RNA–Protein interactions for RNA: ENST00000455996.6

TMEM220-202, Transcript of transmembrane protein 220, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM220, Length 1,402 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM220-202ENST00000455996 MFAP4P55083 255 aa12.63□□□□□ -0.39
TMEM220-202ENST00000455996 ZNF90Q03938 601 aa12.63□□□□□ -0.39
TMEM220-202ENST00000455996 LCN15Q6UWW0 184 aa12.63□□□□□ -0.39
TMEM220-202ENST00000455996 TXN2Q99757 166 aa12.63□□□□□ -0.39
TMEM220-202ENST00000455996 SLC25A22Q9H936 323 aa12.63□□□□□ -0.39
TMEM220-202ENST00000455996 YAE1D1Q9NRH1 226 aa12.63□□□□□ -0.39
TMEM220-202ENST00000455996 TRAV30A0A087WSZ9 112 aa12.62□□□□□ -0.39
TMEM220-202ENST00000455996 F8W735 103 aaPredicted RBP12.62□□□□□ -0.39
TMEM220-202ENST00000455996 H3BUA1 57 aa12.62□□□□□ -0.39
TMEM220-202ENST00000455996 AP4M1O00189 453 aa12.62□□□□□ -0.39
TMEM220-202ENST00000455996 HOXA3O43365 443 aaPredicted RBP12.62□□□□□ -0.39
TMEM220-202ENST00000455996 OR2J3O76001 311 aa12.62□□□□□ -0.39
TMEM220-202ENST00000455996 IGKV1-17P01599 117 aa12.62□□□□□ -0.39
TMEM220-202ENST00000455996 OR5G3P0C626 314 aa12.62□□□□□ -0.39
TMEM220-202ENST00000455996 GATA2P23769 480 aaPredicted RBP12.62□□□□□ -0.39
TMEM220-202ENST00000455996 PPIFP30405 207 aaKnown RBP12.62□□□□□ -0.39
TMEM220-202ENST00000455996 NPBWR1P48145 328 aa12.62□□□□□ -0.39
TMEM220-202ENST00000455996 PLP1P60201 277 aa12.62□□□□□ -0.39
TMEM220-202ENST00000455996 RHOBP62745 196 aa12.62□□□□□ -0.39
TMEM220-202ENST00000455996 SRSF3P84103 164 aaKnown RBP12.62□□□□□ -0.39
TMEM220-202ENST00000455996 C9orf152Q5JTZ5 239 aa12.62□□□□□ -0.39
TMEM220-202ENST00000455996 NECAP1Q8NC96 275 aa12.62□□□□□ -0.39
TMEM220-202ENST00000455996 GATAD1Q8WUU5 269 aa12.62□□□□□ -0.39
TMEM220-202ENST00000455996 SMDT1Q9H4I9 107 aa12.62□□□□□ -0.39
TMEM220-202ENST00000455996 C21orf62Q9NYP8 219 aa12.62□□□□□ -0.39
TMEM220-202ENST00000455996 FBXL7Q9UJT9 491 aa12.62□□□□□ -0.39
TMEM220-202ENST00000455996 ANK3Q12955 4377 aaKnown RBP12.62□□□□□ -0.39
TMEM220-202ENST00000455996 MYO9AB2RTY4 2548 aa12.62□□□□□ -0.39
TMEM220-202ENST00000455996 A0A1W2PPV4 95 aa12.62□□□□□ -0.39
TMEM220-202ENST00000455996 KRBOX1C9JBD0 128 aa12.62□□□□□ -0.39
TMEM220-202ENST00000455996 I3L521 148 aa12.62□□□□□ -0.39
TMEM220-202ENST00000455996 SRP14P37108 136 aaKnown RBP12.62□□□□□ -0.39
TMEM220-202ENST00000455996 RHOGP84095 191 aa12.62□□□□□ -0.39
TMEM220-202ENST00000455996 CFHR3Q02985 330 aa12.62□□□□□ -0.39
TMEM220-202ENST00000455996 GUK1Q16774 197 aa12.62□□□□□ -0.39
TMEM220-202ENST00000455996 Q6ZS46 218 aa12.62□□□□□ -0.39
TMEM220-202ENST00000455996 SIGLECL1Q8N7X8 197 aa12.62□□□□□ -0.39
TMEM220-202ENST00000455996 RNF2Q99496 336 aa12.62□□□□□ -0.39
TMEM220-202ENST00000455996 PBDC1Q9BVG4 233 aa12.62□□□□□ -0.39
TMEM220-202ENST00000455996 A0A1B0GV50 99 aa12.61□□□□□ -0.39
TMEM220-202ENST00000455996 FABP1P07148 127 aa12.61□□□□□ -0.39
TMEM220-202ENST00000455996 STAG3L2P0CL84 134 aa12.61□□□□□ -0.39
TMEM220-202ENST00000455996 STAG3L3P0CL85 134 aa12.61□□□□□ -0.39
TMEM220-202ENST00000455996 HNF1AP20823 631 aa12.61□□□□□ -0.39
TMEM220-202ENST00000455996 TOR2AQ5JU69 321 aa12.61□□□□□ -0.39
TMEM220-202ENST00000455996 IL17RELQ6ZVW7 336 aa12.61□□□□□ -0.39
TMEM220-202ENST00000455996 OR1L4Q8NGR5 311 aa12.61□□□□□ -0.39
TMEM220-202ENST00000455996 TMEM37Q8WXS4 190 aa12.61□□□□□ -0.39
TMEM220-202ENST00000455996 ATP6V0BQ99437 205 aa12.61□□□□□ -0.39
TMEM220-202ENST00000455996 SEPSECSQ9HD40 501 aaKnown RBP12.61□□□□□ -0.39
TMEM220-202ENST00000455996 FUT9Q9Y231 359 aa12.61□□□□□ -0.39
TMEM220-202ENST00000455996 NOTCH2Q04721 2471 aa12.61□□□□□ -0.39
TMEM220-202ENST00000455996 TLN2Q9Y4G6 2542 aa12.61□□□□□ -0.39
TMEM220-202ENST00000455996 RBFOX3A6NFN3 312 aa12.6□□□□□ -0.39
TMEM220-202ENST00000455996 FAM223BA6NKX1 122 aa12.6□□□□□ -0.39
TMEM220-202ENST00000455996 ZP3P21754 424 aa12.6□□□□□ -0.39
TMEM220-202ENST00000455996 FGF8P55075 233 aaPredicted RBP12.6□□□□□ -0.39
TMEM220-202ENST00000455996 YPEL3P61236 119 aaPredicted RBP12.6□□□□□ -0.39
TMEM220-202ENST00000455996 PEA15Q15121 130 aa12.6□□□□□ -0.39
TMEM220-202ENST00000455996 TIGITQ495A1 244 aa12.6□□□□□ -0.39
TMEM220-202ENST00000455996 ZNF506Q5JVG8 444 aa12.6□□□□□ -0.39
TMEM220-202ENST00000455996 FAM223AQ8IWN6 122 aa12.6□□□□□ -0.39
TMEM220-202ENST00000455996 ZNF502Q8TBZ5 544 aa12.6□□□□□ -0.39
TMEM220-202ENST00000455996 PFDN5Q99471 154 aa12.6□□□□□ -0.39
TMEM220-202ENST00000455996 MRPL32Q9BYC8 188 aaKnown RBP12.6□□□□□ -0.39
TMEM220-202ENST00000455996 GSX1Q9H4S2 264 aaPredicted RBP12.6□□□□□ -0.39
TMEM220-202ENST00000455996 DNAJC4Q9NNZ3 241 aa12.6□□□□□ -0.39
TMEM220-202ENST00000455996 ELOA3CA0A087WX78 387 aaPredicted RBP12.59□□□□□ -0.39
TMEM220-202ENST00000455996 TMEM218A2RU14 115 aa12.59□□□□□ -0.39
TMEM220-202ENST00000455996 EIF3GO75821 320 aaKnown RBP eCLIP12.59□□□□□ -0.39
TMEM220-202ENST00000455996 TOMM40O96008 361 aa12.59□□□□□ -0.39
TMEM220-202ENST00000455996 IGLV1-40P01703 118 aa12.59□□□□□ -0.39
TMEM220-202ENST00000455996 C15orf32Q32M92 178 aa12.59□□□□□ -0.39
TMEM220-202ENST00000455996 SPATA31B1PQ5VZV4 182 aa12.59□□□□□ -0.39
TMEM220-202ENST00000455996 PATE2Q6UY27 113 aa12.59□□□□□ -0.39
TMEM220-202ENST00000455996 Q8N2B8 174 aa12.59□□□□□ -0.39
TMEM220-202ENST00000455996 PRSS22Q9GZN4 317 aa12.59□□□□□ -0.39
TMEM220-202ENST00000455996 NPFFR1Q9GZQ6 430 aa12.59□□□□□ -0.39
TMEM220-202ENST00000455996 ACANP16112 2415 aa12.58□□□□□ -0.39
TMEM220-202ENST00000455996 LOC102723971A0A1B0GUV8 181 aa12.58□□□□□ -0.4
TMEM220-202ENST00000455996 C9JQL5 133 aa12.58□□□□□ -0.4
TMEM220-202ENST00000455996 GNG7O60262 68 aa12.58□□□□□ -0.4
TMEM220-202ENST00000455996 NDUFS6O75380 124 aaKnown RBP12.58□□□□□ -0.4
TMEM220-202ENST00000455996 CXorf1O96002 111 aa12.58□□□□□ -0.4
TMEM220-202ENST00000455996 PSG1P11464 419 aa12.58□□□□□ -0.4
TMEM220-202ENST00000455996 PSMB3P49720 205 aa12.58□□□□□ -0.4
TMEM220-202ENST00000455996 KHDC3LQ587J8 217 aa12.58□□□□□ -0.4
TMEM220-202ENST00000455996 FAM78BQ5VT40 261 aa12.58□□□□□ -0.4
TMEM220-202ENST00000455996 MIR17HGQ75NE6 70 aa12.58□□□□□ -0.4
TMEM220-202ENST00000455996 NOL4LQ96MY1 436 aaPredicted RBP12.58□□□□□ -0.4
TMEM220-202ENST00000455996 LINC00052Q96N35 136 aa12.58□□□□□ -0.4
TMEM220-202ENST00000455996 ZNF702PQ9H963 129 aa12.58□□□□□ -0.4
TMEM220-202ENST00000455996 TREM1Q9NP99 234 aa12.58□□□□□ -0.4
TMEM220-202ENST00000455996 ZNF355PQ9NSJ1 428 aa12.58□□□□□ -0.4
TMEM220-202ENST00000455996 GAR1Q9NY12 217 aaKnown RBP12.58□□□□□ -0.4
TMEM220-202ENST00000455996 LINC00527Q9UJ94 153 aa12.58□□□□□ -0.4
TMEM220-202ENST00000455996 SETXQ7Z333 2677 aaKnown RBP12.58□□□□□ -0.4
TMEM220-202ENST00000455996 TRBV7-1A0A0A6YYK4 115 aa12.57□□□□□ -0.4
TMEM220-202ENST00000455996 TMEM89A2RUT3 159 aa12.57□□□□□ -0.4
TMEM220-202ENST00000455996 HMGB3O15347 200 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms