RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 GLI3P10071 1580 aa1.25□□□□□ -2.21
VCL-203ENST00000461383 NEO1Q92859 1461 aa1.24□□□□□ -2.21
VCL-203ENST00000461383 TONSLQ96HA7 1378 aa1.24□□□□□ -2.21
VCL-203ENST00000461383 SCN3AQ9NY46 2000 aa1.24□□□□□ -2.21
VCL-203ENST00000461383 IGKV1D-42A0A075B6H8 117 aa1.24□□□□□ -2.21
VCL-203ENST00000461383 SULT1B1O43704 296 aa1.24□□□□□ -2.21
VCL-203ENST00000461383 CLPSP04118 112 aa1.24□□□□□ -2.21
VCL-203ENST00000461383 OR4E1P0C645 316 aa1.24□□□□□ -2.21
VCL-203ENST00000461383 FKBP2P26885 142 aaKnown RBP1.24□□□□□ -2.21
VCL-203ENST00000461383 SRP14P37108 136 aaKnown RBP1.24□□□□□ -2.21
VCL-203ENST00000461383 EIF5AP63241 154 aaKnown RBP1.24□□□□□ -2.21
VCL-203ENST00000461383 LINC01554Q52M75 96 aa1.24□□□□□ -2.21
VCL-203ENST00000461383 Q6ZQT0 140 aa1.24□□□□□ -2.21
VCL-203ENST00000461383 GOLT1AQ6ZVE7 132 aa1.24□□□□□ -2.21
VCL-203ENST00000461383 LCA10Q71F78 164 aa1.24□□□□□ -2.21
VCL-203ENST00000461383 PHF13Q86YI8 300 aaPredicted RBP1.24□□□□□ -2.21
VCL-203ENST00000461383 C12orf45Q8N5I9 185 aaPredicted RBP1.24□□□□□ -2.21
VCL-203ENST00000461383 C9orf163Q8N9P6 203 aa1.24□□□□□ -2.21
VCL-203ENST00000461383 HIST1H2BLQ99880 126 aa1.24□□□□□ -2.21
VCL-203ENST00000461383 SLC50A1Q9BRV3 221 aa1.24□□□□□ -2.21
VCL-203ENST00000461383 MIXL1Q9H2W2 232 aa1.24□□□□□ -2.21
VCL-203ENST00000461383 PARVBQ9HBI1 364 aa1.24□□□□□ -2.21
VCL-203ENST00000461383 NHP2Q9NX24 153 aaKnown RBP1.24□□□□□ -2.21
VCL-203ENST00000461383 OR5AC2Q9NZP5 309 aa1.24□□□□□ -2.21
VCL-203ENST00000461383 SLC35A3Q9Y2D2 325 aa1.24□□□□□ -2.21
VCL-203ENST00000461383 SMARCA4P51532 1647 aa1.24□□□□□ -2.21
VCL-203ENST00000461383 DENND4CQ5VZ89 1909 aa1.24□□□□□ -2.21
VCL-203ENST00000461383 MYH2Q9UKX2 1941 aa1.24□□□□□ -2.21
VCL-203ENST00000461383 TAF1LQ8IZX4 1826 aa1.24□□□□□ -2.21
VCL-203ENST00000461383 SETD5Q9C0A6 1442 aa1.23□□□□□ -2.21
VCL-203ENST00000461383 CST8O60676 142 aa1.23□□□□□ -2.21
VCL-203ENST00000461383 IFNA7P01567 189 aa1.23□□□□□ -2.21
VCL-203ENST00000461383 SHBGP04278 402 aa1.23□□□□□ -2.21
VCL-203ENST00000461383 MGST1P10620 155 aaKnown RBP1.23□□□□□ -2.21
VCL-203ENST00000461383 PIGPP57054 158 aa1.23□□□□□ -2.21
VCL-203ENST00000461383 RPL19P84098 196 aaKnown RBP1.23□□□□□ -2.21
VCL-203ENST00000461383 ZNF846Q147U1 533 aa1.23□□□□□ -2.21
VCL-203ENST00000461383 KRTAP21-2Q3LI59 83 aa1.23□□□□□ -2.21
VCL-203ENST00000461383 ZNF826PQ6ZT77 177 aa1.23□□□□□ -2.21
VCL-203ENST00000461383 DEFB119Q8N690 84 aa1.23□□□□□ -2.21
VCL-203ENST00000461383 TAS2R4Q9NYW5 299 aa1.23□□□□□ -2.21
VCL-203ENST00000461383 EPDR1Q9UM22 224 aa1.23□□□□□ -2.21
VCL-203ENST00000461383 UTP11Q9Y3A2 253 aaKnown RBP1.23□□□□□ -2.21
VCL-203ENST00000461383 DIDO1Q9BTC0 2240 aaKnown RBP1.22□□□□□ -2.21
VCL-203ENST00000461383 DOCK4Q8N1I0 1966 aa1.22□□□□□ -2.21
VCL-203ENST00000461383 TRBV19A0A075B6N1 114 aa1.22□□□□□ -2.21
VCL-203ENST00000461383 TRAV4A0A0B4J268 109 aa1.22□□□□□ -2.21
VCL-203ENST00000461383 C7orf71A4D174 169 aa1.22□□□□□ -2.21
VCL-203ENST00000461383 G3V2T6 193 aa1.22□□□□□ -2.21
VCL-203ENST00000461383 C19orf84I3L1E1 186 aa1.22□□□□□ -2.21
VCL-203ENST00000461383 ATG12O94817 140 aa1.22□□□□□ -2.21
VCL-203ENST00000461383 PROSCO94903 275 aa1.22□□□□□ -2.21
VCL-203ENST00000461383 CTSDP07339 412 aaPredicted RBP1.22□□□□□ -2.21
VCL-203ENST00000461383 ASAH2BP0C7U1 165 aa1.22□□□□□ -2.21
VCL-203ENST00000461383 HSPE1P61604 102 aaKnown RBP1.22□□□□□ -2.21
VCL-203ENST00000461383 KRR1Q13601 381 aaKnown RBP1.22□□□□□ -2.21
VCL-203ENST00000461383 CDK5R1Q15078 307 aa1.22□□□□□ -2.21
VCL-203ENST00000461383 TMED4Q7Z7H5 227 aa1.22□□□□□ -2.21
VCL-203ENST00000461383 AQP3Q92482 292 aa1.22□□□□□ -2.21
VCL-203ENST00000461383 AP3S1Q92572 193 aa1.22□□□□□ -2.21
VCL-203ENST00000461383 ADAT1Q9BUB4 502 aaKnown RBP1.22□□□□□ -2.21
VCL-203ENST00000461383 IMUPQ9GZP8 106 aa1.22□□□□□ -2.21
VCL-203ENST00000461383 COL4A1P02462 1669 aa1.22□□□□□ -2.21
VCL-203ENST00000461383 CAMSAP1Q5T5Y3 1602 aa1.22□□□□□ -2.21
VCL-203ENST00000461383 MYH3P11055 1940 aa1.21□□□□□ -2.22
VCL-203ENST00000461383 TRAV3A0A0B4J244 114 aa1.21□□□□□ -2.22
VCL-203ENST00000461383 TRAV1-1A0A0B4J248 108 aa1.21□□□□□ -2.22
VCL-203ENST00000461383 IGKV3D-7A0A0C4DH55 119 aa1.21□□□□□ -2.22
VCL-203ENST00000461383 IGKV3OR2-268A0A0C4DH90 116 aa1.21□□□□□ -2.22
VCL-203ENST00000461383 BANF1O75531 89 aa1.21□□□□□ -2.22
VCL-203ENST00000461383 UBL3O95164 117 aa1.21□□□□□ -2.22
VCL-203ENST00000461383 NDUFC2O95298 119 aa1.21□□□□□ -2.22
VCL-203ENST00000461383 BAALC-AS2P0C853 105 aa1.21□□□□□ -2.22
VCL-203ENST00000461383 BRS3P32247 399 aa1.21□□□□□ -2.22
VCL-203ENST00000461383 ATP5G3P48201 142 aa1.21□□□□□ -2.22
VCL-203ENST00000461383 NCALDP61601 193 aa1.21□□□□□ -2.22
VCL-203ENST00000461383 TSNQ15631 228 aaKnown RBP1.21□□□□□ -2.22
VCL-203ENST00000461383 RNASE10Q5GAN6 216 aaKnown RBP1.21□□□□□ -2.22
VCL-203ENST00000461383 BCL2L15Q5TBC7 163 aa1.21□□□□□ -2.22
VCL-203ENST00000461383 DHRS4L2Q6PKH6 230 aa1.21□□□□□ -2.22
VCL-203ENST00000461383 C12orf29Q8N999 325 aa1.21□□□□□ -2.22
VCL-203ENST00000461383 OR13D1Q8NGV5 346 aa1.21□□□□□ -2.22
VCL-203ENST00000461383 OR2T10Q8NGZ9 312 aa1.21□□□□□ -2.22
VCL-203ENST00000461383 WFDC5Q8TCV5 224 aa1.21□□□□□ -2.22
VCL-203ENST00000461383 RNF122Q9H9V4 155 aa1.21□□□□□ -2.22
VCL-203ENST00000461383 PYCARDQ9ULZ3 195 aa1.21□□□□□ -2.22
VCL-203ENST00000461383 FMN1Q68DA7 1419 aa1.21□□□□□ -2.22
VCL-203ENST00000461383 EXPH5Q8NEV8 1989 aa1.21□□□□□ -2.22
VCL-203ENST00000461383 STRCQ7RTU9 1775 aa1.21□□□□□ -2.22
VCL-203ENST00000461383 MED1Q15648 1581 aaPredicted RBP1.21□□□□□ -2.22
VCL-203ENST00000461383 SBF1O95248 1867 aa1.2□□□□□ -2.22
VCL-203ENST00000461383 IGKV2-40A0A087WW87 121 aaPredicted RBP1.2□□□□□ -2.22
VCL-203ENST00000461383 IGKV2D-40P01614 121 aaPredicted RBP1.2□□□□□ -2.22
VCL-203ENST00000461383 IL9P15248 144 aa1.2□□□□□ -2.22
VCL-203ENST00000461383 SRIP30626 198 aa1.2□□□□□ -2.22
VCL-203ENST00000461383 SURF2Q15527 256 aaPredicted RBP1.2□□□□□ -2.22
VCL-203ENST00000461383 RRN3P1Q2M238 152 aa1.2□□□□□ -2.22
VCL-203ENST00000461383 BRMS1LQ5PSV4 323 aa1.2□□□□□ -2.22
VCL-203ENST00000461383 AKR1C8PQ5T2L2 129 aa1.2□□□□□ -2.22
VCL-203ENST00000461383 LINC00311Q8N616 119 aa1.2□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms