RNA–Protein interactions for RNA: ENST00000459004.1

SCARNA18-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 134 nt, Biotype snoRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18-201ENST00000459004 V9GYY5 206 aaPredicted RBP0.12□□□□□ -2.39
SCARNA18-201ENST00000459004 WRNQ14191 1432 aaPredicted RBP eCLIP0.12□□□□□ -2.39
SCARNA18-201ENST00000459004 MYO3BQ8WXR4 1341 aa0.12□□□□□ -2.39
SCARNA18-201ENST00000459004 MED1Q15648 1581 aaPredicted RBP0.11□□□□□ -2.39
SCARNA18-201ENST00000459004 HECW2Q9P2P5 1572 aa0.11□□□□□ -2.39
SCARNA18-201ENST00000459004 SYNE2Q8WXH0 6885 aaKnown RBP0.11□□□□□ -2.39
SCARNA18-201ENST00000459004 TRBV6-4A0A1B0GX49 114 aa0.11□□□□□ -2.39
SCARNA18-201ENST00000459004 PIRO00625 290 aa0.11□□□□□ -2.39
SCARNA18-201ENST00000459004 OR4E1P0C645 316 aa0.11□□□□□ -2.39
SCARNA18-201ENST00000459004 HIST1H1EP10412 219 aaKnown RBP0.11□□□□□ -2.39
SCARNA18-201ENST00000459004 RPS20P60866 119 aaKnown RBP0.11□□□□□ -2.39
SCARNA18-201ENST00000459004 YPEL3P61236 119 aaPredicted RBP0.11□□□□□ -2.39
SCARNA18-201ENST00000459004 MAGOHP61326 146 aaKnown RBP0.11□□□□□ -2.39
SCARNA18-201ENST00000459004 ESRGQ1W209 222 aa0.11□□□□□ -2.39
SCARNA18-201ENST00000459004 LINC01554Q52M75 96 aa0.11□□□□□ -2.39
SCARNA18-201ENST00000459004 BRMS1LQ5PSV4 323 aa0.11□□□□□ -2.39
SCARNA18-201ENST00000459004 LCA10Q71F78 164 aa0.11□□□□□ -2.39
SCARNA18-201ENST00000459004 CLECL1Q8IZS7 167 aa0.11□□□□□ -2.39
SCARNA18-201ENST00000459004 PLPP5Q8NEB5 264 aa0.11□□□□□ -2.39
SCARNA18-201ENST00000459004 OR52R1Q8NGF1 315 aa0.11□□□□□ -2.39
SCARNA18-201ENST00000459004 PPP1R2P1Q96PQ5 205 aa0.11□□□□□ -2.39
SCARNA18-201ENST00000459004 TMEM14CQ9P0S9 112 aa0.11□□□□□ -2.39
SCARNA18-201ENST00000459004 PKIGQ9Y2B9 76 aa0.11□□□□□ -2.39
SCARNA18-201ENST00000459004 NEBP20929 6669 aa0.11□□□□□ -2.39
SCARNA18-201ENST00000459004 SSPOA2VEC9 5147 aa0.1□□□□□ -2.39
SCARNA18-201ENST00000459004 CCL16O15467 120 aa0.1□□□□□ -2.39
SCARNA18-201ENST00000459004 CRYZL1O95825 349 aa0.1□□□□□ -2.39
SCARNA18-201ENST00000459004 SMIM10L2AP0DMW4 78 aa0.1□□□□□ -2.39
SCARNA18-201ENST00000459004 SMIM10L2BP0DMW5 78 aa0.1□□□□□ -2.39
SCARNA18-201ENST00000459004 TPM4P67936 248 aa0.1□□□□□ -2.39
SCARNA18-201ENST00000459004 ACOT6Q3I5F7 207 aaPredicted RBP0.1□□□□□ -2.39
SCARNA18-201ENST00000459004 LLPHQ9BRT6 129 aaKnown RBP0.1□□□□□ -2.39
SCARNA18-201ENST00000459004 C6orf62Q9GZU0 229 aaPredicted RBP0.1□□□□□ -2.39
SCARNA18-201ENST00000459004 C14orf132Q9NPU4 83 aa0.1□□□□□ -2.39
SCARNA18-201ENST00000459004 PLAC8Q9NZF1 115 aa0.1□□□□□ -2.39
SCARNA18-201ENST00000459004 GUCA1BQ9UMX6 200 aa0.1□□□□□ -2.39
SCARNA18-201ENST00000459004 MUC2Q02817 5179 aa0.09□□□□□ -2.39
SCARNA18-201ENST00000459004 A0A087X0T9 212 aa0.09□□□□□ -2.4
SCARNA18-201ENST00000459004 TGIF2-C20orf24A0A0A6YYL0 155 aa0.09□□□□□ -2.4
SCARNA18-201ENST00000459004 OR2T8A6NH00 312 aa0.09□□□□□ -2.4
SCARNA18-201ENST00000459004 RBP1P09455 135 aa0.09□□□□□ -2.4
SCARNA18-201ENST00000459004 SULT1A1P50225 295 aa0.09□□□□□ -2.4
SCARNA18-201ENST00000459004 CIRBPQ14011 172 aaKnown RBP0.09□□□□□ -2.4
SCARNA18-201ENST00000459004 TSNQ15631 228 aaKnown RBP0.09□□□□□ -2.4
SCARNA18-201ENST00000459004 C8orf74Q6P047 294 aa0.09□□□□□ -2.4
SCARNA18-201ENST00000459004 LINC00575Q6W349 94 aa0.09□□□□□ -2.4
SCARNA18-201ENST00000459004 PRRT1Q99946 306 aa0.09□□□□□ -2.4
SCARNA18-201ENST00000459004 TLNRD1Q9H1K6 362 aa0.09□□□□□ -2.4
SCARNA18-201ENST00000459004 MRPL27Q9P0M9 148 aaKnown RBP0.09□□□□□ -2.4
SCARNA18-201ENST00000459004 CYSLTR1Q9Y271 337 aa0.09□□□□□ -2.4
SCARNA18-201ENST00000459004 DOCK3Q8IZD9 2030 aa0.09□□□□□ -2.4
SCARNA18-201ENST00000459004 ALPK3Q96L96 1907 aa0.09□□□□□ -2.4
SCARNA18-201ENST00000459004 ZNF106Q9H2Y7 1883 aaKnown RBP0.08□□□□□ -2.4
SCARNA18-201ENST00000459004 MUC12Q9UKN1 5478 aa0.08□□□□□ -2.4
SCARNA18-201ENST00000459004 TNS3Q68CZ2 1445 aa0.08□□□□□ -2.4
SCARNA18-201ENST00000459004 KMT2CQ8NEZ4 4911 aaKnown RBP0.08□□□□□ -2.4
SCARNA18-201ENST00000459004 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP0.08□□□□□ -2.4
SCARNA18-201ENST00000459004 TRAV26-2A0A0B4J265 109 aa0.08□□□□□ -2.4
SCARNA18-201ENST00000459004 TLCD2A6NGC4 264 aa0.08□□□□□ -2.4
SCARNA18-201ENST00000459004 OR4C46A6NHA9 309 aa0.08□□□□□ -2.4
SCARNA18-201ENST00000459004 CETN3O15182 167 aa0.08□□□□□ -2.4
SCARNA18-201ENST00000459004 CASP1P29466 404 aa0.08□□□□□ -2.4
SCARNA18-201ENST00000459004 ANP32AP39687 249 aaKnown RBP0.08□□□□□ -2.4
SCARNA18-201ENST00000459004 DEFA1P59665 94 aa0.08□□□□□ -2.4
SCARNA18-201ENST00000459004 SPINK9Q5DT21 86 aa0.08□□□□□ -2.4
SCARNA18-201ENST00000459004 KRT222Q8N1A0 295 aa0.08□□□□□ -2.4
SCARNA18-201ENST00000459004 OR11H6Q8NGC7 330 aa0.08□□□□□ -2.4
SCARNA18-201ENST00000459004 OR8D4Q8NGM9 314 aa0.08□□□□□ -2.4
SCARNA18-201ENST00000459004 OR2T10Q8NGZ9 312 aa0.08□□□□□ -2.4
SCARNA18-201ENST00000459004 TMEM254Q8TBM7 123 aa0.08□□□□□ -2.4
SCARNA18-201ENST00000459004 DCUN1D1Q96GG9 259 aa0.08□□□□□ -2.4
SCARNA18-201ENST00000459004 HIST1H2BLQ99880 126 aa0.08□□□□□ -2.4
SCARNA18-201ENST00000459004 PHRF1Q9P1Y6 1649 aaKnown RBP0.08□□□□□ -2.4
SCARNA18-201ENST00000459004 CASP8AP2Q9UKL3 1982 aa0.08□□□□□ -2.4
SCARNA18-201ENST00000459004 ROBO3Q96MS0 1386 aa0.07□□□□□ -2.4
SCARNA18-201ENST00000459004 KIAA1549Q9HCM3 1950 aa0.07□□□□□ -2.4
SCARNA18-201ENST00000459004 IGHV1-58A0A0C4DH39 117 aa0.07□□□□□ -2.4
SCARNA18-201ENST00000459004 CHP2O43745 196 aa0.07□□□□□ -2.4
SCARNA18-201ENST00000459004 NUPR1O60356 82 aa0.07□□□□□ -2.4
SCARNA18-201ENST00000459004 KLF7O75840 302 aaPredicted RBP0.07□□□□□ -2.4
SCARNA18-201ENST00000459004 ZNF682O95780 498 aa0.07□□□□□ -2.4
SCARNA18-201ENST00000459004 DHFRP00374 187 aa0.07□□□□□ -2.4
SCARNA18-201ENST00000459004 IFNA5P01569 189 aa0.07□□□□□ -2.4
SCARNA18-201ENST00000459004 IGLV3-1P01715 115 aa0.07□□□□□ -2.4
SCARNA18-201ENST00000459004 NKX2-5P52952 324 aaPredicted RBP0.07□□□□□ -2.4
SCARNA18-201ENST00000459004 CDKL4Q5MAI5 379 aa0.07□□□□□ -2.4
SCARNA18-201ENST00000459004 CCDC122Q5T0U0 273 aa0.07□□□□□ -2.4
SCARNA18-201ENST00000459004 ST6GALNAC3Q8NDV1 305 aa0.07□□□□□ -2.4
SCARNA18-201ENST00000459004 CCDC90BQ9GZT6 254 aa0.07□□□□□ -2.4
SCARNA18-201ENST00000459004 UTP11Q9Y3A2 253 aaKnown RBP0.07□□□□□ -2.4
SCARNA18-201ENST00000459004 CHCHD2Q9Y6H1 151 aaPredicted RBP0.07□□□□□ -2.4
SCARNA18-201ENST00000459004 SCN3AQ9NY46 2000 aa0.07□□□□□ -2.4
SCARNA18-201ENST00000459004 RYR2Q92736 4967 aa0.07□□□□□ -2.4
SCARNA18-201ENST00000459004 DSTQ03001 7570 aaKnown RBP0.07□□□□□ -2.4
SCARNA18-201ENST00000459004 KDM6AO15550 1401 aaPredicted RBP0.06□□□□□ -2.4
SCARNA18-201ENST00000459004 A0A0D9SG42 100 aa0.06□□□□□ -2.4
SCARNA18-201ENST00000459004 TTRP02766 147 aa0.06□□□□□ -2.4
SCARNA18-201ENST00000459004 KRTAP2-3P0C7H8 128 aa0.06□□□□□ -2.4
SCARNA18-201ENST00000459004 COTL1Q14019 142 aa0.06□□□□□ -2.4
SCARNA18-201ENST00000459004 KRTAP26-1Q6PEX3 210 aa0.06□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms