RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 TBX15Q96SF7 602 aa10.02□□□□□ -0.8
COL4A6-204ENST00000461897 SLC25A33Q9BSK2 321 aa10.02□□□□□ -0.8
COL4A6-204ENST00000461897 MYO18BQ8IUG5 2567 aa10.02□□□□□ -0.81
COL4A6-204ENST00000461897 UBR5O95071 2799 aaPredicted RBP10.02□□□□□ -0.81
COL4A6-204ENST00000461897 SNURFLB1AK76 121 aa10.02□□□□□ -0.81
COL4A6-204ENST00000461897 GGTLC3B5MD39 225 aa10.02□□□□□ -0.81
COL4A6-204ENST00000461897 M0QZK8 103 aa10.02□□□□□ -0.81
COL4A6-204ENST00000461897 C8orf88P0DMB2 117 aa10.02□□□□□ -0.81
COL4A6-204ENST00000461897 IER3P46695 156 aa10.02□□□□□ -0.81
COL4A6-204ENST00000461897 TIGITQ495A1 244 aa10.02□□□□□ -0.81
COL4A6-204ENST00000461897 C11orf42Q8N5U0 333 aa10.02□□□□□ -0.81
COL4A6-204ENST00000461897 OR5AU1Q8NGC0 362 aa10.02□□□□□ -0.81
COL4A6-204ENST00000461897 OSR1Q8TAX0 266 aaPredicted RBP10.02□□□□□ -0.81
COL4A6-204ENST00000461897 SPTAN1Q13813 2472 aaKnown RBP10.01□□□□□ -0.81
COL4A6-204ENST00000461897 SMIM27A0A1W2PRY6 76 aa10.01□□□□□ -0.81
COL4A6-204ENST00000461897 TCAPO15273 167 aa10.01□□□□□ -0.81
COL4A6-204ENST00000461897 ACTL6BO94805 426 aa10.01□□□□□ -0.81
COL4A6-204ENST00000461897 IGKV1-16P04430 117 aa10.01□□□□□ -0.81
COL4A6-204ENST00000461897 OR5I1Q13606 314 aa10.01□□□□□ -0.81
COL4A6-204ENST00000461897 TMEM136Q6ZRR5 245 aa10.01□□□□□ -0.81
COL4A6-204ENST00000461897 OR8I2Q8N0Y5 310 aa10.01□□□□□ -0.81
COL4A6-204ENST00000461897 TIMD4Q96H15 378 aa10.01□□□□□ -0.81
COL4A6-204ENST00000461897 FAM167A-AS1Q96KT0 104 aa10.01□□□□□ -0.81
COL4A6-204ENST00000461897 NDUFA4L2Q9NRX3 87 aa10.01□□□□□ -0.81
COL4A6-204ENST00000461897 ZNF705FA8MVS1 300 aaPredicted RBP10□□□□□ -0.81
COL4A6-204ENST00000461897 REG1AP05451 166 aa10□□□□□ -0.81
COL4A6-204ENST00000461897 ZNF705DP0CH99 300 aaPredicted RBP10□□□□□ -0.81
COL4A6-204ENST00000461897 ZNF705BP0CI00 300 aaPredicted RBP10□□□□□ -0.81
COL4A6-204ENST00000461897 SAA1P0DJI8 122 aaPredicted RBP10□□□□□ -0.81
COL4A6-204ENST00000461897 COMPP49747 757 aaPredicted RBP10□□□□□ -0.81
COL4A6-204ENST00000461897 MOB3BQ86TA1 216 aa10□□□□□ -0.81
COL4A6-204ENST00000461897 HSPB9Q9BQS6 159 aa10□□□□□ -0.81
COL4A6-204ENST00000461897 HINT2Q9BX68 163 aa10□□□□□ -0.81
COL4A6-204ENST00000461897 COMMD5Q9GZQ3 224 aa10□□□□□ -0.81
COL4A6-204ENST00000461897 UTP20O75691 2785 aaKnown RBP10□□□□□ -0.81
COL4A6-204ENST00000461897 HLA-DQA1P01909 254 aa10□□□□□ -0.81
COL4A6-204ENST00000461897 IGHV1-8P0DP01 117 aa10□□□□□ -0.81
COL4A6-204ENST00000461897 BRS3P32247 399 aa10□□□□□ -0.81
COL4A6-204ENST00000461897 TMEM183BQ1AE95 376 aa10□□□□□ -0.81
COL4A6-204ENST00000461897 TMEM177Q53S58 311 aa10□□□□□ -0.81
COL4A6-204ENST00000461897 CRYBG3Q68DQ2 2970 aa10□□□□□ -0.81
COL4A6-204ENST00000461897 FAM71F2Q6NXP2 309 aa10□□□□□ -0.81
COL4A6-204ENST00000461897 RASL11AQ6T310 242 aa10□□□□□ -0.81
COL4A6-204ENST00000461897 TOMM20LQ6UXN7 152 aa10□□□□□ -0.81
COL4A6-204ENST00000461897 BAGE3Q86Y29 109 aa10□□□□□ -0.81
COL4A6-204ENST00000461897 BAGE2Q86Y30 109 aa10□□□□□ -0.81
COL4A6-204ENST00000461897 OR8B3Q8NGG8 313 aa10□□□□□ -0.81
COL4A6-204ENST00000461897 OR5AN1Q8NGI8 311 aa10□□□□□ -0.81
COL4A6-204ENST00000461897 OR4A5Q8NH83 315 aa10□□□□□ -0.81
COL4A6-204ENST00000461897 ZNF596Q8TC21 504 aa10□□□□□ -0.81
COL4A6-204ENST00000461897 OR8B2Q96RD0 313 aa10□□□□□ -0.81
COL4A6-204ENST00000461897 MIEN1Q9BRT3 115 aa10□□□□□ -0.81
COL4A6-204ENST00000461897 GNB4Q9HAV0 340 aa10□□□□□ -0.81
COL4A6-204ENST00000461897 CDC42EP3Q9UKI2 254 aa10□□□□□ -0.81
COL4A6-204ENST00000461897 OR7C2O60412 319 aa9.99□□□□□ -0.81
COL4A6-204ENST00000461897 GPX1P07203 203 aa9.99□□□□□ -0.81
COL4A6-204ENST00000461897 FRMD6-AS1P0C7T7 363 aa9.99□□□□□ -0.81
COL4A6-204ENST00000461897 FAM231DQ6ZW35 169 aa9.99□□□□□ -0.81
COL4A6-204ENST00000461897 C8orf31Q8N9H6 132 aa9.99□□□□□ -0.81
COL4A6-204ENST00000461897 C8orf46Q8TAG6 207 aa9.99□□□□□ -0.81
COL4A6-204ENST00000461897 WIPF2Q8TF74 440 aaPredicted RBP9.99□□□□□ -0.81
COL4A6-204ENST00000461897 VPS13CQ709C8 3753 aa9.99□□□□□ -0.81
COL4A6-204ENST00000461897 TNCP24821 2201 aa9.99□□□□□ -0.81
COL4A6-204ENST00000461897 AKAP6Q13023 2319 aa9.99□□□□□ -0.81
COL4A6-204ENST00000461897 C22orf46C9J442 243 aa9.98□□□□□ -0.81
COL4A6-204ENST00000461897 F2Z2F3 143 aa9.98□□□□□ -0.81
COL4A6-204ENST00000461897 H0YJW9 148 aa9.98□□□□□ -0.81
COL4A6-204ENST00000461897 OVOL3O00110 214 aa9.98□□□□□ -0.81
COL4A6-204ENST00000461897 AMY1AP04745 511 aa9.98□□□□□ -0.81
COL4A6-204ENST00000461897 DLX1P56177 255 aa9.98□□□□□ -0.81
COL4A6-204ENST00000461897 LINC00311Q8N616 119 aa9.98□□□□□ -0.81
COL4A6-204ENST00000461897 Q8N976 141 aa9.98□□□□□ -0.81
COL4A6-204ENST00000461897 OR9G1Q8NH87 305 aa9.98□□□□□ -0.81
COL4A6-204ENST00000461897 IGFBPL1Q8WX77 278 aa9.98□□□□□ -0.81
COL4A6-204ENST00000461897 MBD6Q96DN6 1003 aa9.98□□□□□ -0.81
COL4A6-204ENST00000461897 SLC25A2Q9BXI2 301 aa9.98□□□□□ -0.81
COL4A6-204ENST00000461897 NAT8BQ9UHF3 227 aa9.98□□□□□ -0.81
COL4A6-204ENST00000461897 PPIAL4CA0A0B4J2A2 164 aa9.98□□□□□ -0.81
COL4A6-204ENST00000461897 A0A1W2PN81 502 aa9.98□□□□□ -0.81
COL4A6-204ENST00000461897 IZUMO1RA6ND01 250 aa9.98□□□□□ -0.81
COL4A6-204ENST00000461897 GOSR1O95249 250 aa9.98□□□□□ -0.81
COL4A6-204ENST00000461897 APOA2P02652 100 aa9.98□□□□□ -0.81
COL4A6-204ENST00000461897 PPIAL4GP0DN37 164 aa9.98□□□□□ -0.81
COL4A6-204ENST00000461897 USF1P22415 310 aaPredicted RBP9.98□□□□□ -0.81
COL4A6-204ENST00000461897 EFNA4P52798 201 aa9.98□□□□□ -0.81
COL4A6-204ENST00000461897 SUMO1P63165 101 aaKnown RBP9.98□□□□□ -0.81
COL4A6-204ENST00000461897 ERHP84090 104 aaKnown RBP9.98□□□□□ -0.81
COL4A6-204ENST00000461897 SRSF1Q07955 248 aaKnown RBP eCLIP9.98□□□□□ -0.81
COL4A6-204ENST00000461897 IBA57Q5T440 356 aaKnown RBP9.98□□□□□ -0.81
COL4A6-204ENST00000461897 TMEM167AQ8TBQ9 72 aa9.98□□□□□ -0.81
COL4A6-204ENST00000461897 KCNS1Q96KK3 526 aa9.98□□□□□ -0.81
COL4A6-204ENST00000461897 RNASE7Q9H1E1 156 aaKnown RBP9.98□□□□□ -0.81
COL4A6-204ENST00000461897 TMEM133Q9H2Q1 129 aa9.98□□□□□ -0.81
COL4A6-204ENST00000461897 DNAJC4Q9NNZ3 241 aa9.98□□□□□ -0.81
COL4A6-204ENST00000461897 FOSL1P15407 271 aa9.97□□□□□ -0.81
COL4A6-204ENST00000461897 GATA2P23769 480 aaPredicted RBP9.97□□□□□ -0.81
COL4A6-204ENST00000461897 RPL8P62917 257 aaKnown RBP9.97□□□□□ -0.81
COL4A6-204ENST00000461897 ZNF124Q15973 351 aa9.97□□□□□ -0.81
COL4A6-204ENST00000461897 SIGLECL1Q8N7X8 197 aa9.97□□□□□ -0.81
COL4A6-204ENST00000461897 THAP8Q8NA92 274 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms