RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 IGLC7A0M8Q6 106 aa7.13□□□□□ -1.27
HDAC3-202ENST00000459727 FAM231BA6NCW3 169 aa7.13□□□□□ -1.27
HDAC3-202ENST00000459727 ZNF705FA8MVS1 300 aaPredicted RBP7.13□□□□□ -1.27
HDAC3-202ENST00000459727 C22orf46C9J442 243 aa7.13□□□□□ -1.27
HDAC3-202ENST00000459727 SLC25A17O43808 307 aa7.13□□□□□ -1.27
HDAC3-202ENST00000459727 SERF1AO75920 110 aa7.13□□□□□ -1.27
HDAC3-202ENST00000459727 APCSP02743 223 aa7.13□□□□□ -1.27
HDAC3-202ENST00000459727 ZNF705DP0CH99 300 aaPredicted RBP7.13□□□□□ -1.27
HDAC3-202ENST00000459727 ZNF705BP0CI00 300 aaPredicted RBP7.13□□□□□ -1.27
HDAC3-202ENST00000459727 MYOD1P15172 320 aa7.13□□□□□ -1.27
HDAC3-202ENST00000459727 CEACAM3P40198 252 aa7.13□□□□□ -1.27
HDAC3-202ENST00000459727 UCNP55089 124 aa7.13□□□□□ -1.27
HDAC3-202ENST00000459727 TBR1Q16650 682 aa7.13□□□□□ -1.27
HDAC3-202ENST00000459727 TEX43Q6ZNM6 134 aa7.13□□□□□ -1.27
HDAC3-202ENST00000459727 TMEM136Q6ZRR5 245 aa7.13□□□□□ -1.27
HDAC3-202ENST00000459727 TSKUQ8WUA8 353 aa7.13□□□□□ -1.27
HDAC3-202ENST00000459727 GPR82Q96P67 336 aa7.13□□□□□ -1.27
HDAC3-202ENST00000459727 GFRA4Q9GZZ7 299 aa7.13□□□□□ -1.27
HDAC3-202ENST00000459727 PRO1933Q9H354 126 aa7.13□□□□□ -1.27
HDAC3-202ENST00000459727 SERTAD4Q9NUC0 356 aa7.13□□□□□ -1.27
HDAC3-202ENST00000459727 TMEM14CQ9P0S9 112 aa7.13□□□□□ -1.27
HDAC3-202ENST00000459727 ZNF492Q9P255 531 aa7.13□□□□□ -1.27
HDAC3-202ENST00000459727 CTSZQ9UBR2 303 aa7.13□□□□□ -1.27
HDAC3-202ENST00000459727 EPDR1Q9UM22 224 aa7.13□□□□□ -1.27
HDAC3-202ENST00000459727 KLF12Q9Y4X4 402 aa7.13□□□□□ -1.27
HDAC3-202ENST00000459727 INSIG2Q9Y5U4 225 aa7.13□□□□□ -1.27
HDAC3-202ENST00000459727 CNOT1A5YKK6 2376 aaKnown RBP7.12□□□□□ -1.27
HDAC3-202ENST00000459727 KNTC1P50748 2209 aa7.12□□□□□ -1.27
HDAC3-202ENST00000459727 A8MWL6 223 aa7.12□□□□□ -1.27
HDAC3-202ENST00000459727 E7EQL1 145 aa7.12□□□□□ -1.27
HDAC3-202ENST00000459727 M0R143 59 aa7.12□□□□□ -1.27
HDAC3-202ENST00000459727 ENSAO43768 121 aaKnown RBP7.12□□□□□ -1.27
HDAC3-202ENST00000459727 OR2J3O76001 311 aa7.12□□□□□ -1.27
HDAC3-202ENST00000459727 TOMM40O96008 361 aa7.12□□□□□ -1.27
HDAC3-202ENST00000459727 IGLV2-8P01709 118 aa7.12□□□□□ -1.27
HDAC3-202ENST00000459727 CRYGBP07316 175 aa7.12□□□□□ -1.27
HDAC3-202ENST00000459727 MYCNOSP40205 109 aa7.12□□□□□ -1.27
HDAC3-202ENST00000459727 REG1BP48304 166 aa7.12□□□□□ -1.27
HDAC3-202ENST00000459727 TNXAQ16473 311 aa7.12□□□□□ -1.27
HDAC3-202ENST00000459727 LINC00305Q7Z4B0 112 aa7.12□□□□□ -1.27
HDAC3-202ENST00000459727 MOB3BQ86TA1 216 aa7.12□□□□□ -1.27
HDAC3-202ENST00000459727 PPP1R27Q86WC6 154 aa7.12□□□□□ -1.27
HDAC3-202ENST00000459727 TMEM256Q8N2U0 113 aa7.12□□□□□ -1.27
HDAC3-202ENST00000459727 Q8NA96 180 aa7.12□□□□□ -1.27
HDAC3-202ENST00000459727 OR8B3Q8NGG8 313 aa7.12□□□□□ -1.27
HDAC3-202ENST00000459727 OR2T6Q8NHC8 308 aa7.12□□□□□ -1.27
HDAC3-202ENST00000459727 RPEQ96AT9 228 aa7.12□□□□□ -1.27
HDAC3-202ENST00000459727 FXYD5Q96DB9 178 aa7.12□□□□□ -1.27
HDAC3-202ENST00000459727 TIMD4Q96H15 378 aa7.12□□□□□ -1.27
HDAC3-202ENST00000459727 WFIKKN1Q96NZ8 548 aa7.12□□□□□ -1.27
HDAC3-202ENST00000459727 OR8B2Q96RD0 313 aa7.12□□□□□ -1.27
HDAC3-202ENST00000459727 VAMP8Q9BV40 100 aa7.12□□□□□ -1.27
HDAC3-202ENST00000459727 FNDC4Q9H6D8 234 aaPredicted RBP7.12□□□□□ -1.27
HDAC3-202ENST00000459727 DCAF16Q9NXF7 216 aa7.12□□□□□ -1.27
HDAC3-202ENST00000459727 SIGLEC9Q9Y336 463 aa7.12□□□□□ -1.27
HDAC3-202ENST00000459727 F11RQ9Y624 299 aaKnown RBP7.12□□□□□ -1.27
HDAC3-202ENST00000459727 NAV2Q8IVL1 2488 aa7.12□□□□□ -1.27
HDAC3-202ENST00000459727 USF3Q68DE3 2245 aa7.12□□□□□ -1.27
HDAC3-202ENST00000459727 FREM2Q5SZK8 3169 aa7.12□□□□□ -1.27
HDAC3-202ENST00000459727 IGKV1D-37A0A075B6S9 117 aa7.11□□□□□ -1.27
HDAC3-202ENST00000459727 TRAV30A0A087WSZ9 112 aa7.11□□□□□ -1.27
HDAC3-202ENST00000459727 IGHV1-3A0A0C4DH29 117 aa7.11□□□□□ -1.27
HDAC3-202ENST00000459727 SERTM2A0A1B0GWG4 89 aa7.11□□□□□ -1.27
HDAC3-202ENST00000459727 C20orf202A1L168 122 aa7.11□□□□□ -1.27
HDAC3-202ENST00000459727 FBLL1A6NHQ2 334 aaKnown RBP7.11□□□□□ -1.27
HDAC3-202ENST00000459727 CGB1A6NKQ9 187 aa7.11□□□□□ -1.27
HDAC3-202ENST00000459727 OOSP1A8MZH6 123 aa7.11□□□□□ -1.27
HDAC3-202ENST00000459727 BUB1B-PAK6H3BSN5 160 aa7.11□□□□□ -1.27
HDAC3-202ENST00000459727 K7EM74 188 aa7.11□□□□□ -1.27
HDAC3-202ENST00000459727 K7ENP7 123 aa7.11□□□□□ -1.27
HDAC3-202ENST00000459727 K7EQM0 130 aa7.11□□□□□ -1.27
HDAC3-202ENST00000459727 ZNF253O75346 499 aa7.11□□□□□ -1.27
HDAC3-202ENST00000459727 ZNF324O75467 553 aaPredicted RBP7.11□□□□□ -1.27
HDAC3-202ENST00000459727 IGLV1-47P01700 117 aa7.11□□□□□ -1.27
HDAC3-202ENST00000459727 SLC25A5P05141 298 aaKnown RBP7.11□□□□□ -1.27
HDAC3-202ENST00000459727 LIPFP07098 398 aa7.11□□□□□ -1.27
HDAC3-202ENST00000459727 NBEAP1P0C6P0 100 aa7.11□□□□□ -1.27
HDAC3-202ENST00000459727 GATA2P23769 480 aaPredicted RBP7.11□□□□□ -1.27
HDAC3-202ENST00000459727 OR5I1Q13606 314 aa7.11□□□□□ -1.27
HDAC3-202ENST00000459727 KLF5Q13887 457 aaPredicted RBP7.11□□□□□ -1.27
HDAC3-202ENST00000459727 PMCHL1Q16048 86 aa7.11□□□□□ -1.27
HDAC3-202ENST00000459727 LYPD2Q6UXB3 125 aa7.11□□□□□ -1.27
HDAC3-202ENST00000459727 ZNF600Q6ZNG1 722 aa7.11□□□□□ -1.27
HDAC3-202ENST00000459727 C22orf34Q6ZV56 151 aa7.11□□□□□ -1.27
HDAC3-202ENST00000459727 DMRTC2Q8IXT2 367 aaPredicted RBP7.11□□□□□ -1.27
HDAC3-202ENST00000459727 LYPD1Q8N2G4 141 aa7.11□□□□□ -1.27
HDAC3-202ENST00000459727 ARL6IP6Q8N6S5 226 aa7.11□□□□□ -1.27
HDAC3-202ENST00000459727 KLHDC1Q8N7A1 406 aa7.11□□□□□ -1.27
HDAC3-202ENST00000459727 ST6GALNAC3Q8NDV1 305 aa7.11□□□□□ -1.27
HDAC3-202ENST00000459727 OR1B1Q8NGR6 318 aa7.11□□□□□ -1.27
HDAC3-202ENST00000459727 SNRNP40Q96DI7 357 aaKnown RBP7.11□□□□□ -1.27
HDAC3-202ENST00000459727 MBD6Q96DN6 1003 aa7.11□□□□□ -1.27
HDAC3-202ENST00000459727 MISP3Q96FF7 219 aa7.11□□□□□ -1.27
HDAC3-202ENST00000459727 TMEM68Q96MH6 324 aa7.11□□□□□ -1.27
HDAC3-202ENST00000459727 TBX15Q96SF7 602 aa7.11□□□□□ -1.27
HDAC3-202ENST00000459727 HSPB9Q9BQS6 159 aa7.11□□□□□ -1.27
HDAC3-202ENST00000459727 RAB1BQ9H0U4 201 aa7.11□□□□□ -1.27
HDAC3-202ENST00000459727 RNASE7Q9H1E1 156 aaKnown RBP7.11□□□□□ -1.27
HDAC3-202ENST00000459727 OTORQ9NRC9 128 aa7.11□□□□□ -1.27
HDAC3-202ENST00000459727 HIGD1AQ9Y241 93 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms