RNA–Protein interactions for RNA: ENST00000461228.1

DNMT3A-207, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-207ENST00000461228 CACFD1Q9UGQ2 172 aa10.43□□□□□ -0.74
DNMT3A-207ENST00000461228 HLA-DRB4X5D2U9 266 aa10.43□□□□□ -0.74
DNMT3A-207ENST00000461228 KNCNA6PVL3 124 aa10.42□□□□□ -0.74
DNMT3A-207ENST00000461228 FAM90A26D6RGX4 464 aa10.42□□□□□ -0.74
DNMT3A-207ENST00000461228 HNRNPCP07910 306 aaKnown RBP eCLIP10.42□□□□□ -0.741e-7■■□□□ 12.9
DNMT3A-207ENST00000461228 HTR2BP41595 481 aa10.42□□□□□ -0.74
DNMT3A-207ENST00000461228 NKX2-1P43699 371 aaPredicted RBP10.42□□□□□ -0.74
DNMT3A-207ENST00000461228 DHRS2Q13268 280 aa10.42□□□□□ -0.74
DNMT3A-207ENST00000461228 RNASEH2CQ8TDP1 164 aaKnown RBP10.42□□□□□ -0.74
DNMT3A-207ENST00000461228 RAB40CQ96S21 281 aa10.42□□□□□ -0.74
DNMT3A-207ENST00000461228 H3BMM0 161 aa10.41□□□□□ -0.74
DNMT3A-207ENST00000461228 IFNA17P01571 189 aa10.41□□□□□ -0.74
DNMT3A-207ENST00000461228 SPART-AS1P0CW21 52 aa10.41□□□□□ -0.74
DNMT3A-207ENST00000461228 UCP1P25874 307 aa10.41□□□□□ -0.74
DNMT3A-207ENST00000461228 HLA-DMAP28067 261 aa10.41□□□□□ -0.74
DNMT3A-207ENST00000461228 PSMG4Q5JS54 123 aa10.41□□□□□ -0.74
DNMT3A-207ENST00000461228 Q6ZRM9 215 aa10.41□□□□□ -0.74
DNMT3A-207ENST00000461228 NDUFA13Q9P0J0 144 aa10.41□□□□□ -0.74
DNMT3A-207ENST00000461228 MRPL36Q9P0J6 103 aaKnown RBP10.41□□□□□ -0.74
DNMT3A-207ENST00000461228 CDK2AP2O75956 126 aa10.4□□□□□ -0.74
DNMT3A-207ENST00000461228 ALDH3B2P48448 385 aa10.4□□□□□ -0.74
DNMT3A-207ENST00000461228 SPCS3P61009 180 aa10.4□□□□□ -0.74
DNMT3A-207ENST00000461228 C2orf83Q53S99 150 aa10.4□□□□□ -0.74
DNMT3A-207ENST00000461228 SAMD13Q5VXD3 122 aa10.4□□□□□ -0.74
DNMT3A-207ENST00000461228 SPATA31B1PQ5VZV4 182 aa10.4□□□□□ -0.74
DNMT3A-207ENST00000461228 TMEM230Q96A57 120 aa10.4□□□□□ -0.74
DNMT3A-207ENST00000461228 TP53RKQ96S44 253 aa10.4□□□□□ -0.74
DNMT3A-207ENST00000461228 ENY2Q9NPA8 101 aa10.4□□□□□ -0.74
DNMT3A-207ENST00000461228 CLEC5AQ9NY25 188 aa10.4□□□□□ -0.74
DNMT3A-207ENST00000461228 BUB3O43684 328 aa10.39□□□□□ -0.75
DNMT3A-207ENST00000461228 PPP5CP53041 499 aa10.39□□□□□ -0.75
DNMT3A-207ENST00000461228 PIGPP57054 158 aa10.39□□□□□ -0.75
DNMT3A-207ENST00000461228 SIGLEC15Q6ZMC9 328 aa10.39□□□□□ -0.75
DNMT3A-207ENST00000461228 CCDC71LQ8N9Z2 235 aa10.39□□□□□ -0.75
DNMT3A-207ENST00000461228 Q8WTZ3 238 aa10.39□□□□□ -0.75
DNMT3A-207ENST00000461228 ABHD1Q96SE0 405 aa10.39□□□□□ -0.75
DNMT3A-207ENST00000461228 VCX3AQ9NNX9 186 aa10.39□□□□□ -0.75
DNMT3A-207ENST00000461228 RFNGQ9Y644 331 aa10.39□□□□□ -0.75
DNMT3A-207ENST00000461228 C3orf85A0A1B0GTC6 90 aa10.38□□□□□ -0.75
DNMT3A-207ENST00000461228 IFNA10P01566 189 aa10.38□□□□□ -0.75
DNMT3A-207ENST00000461228 IFNA21P01568 189 aa10.38□□□□□ -0.75
DNMT3A-207ENST00000461228 RPS19P39019 145 aaKnown RBP10.38□□□□□ -0.75
DNMT3A-207ENST00000461228 USF2Q15853 346 aaPredicted RBP10.38□□□□□ -0.75
DNMT3A-207ENST00000461228 OR8G2PQ6IF36 304 aa10.38□□□□□ -0.75
DNMT3A-207ENST00000461228 ETFRF1Q6IPR1 90 aa10.38□□□□□ -0.75
DNMT3A-207ENST00000461228 PRSS54Q6PEW0 395 aa10.38□□□□□ -0.75
DNMT3A-207ENST00000461228 FOXI2Q6ZQN5 318 aa10.38□□□□□ -0.75
DNMT3A-207ENST00000461228 SLC24A4Q8NFF2 622 aa10.38□□□□□ -0.75
DNMT3A-207ENST00000461228 ZFAND1Q8TCF1 268 aa10.38□□□□□ -0.75
DNMT3A-207ENST00000461228 RRNAD1Q96FB5 475 aaKnown RBP10.38□□□□□ -0.75
DNMT3A-207ENST00000461228 DKK2Q9UBU2 259 aa10.38□□□□□ -0.75
DNMT3A-207ENST00000461228 DNAH5Q8TE73 4624 aa10.38□□□□□ -0.75
DNMT3A-207ENST00000461228 SMIM31A0A1B0GVY4 71 aa10.37□□□□□ -0.75
DNMT3A-207ENST00000461228 TOMM40O96008 361 aa10.37□□□□□ -0.75
DNMT3A-207ENST00000461228 OR10J1P30954 320 aa10.37□□□□□ -0.75
DNMT3A-207ENST00000461228 PSMB3P49720 205 aa10.37□□□□□ -0.75
DNMT3A-207ENST00000461228 NEDD8Q15843 81 aa10.37□□□□□ -0.75
DNMT3A-207ENST00000461228 IZUMO4Q1ZYL8 232 aa10.37□□□□□ -0.75
DNMT3A-207ENST00000461228 TIGITQ495A1 244 aa10.37□□□□□ -0.75
DNMT3A-207ENST00000461228 SPINK9Q5DT21 86 aa10.37□□□□□ -0.75
DNMT3A-207ENST00000461228 RNASE10Q5GAN6 216 aaKnown RBP10.37□□□□□ -0.75
DNMT3A-207ENST00000461228 NOXA1Q86UR1 476 aa10.37□□□□□ -0.75
DNMT3A-207ENST00000461228 C15orf53Q8NAA6 179 aa10.37□□□□□ -0.75
DNMT3A-207ENST00000461228 XCL2Q9UBD3 114 aa10.37□□□□□ -0.75
DNMT3A-207ENST00000461228 PFDN2Q9UHV9 154 aa10.37□□□□□ -0.75
DNMT3A-207ENST00000461228 CDS2O95674 445 aa10.36□□□□□ -0.75
DNMT3A-207ENST00000461228 IL4P05112 153 aa10.36□□□□□ -0.75
DNMT3A-207ENST00000461228 RND2P52198 227 aa10.36□□□□□ -0.75
DNMT3A-207ENST00000461228 PAX9P55771 341 aa10.36□□□□□ -0.75
DNMT3A-207ENST00000461228 UBE2DNLQ8IWF7 75 aa10.36□□□□□ -0.75
DNMT3A-207ENST00000461228 ZNF709Q8N972 641 aa10.36□□□□□ -0.75
DNMT3A-207ENST00000461228 NIPSNAP3BQ9BS92 247 aa10.36□□□□□ -0.75
DNMT3A-207ENST00000461228 TMEM222Q9H0R3 208 aa10.36□□□□□ -0.75
DNMT3A-207ENST00000461228 SAV1Q9H4B6 383 aaPredicted RBP10.36□□□□□ -0.75
DNMT3A-207ENST00000461228 A8MTW9 85 aa10.35□□□□□ -0.75
DNMT3A-207ENST00000461228 PGAM2P15259 253 aa10.35□□□□□ -0.75
DNMT3A-207ENST00000461228 ETV6P41212 452 aa10.35□□□□□ -0.75
DNMT3A-207ENST00000461228 SURF2Q15527 256 aaPredicted RBP10.35□□□□□ -0.75
DNMT3A-207ENST00000461228 ZNF79Q15937 498 aa10.35□□□□□ -0.75
DNMT3A-207ENST00000461228 TRIM16LQ309B1 348 aa10.35□□□□□ -0.75
DNMT3A-207ENST00000461228 C1orf194Q5T5A4 169 aa10.35□□□□□ -0.75
DNMT3A-207ENST00000461228 C1orf134Q5TEV5 83 aa10.35□□□□□ -0.75
DNMT3A-207ENST00000461228 C15orf40Q8WUR7 153 aa10.35□□□□□ -0.75
DNMT3A-207ENST00000461228 RBPMSQ93062 196 aaKnown RBP10.35□□□□□ -0.75
DNMT3A-207ENST00000461228 SCRT1Q9BWW7 348 aa10.35□□□□□ -0.75
DNMT3A-207ENST00000461228 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.35□□□□□ -0.75
DNMT3A-207ENST00000461228 COPZ2Q9P299 210 aa10.35□□□□□ -0.75
DNMT3A-207ENST00000461228 A0A0G2JRQ6 117 aa10.34□□□□□ -0.75
DNMT3A-207ENST00000461228 SOCS3O14543 225 aa10.34□□□□□ -0.75
DNMT3A-207ENST00000461228 ATP5IP56385 69 aaPredicted RBP10.34□□□□□ -0.75
DNMT3A-207ENST00000461228 DHODHQ02127 395 aa10.34□□□□□ -0.75
DNMT3A-207ENST00000461228 NMSQ5H8A3 153 aa10.34□□□□□ -0.75
DNMT3A-207ENST00000461228 ZNF767PQ75MW2 155 aa10.34□□□□□ -0.75
DNMT3A-207ENST00000461228 YIPF6Q96EC8 236 aa10.34□□□□□ -0.75
DNMT3A-207ENST00000461228 RNF125Q96EQ8 232 aa10.34□□□□□ -0.75
DNMT3A-207ENST00000461228 HERC1Q15751 4861 aa10.34□□□□□ -0.75
DNMT3A-207ENST00000461228 ISLRO14498 428 aa10.33□□□□□ -0.76
DNMT3A-207ENST00000461228 TGFBR1P36897 503 aa10.33□□□□□ -0.76
DNMT3A-207ENST00000461228 SSBP1Q04837 148 aaKnown RBP10.33□□□□□ -0.76
DNMT3A-207ENST00000461228 FAM222AQ5U5X8 452 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms