RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 ZNF137PP52743 207 aa13.62□□□□□ -0.23
ACTB-207ENST00000462494 PAFAH1B2P68402 229 aa13.62□□□□□ -0.23
ACTB-207ENST00000462494 TNXAQ16473 311 aa13.62□□□□□ -0.23
ACTB-207ENST00000462494 Q6ZWC4 215 aa13.62□□□□□ -0.23
ACTB-207ENST00000462494 OR1B1Q8NGR6 318 aa13.62□□□□□ -0.23
ACTB-207ENST00000462494 HSPB9Q9BQS6 159 aa13.62□□□□□ -0.23
ACTB-207ENST00000462494 SSBP3Q9BWW4 388 aaPredicted RBP13.62□□□□□ -0.23
ACTB-207ENST00000462494 CDC42EP3Q9UKI2 254 aa13.62□□□□□ -0.23
ACTB-207ENST00000462494 LGALS7P47929 136 aa13.62□□□□□ -0.23
ACTB-207ENST00000462494 RANP62826 216 aaKnown RBP13.62□□□□□ -0.23
ACTB-207ENST00000462494 WDR73Q6P4I2 378 aa13.62□□□□□ -0.23
ACTB-207ENST00000462494 SSX8Q7RTT4 187 aa13.62□□□□□ -0.23
ACTB-207ENST00000462494 ZNF329Q86UD4 541 aa13.62□□□□□ -0.23
ACTB-207ENST00000462494 C11orf42Q8N5U0 333 aa13.62□□□□□ -0.23
ACTB-207ENST00000462494 THAP8Q8NA92 274 aa13.62□□□□□ -0.23
ACTB-207ENST00000462494 TBX15Q96SF7 602 aa13.62□□□□□ -0.23
ACTB-207ENST00000462494 TNFRSF19Q9NS68 423 aa13.62□□□□□ -0.23
ACTB-207ENST00000462494 POLEQ07864 2286 aa13.61□□□□□ -0.23
ACTB-207ENST00000462494 PTPRZ1P23471 2315 aaPredicted RBP13.61□□□□□ -0.23
ACTB-207ENST00000462494 MRGPRG-AS1Q2M3A8 158 aa13.61□□□□□ -0.23
ACTB-207ENST00000462494 TMEM136Q6ZRR5 245 aa13.61□□□□□ -0.23
ACTB-207ENST00000462494 BLNKQ8WV28 456 aa13.61□□□□□ -0.23
ACTB-207ENST00000462494 FAM168AQ92567 244 aa13.61□□□□□ -0.23
ACTB-207ENST00000462494 GNB4Q9HAV0 340 aa13.61□□□□□ -0.23
ACTB-207ENST00000462494 C22orf46C9J442 243 aa13.6□□□□□ -0.23
ACTB-207ENST00000462494 PEX7O00628 323 aa13.6□□□□□ -0.23
ACTB-207ENST00000462494 APOBEC3AP31941 199 aaPredicted RBP13.6□□□□□ -0.23
ACTB-207ENST00000462494 TAS2R60P59551 318 aa13.6□□□□□ -0.23
ACTB-207ENST00000462494 TBR1Q16650 682 aa13.6□□□□□ -0.23
ACTB-207ENST00000462494 TOMM20LQ6UXN7 152 aa13.6□□□□□ -0.23
ACTB-207ENST00000462494 FXYD5Q96DB9 178 aa13.6□□□□□ -0.23
ACTB-207ENST00000462494 SMIM27A0A1W2PRY6 76 aa13.6□□□□□ -0.23
ACTB-207ENST00000462494 IGLC7A0M8Q6 106 aa13.6□□□□□ -0.23
ACTB-207ENST00000462494 MT-ND6P03923 174 aa13.6□□□□□ -0.23
ACTB-207ENST00000462494 GNG5P63218 68 aa13.6□□□□□ -0.23
ACTB-207ENST00000462494 Q0VG73 95 aa13.6□□□□□ -0.23
ACTB-207ENST00000462494 PRR27Q6MZM9 219 aa13.6□□□□□ -0.23
ACTB-207ENST00000462494 ZNF600Q6ZNG1 722 aa13.6□□□□□ -0.23
ACTB-207ENST00000462494 SPACA3Q8IXA5 215 aa13.6□□□□□ -0.23
ACTB-207ENST00000462494 FAM103A1Q9BTL3 118 aaKnown RBP13.6□□□□□ -0.23
ACTB-207ENST00000462494 IGHV2-26A0A0B4J1V2 119 aa13.59□□□□□ -0.23
ACTB-207ENST00000462494 AMY1AP04745 511 aa13.59□□□□□ -0.23
ACTB-207ENST00000462494 RPL27AP46776 148 aaKnown RBP13.59□□□□□ -0.23
ACTB-207ENST00000462494 MFAP2P55001 183 aa13.59□□□□□ -0.23
ACTB-207ENST00000462494 FOXC1Q12948 553 aa13.59□□□□□ -0.23
ACTB-207ENST00000462494 ETFRF1Q6IPR1 90 aa13.59□□□□□ -0.23
ACTB-207ENST00000462494 SGK494Q96LW2 274 aa13.59□□□□□ -0.23
ACTB-207ENST00000462494 RALYQ9UKM9 306 aaKnown RBP13.59□□□□□ -0.23
ACTB-207ENST00000462494 RPH3ALQ9UNE2 315 aa13.59□□□□□ -0.23
ACTB-207ENST00000462494 INSIG2Q9Y5U4 225 aa13.59□□□□□ -0.23
ACTB-207ENST00000462494 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.59□□□□□ -0.23
ACTB-207ENST00000462494 FSTL3O95633 263 aa13.59□□□□□ -0.23
ACTB-207ENST00000462494 CD3EP07766 207 aa13.59□□□□□ -0.23
ACTB-207ENST00000462494 ESDP10768 282 aa13.59□□□□□ -0.23
ACTB-207ENST00000462494 C1orf194Q5T5A4 169 aa13.59□□□□□ -0.23
ACTB-207ENST00000462494 BEND2Q8NDZ0 799 aa13.59□□□□□ -0.23
ACTB-207ENST00000462494 RNF224P0DH78 156 aa13.58□□□□□ -0.24
ACTB-207ENST00000462494 CDKN1AP38936 164 aa13.58□□□□□ -0.24
ACTB-207ENST00000462494 RBPJQ06330 500 aa13.58□□□□□ -0.24
ACTB-207ENST00000462494 TEX45Q8NA69 505 aa13.58□□□□□ -0.24
ACTB-207ENST00000462494 LINC01560Q8TB33 94 aa13.58□□□□□ -0.24
ACTB-207ENST00000462494 C22orf15Q8WYQ4 148 aa13.58□□□□□ -0.24
ACTB-207ENST00000462494 CBLN4Q9NTU7 201 aa13.58□□□□□ -0.24
ACTB-207ENST00000462494 B9A039 149 aa13.58□□□□□ -0.24
ACTB-207ENST00000462494 COX7A1P24310 79 aa13.58□□□□□ -0.24
ACTB-207ENST00000462494 PRRX1P54821 245 aa13.58□□□□□ -0.24
ACTB-207ENST00000462494 SIGLECL1Q8N7X8 197 aa13.58□□□□□ -0.24
ACTB-207ENST00000462494 PERPQ96FX8 193 aa13.58□□□□□ -0.24
ACTB-207ENST00000462494 MUC6Q6W4X9 2439 aa13.57□□□□□ -0.24
ACTB-207ENST00000462494 IZUMO1RA6ND01 250 aa13.57□□□□□ -0.24
ACTB-207ENST00000462494 SLC25A5P05141 298 aaKnown RBP13.57□□□□□ -0.24
ACTB-207ENST00000462494 SRIP30626 198 aa13.57□□□□□ -0.24
ACTB-207ENST00000462494 NBL1P41271 181 aa13.57□□□□□ -0.24
ACTB-207ENST00000462494 GSX1Q9H4S2 264 aaPredicted RBP13.57□□□□□ -0.24
ACTB-207ENST00000462494 ZNF331Q9NQX6 463 aaPredicted RBP13.57□□□□□ -0.24
ACTB-207ENST00000462494 SIGLEC9Q9Y336 463 aa13.57□□□□□ -0.24
ACTB-207ENST00000462494 IGHV1-3A0A0C4DH29 117 aa13.56□□□□□ -0.24
ACTB-207ENST00000462494 ZNF253O75346 499 aa13.56□□□□□ -0.24
ACTB-207ENST00000462494 FAM87AP0C7U9 286 aa13.56□□□□□ -0.24
ACTB-207ENST00000462494 BRS3P32247 399 aa13.56□□□□□ -0.24
ACTB-207ENST00000462494 UBE2G1P62253 170 aa13.56□□□□□ -0.24
ACTB-207ENST00000462494 TDRG1Q3Y452 100 aa13.56□□□□□ -0.24
ACTB-207ENST00000462494 VN1R17PQ8TDU5 208 aa13.56□□□□□ -0.24
ACTB-207ENST00000462494 PGPA6NDG6 321 aa13.56□□□□□ -0.24
ACTB-207ENST00000462494 H3BTX0 84 aa13.56□□□□□ -0.24
ACTB-207ENST00000462494 HLA-DQA1P01909 254 aa13.56□□□□□ -0.24
ACTB-207ENST00000462494 APCSP02743 223 aa13.56□□□□□ -0.24
ACTB-207ENST00000462494 COX19Q49B96 90 aa13.56□□□□□ -0.24
ACTB-207ENST00000462494 LEMD1Q68G75 181 aa13.56□□□□□ -0.24
ACTB-207ENST00000462494 NUDT10Q8NFP7 164 aa13.56□□□□□ -0.24
ACTB-207ENST00000462494 NUDT11Q96G61 164 aa13.56□□□□□ -0.24
ACTB-207ENST00000462494 RCHY1Q96PM5 261 aa13.56□□□□□ -0.24
ACTB-207ENST00000462494 C2orf88Q9BSF0 95 aa13.56□□□□□ -0.24
ACTB-207ENST00000462494 MALRD1Q5VYJ5 2156 aa13.56□□□□□ -0.24
ACTB-207ENST00000462494 TACC2O95359 2948 aa13.56□□□□□ -0.24
ACTB-207ENST00000462494 BUB1B-PAK6H3BSN5 160 aa13.55□□□□□ -0.24
ACTB-207ENST00000462494 BMPR1BO00238 502 aa13.55□□□□□ -0.24
ACTB-207ENST00000462494 EREGO14944 169 aa13.55□□□□□ -0.24
ACTB-207ENST00000462494 IGLV1-47P01700 117 aa13.55□□□□□ -0.24
ACTB-207ENST00000462494 CRYGCP07315 174 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms