RNA–Protein interactions for RNA: ENST00000460627.5

CHRD-208, Transcript of chordin, humanhuman

TSL 2

Gene CHRD, Length 4,719 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-208ENST00000460627 MBD3L1Q8WWY6 194 aa14.45□□□□□ -0.1
CHRD-208ENST00000460627 GGTLC1Q9BX51 225 aa14.45□□□□□ -0.1
CHRD-208ENST00000460627 ANAPC10Q9UM13 185 aa14.45□□□□□ -0.1
CHRD-208ENST00000460627 IGKV1-6A0A0C4DH72 117 aa14.44□□□□□ -0.1
CHRD-208ENST00000460627 FGF16O43320 207 aa14.44□□□□□ -0.1
CHRD-208ENST00000460627 PAX8Q06710 450 aa14.44□□□□□ -0.1
CHRD-208ENST00000460627 TEX36Q5VZQ5 186 aa14.44□□□□□ -0.1
CHRD-208ENST00000460627 OR8A1Q8NGG7 326 aa14.44□□□□□ -0.1
CHRD-208ENST00000460627 TMEM190Q8WZ59 177 aa14.44□□□□□ -0.1
CHRD-208ENST00000460627 MAP1LC3AQ9H492 121 aa14.44□□□□□ -0.1
CHRD-208ENST00000460627 J3QKU1 62 aa14.44□□□□□ -0.1
CHRD-208ENST00000460627 SMIM6P0DI80 62 aa14.44□□□□□ -0.1
CHRD-208ENST00000460627 FAM53AQ6NSI3 398 aaPredicted RBP14.44□□□□□ -0.1
CHRD-208ENST00000460627 TMEM219Q86XT9 240 aa14.44□□□□□ -0.1
CHRD-208ENST00000460627 ANKHD1Q8IWZ3 2542 aaKnown RBP14.44□□□□□ -0.1
CHRD-208ENST00000460627 LOC389332A0A1B0GUA5 103 aa14.44□□□□□ -0.1
CHRD-208ENST00000460627 A0A1B0GWJ7 208 aa14.44□□□□□ -0.1
CHRD-208ENST00000460627 MSMBP08118 114 aa14.44□□□□□ -0.1
CHRD-208ENST00000460627 WFDC1Q9HC57 220 aa14.44□□□□□ -0.1
CHRD-208ENST00000460627 C8orf46Q8TAG6 207 aa14.43□□□□□ -0.1
CHRD-208ENST00000460627 NOTCH3Q9UM47 2321 aa14.43□□□□□ -0.1
CHRD-208ENST00000460627 SHANK1Q9Y566 2161 aa14.43□□□□□ -0.1
CHRD-208ENST00000460627 TRAV3A0A0B4J244 114 aa14.43□□□□□ -0.1
CHRD-208ENST00000460627 SAA4P35542 130 aa14.43□□□□□ -0.1
CHRD-208ENST00000460627 SRSF4Q08170 494 aaKnown RBP14.43□□□□□ -0.1
CHRD-208ENST00000460627 ATG101Q9BSB4 218 aa14.43□□□□□ -0.1
CHRD-208ENST00000460627 TGIF2-C20orf24A0A0A6YYL0 155 aa14.43□□□□□ -0.1
CHRD-208ENST00000460627 HBBP68871 147 aa14.43□□□□□ -0.1
CHRD-208ENST00000460627 CCL20P78556 96 aa14.43□□□□□ -0.1
CHRD-208ENST00000460627 C15orf32Q32M92 178 aa14.43□□□□□ -0.1
CHRD-208ENST00000460627 F11RQ9Y624 299 aaKnown RBP14.43□□□□□ -0.1
CHRD-208ENST00000460627 Q6AWC8 147 aa14.43□□□□□ -0.1
CHRD-208ENST00000460627 SPSB3Q6PJ21 355 aa14.43□□□□□ -0.1
CHRD-208ENST00000460627 SRSF8Q9BRL6 282 aaKnown RBP14.43□□□□□ -0.1
CHRD-208ENST00000460627 UBE2E1P51965 193 aa14.42□□□□□ -0.1
CHRD-208ENST00000460627 LINC00527Q9UJ94 153 aa14.42□□□□□ -0.1
CHRD-208ENST00000460627 DKK4Q9UBT3 224 aa14.42□□□□□ -0.1
CHRD-208ENST00000460627 Q1RN00 199 aa14.41□□□□□ -0.1
CHRD-208ENST00000460627 SDF2L1Q9HCN8 221 aa14.41□□□□□ -0.1
CHRD-208ENST00000460627 DCAF16Q9NXF7 216 aa14.41□□□□□ -0.1
CHRD-208ENST00000460627 PSMB11A5LHX3 300 aa14.41□□□□□ -0.1
CHRD-208ENST00000460627 TRGV9Q99603 122 aa14.41□□□□□ -0.1
CHRD-208ENST00000460627 IL36BQ9NZH7 164 aa14.41□□□□□ -0.1
CHRD-208ENST00000460627 A0A1W2PRX2 142 aa14.41□□□□□ -0.1
CHRD-208ENST00000460627 LOXP28300 417 aaPredicted RBP14.41□□□□□ -0.1
CHRD-208ENST00000460627 SOX21Q9Y651 276 aaPredicted RBP14.41□□□□□ -0.1
CHRD-208ENST00000460627 ASIPP42127 132 aa14.41□□□□□ -0.1
CHRD-208ENST00000460627 ZNF585BQ52M93 769 aa14.4□□□□□ -0.1
CHRD-208ENST00000460627 ITLN2Q8WWU7 325 aaPredicted RBP14.4□□□□□ -0.1
CHRD-208ENST00000460627 EPDR1Q9UM22 224 aa14.4□□□□□ -0.1
CHRD-208ENST00000460627 GGCTO75223 188 aaKnown RBP14.4□□□□□ -0.1
CHRD-208ENST00000460627 SRIP30626 198 aa14.4□□□□□ -0.1
CHRD-208ENST00000460627 M0R143 59 aa14.4□□□□□ -0.1
CHRD-208ENST00000460627 SCGB1D4Q6XE38 83 aa14.4□□□□□ -0.1
CHRD-208ENST00000460627 ZNF841Q6ZN19 808 aa14.4□□□□□ -0.1
CHRD-208ENST00000460627 NEU1Q99519 415 aa14.4□□□□□ -0.1
CHRD-208ENST00000460627 TUBA4BQ9H853 241 aa14.4□□□□□ -0.1
CHRD-208ENST00000460627 KAAG1Q9UBP8 84 aa14.4□□□□□ -0.1
CHRD-208ENST00000460627 A0A1B0GUT8 65 aa14.39□□□□□ -0.11
CHRD-208ENST00000460627 DUSP14O95147 198 aaKnown RBP14.39□□□□□ -0.11
CHRD-208ENST00000460627 STAG3L2P0CL84 134 aa14.39□□□□□ -0.11
CHRD-208ENST00000460627 STAG3L3P0CL85 134 aa14.39□□□□□ -0.11
CHRD-208ENST00000460627 PYYP10082 97 aa14.39□□□□□ -0.11
CHRD-208ENST00000460627 PAX1P15863 534 aa14.39□□□□□ -0.11
CHRD-208ENST00000460627 BTF3P20290 206 aaKnown RBP14.39□□□□□ -0.11
CHRD-208ENST00000460627 VAMP3Q15836 100 aa14.39□□□□□ -0.11
CHRD-208ENST00000460627 ASCL2Q99929 193 aa14.39□□□□□ -0.11
CHRD-208ENST00000460627 MED13Q9UHV7 2174 aa14.39□□□□□ -0.11
CHRD-208ENST00000460627 RPP21Q9H633 154 aaKnown RBP14.39□□□□□ -0.11
CHRD-208ENST00000460627 TRAV9-1A0A075B6T8 112 aa14.39□□□□□ -0.11
CHRD-208ENST00000460627 A0A087WWC5 75 aa14.39□□□□□ -0.11
CHRD-208ENST00000460627 IGKV1-16P04430 117 aa14.39□□□□□ -0.11
CHRD-208ENST00000460627 PSG1P11464 419 aa14.39□□□□□ -0.11
CHRD-208ENST00000460627 LEMD1Q68G75 181 aa14.39□□□□□ -0.11
CHRD-208ENST00000460627 Q8NFD4 153 aa14.39□□□□□ -0.11
CHRD-208ENST00000460627 ZFP30Q9Y2G7 519 aa14.39□□□□□ -0.11
CHRD-208ENST00000460627 TRAV1-1A0A0B4J248 108 aa14.39□□□□□ -0.11
CHRD-208ENST00000460627 LINC00311Q8N616 119 aa14.39□□□□□ -0.11
CHRD-208ENST00000460627 CYTL1Q9NRR1 136 aa14.39□□□□□ -0.11
CHRD-208ENST00000460627 DIRC3C9JPN6 131 aa14.38□□□□□ -0.11
CHRD-208ENST00000460627 LINC00205P59089 165 aa14.38□□□□□ -0.11
CHRD-208ENST00000460627 USMG5Q96IX5 58 aa14.38□□□□□ -0.11
CHRD-208ENST00000460627 PRO1933Q9H354 126 aa14.38□□□□□ -0.11
CHRD-208ENST00000460627 A0A0G2JRQ6 117 aa14.38□□□□□ -0.11
CHRD-208ENST00000460627 FABP5P3A8MUU1 101 aa14.38□□□□□ -0.11
CHRD-208ENST00000460627 GCSAMLQ5JQS6 135 aa14.38□□□□□ -0.11
CHRD-208ENST00000460627 AMMECR1LQ6DCA0 310 aa14.38□□□□□ -0.11
CHRD-208ENST00000460627 PLCE1Q9P212 2302 aa14.38□□□□□ -0.11
CHRD-208ENST00000460627 A0A1B0GW15 77 aa14.38□□□□□ -0.11
CHRD-208ENST00000460627 RNF223E7ERA6 249 aa14.38□□□□□ -0.11
CHRD-208ENST00000460627 FNDC10F2Z333 226 aa14.38□□□□□ -0.11
CHRD-208ENST00000460627 LEPROTL1O95214 131 aa14.38□□□□□ -0.11
CHRD-208ENST00000460627 Q5PR19 223 aa14.38□□□□□ -0.11
CHRD-208ENST00000460627 LDLRAD2Q5SZI1 272 aa14.38□□□□□ -0.11
CHRD-208ENST00000460627 Q6ZRM9 215 aa14.38□□□□□ -0.11
CHRD-208ENST00000460627 HSPB9Q9BQS6 159 aa14.38□□□□□ -0.11
CHRD-208ENST00000460627 PPP1R17O96001 155 aa14.37□□□□□ -0.11
CHRD-208ENST00000460627 ZNF56Q15929 161 aa14.37□□□□□ -0.11
CHRD-208ENST00000460627 KIAA1644Q3SXP7 199 aa14.37□□□□□ -0.11
CHRD-208ENST00000460627 ZNF562Q6V9R5 426 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms