RNA–Protein interactions for RNA: ENST00000463428.5

PHACTR4-203, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 1,421 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-203ENST00000463428 NPVFQ9HCQ7 196 aa10.67□□□□□ -0.7
PHACTR4-203ENST00000463428 GAR1Q9NY12 217 aaKnown RBP10.67□□□□□ -0.7
PHACTR4-203ENST00000463428 GNG7O60262 68 aa10.67□□□□□ -0.7
PHACTR4-203ENST00000463428 CXCL2P19875 107 aa10.67□□□□□ -0.7
PHACTR4-203ENST00000463428 ARL3P36405 182 aa10.67□□□□□ -0.7
PHACTR4-203ENST00000463428 FHL3Q13643 280 aa10.67□□□□□ -0.7
PHACTR4-203ENST00000463428 SPSB3Q6PJ21 355 aa10.67□□□□□ -0.7
PHACTR4-203ENST00000463428 TREML4Q6UXN2 200 aa10.67□□□□□ -0.7
PHACTR4-203ENST00000463428 INO80EQ8NBZ0 244 aaPredicted RBP10.67□□□□□ -0.7
PHACTR4-203ENST00000463428 OR11H1Q8NG94 326 aa10.67□□□□□ -0.7
PHACTR4-203ENST00000463428 OR1N2Q8NGR9 330 aa10.67□□□□□ -0.7
PHACTR4-203ENST00000463428 DUX3Q96PT4 197 aa10.67□□□□□ -0.7
PHACTR4-203ENST00000463428 TMEM147Q9BVK8 224 aa10.67□□□□□ -0.7
PHACTR4-203ENST00000463428 MFFQ9GZY8 342 aa10.67□□□□□ -0.7
PHACTR4-203ENST00000463428 ZC4H2Q9NQZ6 224 aa10.67□□□□□ -0.7
PHACTR4-203ENST00000463428 LSM4Q9Y4Z0 139 aaKnown RBP10.67□□□□□ -0.7
PHACTR4-203ENST00000463428 TRAV30A0A087WSZ9 112 aa10.66□□□□□ -0.7
PHACTR4-203ENST00000463428 CCL24O00175 119 aa10.66□□□□□ -0.7
PHACTR4-203ENST00000463428 GGCTO75223 188 aaKnown RBP10.66□□□□□ -0.7
PHACTR4-203ENST00000463428 NUP62P37198 522 aaPredicted RBP10.66□□□□□ -0.7
PHACTR4-203ENST00000463428 LILRB2Q8N423 598 aa10.66□□□□□ -0.7
PHACTR4-203ENST00000463428 SMIM3Q9BZL3 60 aa10.66□□□□□ -0.7
PHACTR4-203ENST00000463428 UQCC1Q9NVA1 299 aa10.66□□□□□ -0.7
PHACTR4-203ENST00000463428 FBXL17Q9UF56 701 aa10.66□□□□□ -0.7
PHACTR4-203ENST00000463428 WDR83OSQ9Y284 106 aa10.66□□□□□ -0.7
PHACTR4-203ENST00000463428 LINC01619G3V211 115 aa10.65□□□□□ -0.7
PHACTR4-203ENST00000463428 OR2C1O95371 312 aa10.65□□□□□ -0.7
PHACTR4-203ENST00000463428 OR10J1P30954 320 aa10.65□□□□□ -0.7
PHACTR4-203ENST00000463428 MYCNOSP40205 109 aa10.65□□□□□ -0.7
PHACTR4-203ENST00000463428 EIF2B2P49770 351 aaKnown RBP10.65□□□□□ -0.7
PHACTR4-203ENST00000463428 AP2S1P53680 142 aaPredicted RBP10.65□□□□□ -0.7
PHACTR4-203ENST00000463428 ZNF616Q08AN1 781 aa10.65□□□□□ -0.7
PHACTR4-203ENST00000463428 OR2F1Q13607 317 aa10.65□□□□□ -0.7
PHACTR4-203ENST00000463428 ZNF345Q14585 488 aa10.65□□□□□ -0.7
PHACTR4-203ENST00000463428 CLINT1Q14677 625 aa10.65□□□□□ -0.7
PHACTR4-203ENST00000463428 LGALSLQ3ZCW2 172 aaPredicted RBP10.65□□□□□ -0.7
PHACTR4-203ENST00000463428 TIGITQ495A1 244 aa10.65□□□□□ -0.7
PHACTR4-203ENST00000463428 KCNRGQ8N5I3 272 aa10.65□□□□□ -0.7
PHACTR4-203ENST00000463428 HYLS1Q96M11 299 aa10.65□□□□□ -0.7
PHACTR4-203ENST00000463428 TRGV9Q99603 122 aa10.65□□□□□ -0.7
PHACTR4-203ENST00000463428 ATP5SQ99766 215 aa10.65□□□□□ -0.7
PHACTR4-203ENST00000463428 SMCO3A2RU48 225 aa10.64□□□□□ -0.71
PHACTR4-203ENST00000463428 NUPL2O15504 423 aaKnown RBP10.64□□□□□ -0.71
PHACTR4-203ENST00000463428 PFDN1O60925 122 aa10.64□□□□□ -0.71
PHACTR4-203ENST00000463428 YPEL3P61236 119 aaPredicted RBP10.64□□□□□ -0.71
PHACTR4-203ENST00000463428 AKR1C1Q04828 323 aa10.64□□□□□ -0.71
PHACTR4-203ENST00000463428 KLF5Q13887 457 aaPredicted RBP10.64□□□□□ -0.71
PHACTR4-203ENST00000463428 ZFP69Q49AA0 526 aa10.64□□□□□ -0.71
PHACTR4-203ENST00000463428 TEPPQ6URK8 271 aa10.64□□□□□ -0.71
PHACTR4-203ENST00000463428 GPHB5Q86YW7 130 aa10.64□□□□□ -0.71
PHACTR4-203ENST00000463428 DPF1Q92782 380 aa10.64□□□□□ -0.71
PHACTR4-203ENST00000463428 ZFP92A6NM28 416 aa10.63□□□□□ -0.71
PHACTR4-203ENST00000463428 DFFBO76075 338 aa10.63□□□□□ -0.71
PHACTR4-203ENST00000463428 HOXD3P31249 432 aaPredicted RBP10.63□□□□□ -0.71
PHACTR4-203ENST00000463428 SLURP1P55000 103 aa10.63□□□□□ -0.71
PHACTR4-203ENST00000463428 ZNF90Q03938 601 aa10.63□□□□□ -0.71
PHACTR4-203ENST00000463428 TMEM182Q6ZP80 229 aaPredicted RBP10.63□□□□□ -0.71
PHACTR4-203ENST00000463428 MGST2Q99735 147 aa10.63□□□□□ -0.71
PHACTR4-203ENST00000463428 WDR61Q9GZS3 305 aaKnown RBP10.63□□□□□ -0.71
PHACTR4-203ENST00000463428 CYTL1Q9NRR1 136 aa10.63□□□□□ -0.71
PHACTR4-203ENST00000463428 IGHV3-35A0A0C4DH35 117 aa10.62□□□□□ -0.71
PHACTR4-203ENST00000463428 A0A0D9SG52 128 aa10.62□□□□□ -0.71
PHACTR4-203ENST00000463428 UBE2L5PA0A1B0GUS4 154 aa10.62□□□□□ -0.71
PHACTR4-203ENST00000463428 ZP3P21754 424 aa10.62□□□□□ -0.71
PHACTR4-203ENST00000463428 RPEL1Q2QD12 228 aa10.62□□□□□ -0.71
PHACTR4-203ENST00000463428 LAMTOR1Q6IAA8 161 aa10.62□□□□□ -0.71
PHACTR4-203ENST00000463428 BTNL8Q6UX41 500 aa10.62□□□□□ -0.71
PHACTR4-203ENST00000463428 ZNF600Q6ZNG1 722 aa10.62□□□□□ -0.71
PHACTR4-203ENST00000463428 OR4F17Q8NGA8 305 aa10.62□□□□□ -0.71
PHACTR4-203ENST00000463428 DLX4Q92988 240 aaPredicted RBP10.62□□□□□ -0.71
PHACTR4-203ENST00000463428 OR4F4Q96R69 305 aa10.62□□□□□ -0.71
PHACTR4-203ENST00000463428 PARD6GQ9BYG4 376 aaPredicted RBP10.62□□□□□ -0.71
PHACTR4-203ENST00000463428 SLC45A2Q9UMX9 530 aa10.62□□□□□ -0.71
PHACTR4-203ENST00000463428 NDUFA4O00483 81 aa10.61□□□□□ -0.71
PHACTR4-203ENST00000463428 AGPAT2O15120 278 aa10.61□□□□□ -0.71
PHACTR4-203ENST00000463428 TSPAN15O95858 294 aa10.61□□□□□ -0.71
PHACTR4-203ENST00000463428 TOMM40O96008 361 aa10.61□□□□□ -0.71
PHACTR4-203ENST00000463428 PSG1P11464 419 aa10.61□□□□□ -0.71
PHACTR4-203ENST00000463428 RELQ04864 619 aaPredicted RBP10.61□□□□□ -0.71
PHACTR4-203ENST00000463428 TOMM20LQ6UXN7 152 aa10.61□□□□□ -0.71
PHACTR4-203ENST00000463428 UNQ9165/PRO28630Q6UXU0 137 aa10.61□□□□□ -0.71
PHACTR4-203ENST00000463428 CYP2G1PQ6ZSU1 146 aa10.61□□□□□ -0.71
PHACTR4-203ENST00000463428 C9orf62Q8N4C0 152 aa10.61□□□□□ -0.71
PHACTR4-203ENST00000463428 SPATA3Q8NHX4 192 aa10.61□□□□□ -0.71
PHACTR4-203ENST00000463428 RCC1LQ96I51 464 aaKnown RBP10.61□□□□□ -0.71
PHACTR4-203ENST00000463428 ZFAND3Q9H8U3 227 aa10.61□□□□□ -0.71
PHACTR4-203ENST00000463428 PUS1Q9Y606 427 aaKnown RBP eCLIP10.61□□□□□ -0.71
PHACTR4-203ENST00000463428 LGALS9O00182 355 aa10.6□□□□□ -0.71
PHACTR4-203ENST00000463428 TAAR5O14804 337 aa10.6□□□□□ -0.71
PHACTR4-203ENST00000463428 MPDU1O75352 247 aa10.6□□□□□ -0.71
PHACTR4-203ENST00000463428 SCGB2A1O75556 95 aa10.6□□□□□ -0.71
PHACTR4-203ENST00000463428 RD3LP0DJH9 198 aa10.6□□□□□ -0.71
PHACTR4-203ENST00000463428 FGF7P21781 194 aa10.6□□□□□ -0.71
PHACTR4-203ENST00000463428 GATA2P23769 480 aaPredicted RBP10.6□□□□□ -0.71
PHACTR4-203ENST00000463428 RPL7L1Q6DKI1 246 aaKnown RBP10.6□□□□□ -0.71
PHACTR4-203ENST00000463428 TMUB2Q71RG4 321 aa10.6□□□□□ -0.71
PHACTR4-203ENST00000463428 REC114Q7Z4M0 266 aa10.6□□□□□ -0.71
PHACTR4-203ENST00000463428 C1QL4Q86Z23 238 aa10.6□□□□□ -0.71
PHACTR4-203ENST00000463428 LINC00482Q8N8I6 264 aa10.6□□□□□ -0.71
PHACTR4-203ENST00000463428 Q8WTZ3 238 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms