RNA–Protein interactions for RNA: ENST00000458516.5

TRIM39-211, Transcript of tripartite motif containing 39, humanhuman

TSL 2

Gene TRIM39, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-211ENST00000458516 ZP3P21754 424 aa12.92□□□□□ -0.34
TRIM39-211ENST00000458516 HBG1P69891 147 aa12.92□□□□□ -0.34
TRIM39-211ENST00000458516 HBG2P69892 147 aa12.92□□□□□ -0.34
TRIM39-211ENST00000458516 RPEL1Q2QD12 228 aa12.92□□□□□ -0.34
TRIM39-211ENST00000458516 GGACTQ9BVM4 153 aa12.92□□□□□ -0.34
TRIM39-211ENST00000458516 TNFSF18Q9UNG2 199 aa12.92□□□□□ -0.34
TRIM39-211ENST00000458516 IGKV1D-37A0A075B6S9 117 aa12.91□□□□□ -0.34
TRIM39-211ENST00000458516 IGKV1OR2-108A0A075B7D4 117 aa12.91□□□□□ -0.34
TRIM39-211ENST00000458516 SMCO3A2RU48 225 aa12.91□□□□□ -0.34
TRIM39-211ENST00000458516 RNF222A6NCQ9 220 aa12.91□□□□□ -0.34
TRIM39-211ENST00000458516 NUPL2O15504 423 aaKnown RBP12.91□□□□□ -0.34
TRIM39-211ENST00000458516 OR2C1O95371 312 aa12.91□□□□□ -0.34
TRIM39-211ENST00000458516 IGKV1-17P01599 117 aa12.91□□□□□ -0.34
TRIM39-211ENST00000458516 PF4P02776 101 aa12.91□□□□□ -0.34
TRIM39-211ENST00000458516 OR10J1P30954 320 aa12.91□□□□□ -0.34
TRIM39-211ENST00000458516 S100A11P31949 105 aa12.91□□□□□ -0.34
TRIM39-211ENST00000458516 AKR1C1Q04828 323 aa12.91□□□□□ -0.34
TRIM39-211ENST00000458516 CD300CQ08708 224 aa12.91□□□□□ -0.34
TRIM39-211ENST00000458516 VWC2Q2TAL6 325 aa12.91□□□□□ -0.34
TRIM39-211ENST00000458516 TIGITQ495A1 244 aa12.91□□□□□ -0.34
TRIM39-211ENST00000458516 TMEM144Q7Z5S9 345 aa12.91□□□□□ -0.34
TRIM39-211ENST00000458516 LILRB2Q8N423 598 aa12.91□□□□□ -0.34
TRIM39-211ENST00000458516 THAP8Q8NA92 274 aa12.91□□□□□ -0.34
TRIM39-211ENST00000458516 OR11H4Q8NGC9 324 aa12.91□□□□□ -0.34
TRIM39-211ENST00000458516 OR1S2Q8NGQ3 325 aa12.91□□□□□ -0.34
TRIM39-211ENST00000458516 AQP10Q96PS8 301 aa12.91□□□□□ -0.34
TRIM39-211ENST00000458516 TRAV30A0A087WSZ9 112 aa12.9□□□□□ -0.34
TRIM39-211ENST00000458516 IGHV3-35A0A0C4DH35 117 aa12.9□□□□□ -0.34
TRIM39-211ENST00000458516 TREML4Q6UXN2 200 aa12.9□□□□□ -0.34
TRIM39-211ENST00000458516 ZNF546Q86UE3 836 aa12.9□□□□□ -0.34
TRIM39-211ENST00000458516 LINC00482Q8N8I6 264 aa12.9□□□□□ -0.34
TRIM39-211ENST00000458516 OR5C1Q8NGR4 320 aa12.9□□□□□ -0.34
TRIM39-211ENST00000458516 DLX4Q92988 240 aaPredicted RBP12.9□□□□□ -0.34
TRIM39-211ENST00000458516 TMEM147Q9BVK8 224 aa12.9□□□□□ -0.34
TRIM39-211ENST00000458516 TRRAPQ9Y4A5 3859 aa12.89□□□□□ -0.35
TRIM39-211ENST00000458516 DNHD1Q96M86 4753 aa12.89□□□□□ -0.35
TRIM39-211ENST00000458516 KLF5Q13887 457 aaPredicted RBP12.89□□□□□ -0.35
TRIM39-211ENST00000458516 CLINT1Q14677 625 aa12.89□□□□□ -0.35
TRIM39-211ENST00000458516 ATP6V1FQ16864 119 aa12.89□□□□□ -0.35
TRIM39-211ENST00000458516 GPHB5Q86YW7 130 aa12.89□□□□□ -0.35
TRIM39-211ENST00000458516 NEURL2Q9BR09 285 aa12.89□□□□□ -0.35
TRIM39-211ENST00000458516 NPVFQ9HCQ7 196 aa12.89□□□□□ -0.35
TRIM39-211ENST00000458516 UQCC1Q9NVA1 299 aa12.89□□□□□ -0.35
TRIM39-211ENST00000458516 CMYA5Q8N3K9 4069 aa12.88□□□□□ -0.35
TRIM39-211ENST00000458516 ZFP92A6NM28 416 aa12.88□□□□□ -0.35
TRIM39-211ENST00000458516 NDUFA4O00483 81 aa12.88□□□□□ -0.35
TRIM39-211ENST00000458516 SCGB2A1O75556 95 aa12.88□□□□□ -0.35
TRIM39-211ENST00000458516 NUP62P37198 522 aaPredicted RBP12.88□□□□□ -0.35
TRIM39-211ENST00000458516 SYNJ2BPP57105 145 aa12.88□□□□□ -0.35
TRIM39-211ENST00000458516 YPEL3P61236 119 aaPredicted RBP12.88□□□□□ -0.35
TRIM39-211ENST00000458516 RELQ04864 619 aaPredicted RBP12.88□□□□□ -0.35
TRIM39-211ENST00000458516 ZNF600Q6ZNG1 722 aa12.88□□□□□ -0.35
TRIM39-211ENST00000458516 C1QL4Q86Z23 238 aa12.88□□□□□ -0.35
TRIM39-211ENST00000458516 TRGV9Q99603 122 aa12.88□□□□□ -0.35
TRIM39-211ENST00000458516 SMIM3Q9BZL3 60 aa12.88□□□□□ -0.35
TRIM39-211ENST00000458516 LSM4Q9Y4Z0 139 aaKnown RBP12.88□□□□□ -0.35
TRIM39-211ENST00000458516 UBE2L5PA0A1B0GUS4 154 aa12.87□□□□□ -0.35
TRIM39-211ENST00000458516 ARPC5O15511 151 aa12.87□□□□□ -0.35
TRIM39-211ENST00000458516 ZNF90Q03938 601 aa12.87□□□□□ -0.35
TRIM39-211ENST00000458516 UNQ9165/PRO28630Q6UXU0 137 aa12.87□□□□□ -0.35
TRIM39-211ENST00000458516 REC114Q7Z4M0 266 aa12.87□□□□□ -0.35
TRIM39-211ENST00000458516 INO80EQ8NBZ0 244 aaPredicted RBP12.87□□□□□ -0.35
TRIM39-211ENST00000458516 TMEM190Q8WZ59 177 aa12.87□□□□□ -0.35
TRIM39-211ENST00000458516 RCC1LQ96I51 464 aaKnown RBP12.87□□□□□ -0.35
TRIM39-211ENST00000458516 ATP5SQ99766 215 aa12.87□□□□□ -0.35
TRIM39-211ENST00000458516 WFDC1Q9HC57 220 aa12.87□□□□□ -0.35
TRIM39-211ENST00000458516 FBXL17Q9UF56 701 aa12.87□□□□□ -0.35
TRIM39-211ENST00000458516 WDR83OSQ9Y284 106 aa12.87□□□□□ -0.35
TRIM39-211ENST00000458516 HMSDA8MTL9 139 aa12.86□□□□□ -0.35
TRIM39-211ENST00000458516 TOMM40O96008 361 aa12.86□□□□□ -0.35
TRIM39-211ENST00000458516 C1QBP02746 253 aa12.86□□□□□ -0.35
TRIM39-211ENST00000458516 FAM106AQ4KMX7 169 aa12.86□□□□□ -0.35
TRIM39-211ENST00000458516 TEPPQ6URK8 271 aa12.86□□□□□ -0.35
TRIM39-211ENST00000458516 MFFQ9GZY8 342 aa12.86□□□□□ -0.35
TRIM39-211ENST00000458516 ZFAND3Q9H8U3 227 aa12.86□□□□□ -0.35
TRIM39-211ENST00000458516 PUS1Q9Y606 427 aaKnown RBP eCLIP12.86□□□□□ -0.35
TRIM39-211ENST00000458516 LGALS9O00182 355 aa12.85□□□□□ -0.35
TRIM39-211ENST00000458516 OVOL1O14753 267 aa12.85□□□□□ -0.35
TRIM39-211ENST00000458516 AP2S1P53680 142 aaPredicted RBP12.85□□□□□ -0.35
TRIM39-211ENST00000458516 TOMM20LQ6UXN7 152 aa12.85□□□□□ -0.35
TRIM39-211ENST00000458516 MGST2Q99735 147 aa12.85□□□□□ -0.35
TRIM39-211ENST00000458516 IGHV3OR16-8A0A075B7F1 116 aa12.84□□□□□ -0.35
TRIM39-211ENST00000458516 A8MWP6 167 aa12.84□□□□□ -0.35
TRIM39-211ENST00000458516 DFFBO76075 338 aa12.84□□□□□ -0.35
TRIM39-211ENST00000458516 PSG1P11464 419 aa12.84□□□□□ -0.35
TRIM39-211ENST00000458516 ZNF345Q14585 488 aa12.84□□□□□ -0.35
TRIM39-211ENST00000458516 PRR31Q5SQ13 230 aa12.84□□□□□ -0.35
TRIM39-211ENST00000458516 BTNL8Q6UX41 500 aa12.84□□□□□ -0.35
TRIM39-211ENST00000458516 TMEM182Q6ZP80 229 aaPredicted RBP12.84□□□□□ -0.35
TRIM39-211ENST00000458516 CYP2G1PQ6ZSU1 146 aa12.84□□□□□ -0.35
TRIM39-211ENST00000458516 WFDC9Q8NEX5 89 aa12.84□□□□□ -0.35
TRIM39-211ENST00000458516 OR9G4Q8NGQ1 327 aa12.84□□□□□ -0.35
TRIM39-211ENST00000458516 ZNF320A2RRD8 509 aa12.83□□□□□ -0.36
TRIM39-211ENST00000458516 AGPAT2O15120 278 aa12.83□□□□□ -0.36
TRIM39-211ENST00000458516 YIF1AO95070 293 aa12.83□□□□□ -0.36
TRIM39-211ENST00000458516 FABP1P07148 127 aa12.83□□□□□ -0.36
TRIM39-211ENST00000458516 RD3LP0DJH9 198 aa12.83□□□□□ -0.36
TRIM39-211ENST00000458516 CXCL2P19875 107 aa12.83□□□□□ -0.36
TRIM39-211ENST00000458516 EDN2P20800 178 aa12.83□□□□□ -0.36
TRIM39-211ENST00000458516 FGF7P21781 194 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms