBGCP3-204ENST00000464139 ISLRO14498 428 aa16.21■□□□□ 0.18
TUBGCP3-204ENST00000464139 NUPR1O60356 82 aa16.21■□□□□ 0.18
TUBGCP3-204ENST00000464139 RNF5Q99942 180 aa16.21■□□□□ 0.18
TUBGCP3-204ENST00000464139 MED13LQ71F56 2210 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms