RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 C10orf91Q5T1B1 145 aa4.4□□□□□ -1.71
CSMD3-204ENST00000455883 SRSF12Q8WXF0 261 aaKnown RBP4.4□□□□□ -1.71
CSMD3-204ENST00000455883 CISD3P0C7P0 127 aa4.4□□□□□ -1.71
CSMD3-204ENST00000455883 MINOS1Q5TGZ0 78 aa4.4□□□□□ -1.71
CSMD3-204ENST00000455883 LILRA6Q6PI73 481 aa4.4□□□□□ -1.71
CSMD3-204ENST00000455883 WFDC6Q9BQY6 131 aa4.4□□□□□ -1.71
CSMD3-204ENST00000455883 MINOS1-NBL1R4GNA1 71 aa4.4□□□□□ -1.71
CSMD3-204ENST00000455883 PSMB11A5LHX3 300 aa4.39□□□□□ -1.71
CSMD3-204ENST00000455883 TMEM229AB2RXF0 380 aa4.39□□□□□ -1.71
CSMD3-204ENST00000455883 EIF4EBP2Q13542 120 aaPredicted RBP4.39□□□□□ -1.71
CSMD3-204ENST00000455883 ASCL4Q6XD76 172 aa4.39□□□□□ -1.71
CSMD3-204ENST00000455883 LINC01555Q8NAE3 123 aa4.39□□□□□ -1.71
CSMD3-204ENST00000455883 WIPF2Q8TF74 440 aaPredicted RBP4.39□□□□□ -1.71
CSMD3-204ENST00000455883 MRPS18BQ9Y676 258 aaKnown RBP4.39□□□□□ -1.71
CSMD3-204ENST00000455883 LHFPL6Q9Y693 200 aa4.39□□□□□ -1.71
CSMD3-204ENST00000455883 ATOX1O00244 68 aa4.39□□□□□ -1.71
CSMD3-204ENST00000455883 NEU1Q99519 415 aa4.39□□□□□ -1.71
CSMD3-204ENST00000455883 GGTLC1Q9BX51 225 aa4.39□□□□□ -1.71
CSMD3-204ENST00000455883 PGPEP1Q9NXJ5 209 aa4.39□□□□□ -1.71
CSMD3-204ENST00000455883 PILRBQ9UKJ0 227 aa4.39□□□□□ -1.71
CSMD3-204ENST00000455883 STAB2Q8WWQ8 2551 aa4.39□□□□□ -1.71
CSMD3-204ENST00000455883 STAB1Q9NY15 2570 aa4.39□□□□□ -1.71
CSMD3-204ENST00000455883 TRBV7-1A0A0A6YYK4 115 aa4.39□□□□□ -1.71
CSMD3-204ENST00000455883 PRSS47A8MTI9 375 aa4.39□□□□□ -1.71
CSMD3-204ENST00000455883 MGPP08493 103 aa4.39□□□□□ -1.71
CSMD3-204ENST00000455883 CDKN1BP46527 198 aa4.39□□□□□ -1.71
CSMD3-204ENST00000455883 COA6Q5JTJ3 125 aaKnown RBP4.39□□□□□ -1.71
CSMD3-204ENST00000455883 PILRAQ9UKJ1 303 aa4.39□□□□□ -1.71
CSMD3-204ENST00000455883 MOSP00540 346 aa4.39□□□□□ -1.71
CSMD3-204ENST00000455883 NANOS3P60323 173 aaKnown RBP4.39□□□□□ -1.71
CSMD3-204ENST00000455883 NOTCH1P46531 2555 aa4.39□□□□□ -1.71
CSMD3-204ENST00000455883 PRRT4C9JH25 899 aa4.39□□□□□ -1.71
CSMD3-204ENST00000455883 HGFACQ04756 655 aa4.39□□□□□ -1.71
CSMD3-204ENST00000455883 DPM3Q9P2X0 92 aa4.39□□□□□ -1.71
CSMD3-204ENST00000455883 SELLP14151 372 aa4.39□□□□□ -1.71
CSMD3-204ENST00000455883 DRD3P35462 400 aa4.39□□□□□ -1.71
CSMD3-204ENST00000455883 TMEM75Q8N9X5 138 aa4.39□□□□□ -1.71
CSMD3-204ENST00000455883 RTN4RQ9BZR6 473 aa4.39□□□□□ -1.71
CSMD3-204ENST00000455883 NPFFR1Q9GZQ6 430 aa4.39□□□□□ -1.71
CSMD3-204ENST00000455883 C21orf62Q9NYP8 219 aa4.39□□□□□ -1.71
CSMD3-204ENST00000455883 FOXI3A8MTJ6 420 aaPredicted RBP4.39□□□□□ -1.71
CSMD3-204ENST00000455883 SERF1AO75920 110 aa4.39□□□□□ -1.71
CSMD3-204ENST00000455883 PGPA6NDG6 321 aa4.39□□□□□ -1.71
CSMD3-204ENST00000455883 NDUFC1O43677 76 aa4.39□□□□□ -1.71
CSMD3-204ENST00000455883 SH2D6Q7Z4S9 175 aa4.39□□□□□ -1.71
CSMD3-204ENST00000455883 EAF1Q96JC9 268 aaPredicted RBP4.39□□□□□ -1.71
CSMD3-204ENST00000455883 BPTFQ12830 3046 aa4.39□□□□□ -1.71
CSMD3-204ENST00000455883 CCL3L1P16619 93 aa4.39□□□□□ -1.71
CSMD3-204ENST00000455883 BVES-AS1Q5T3Y7 98 aa4.39□□□□□ -1.71
CSMD3-204ENST00000455883 C18orf12Q96KH6 178 aa4.39□□□□□ -1.71
CSMD3-204ENST00000455883 ZNF492Q9P255 531 aa4.39□□□□□ -1.71
CSMD3-204ENST00000455883 TNFRSF6BO95407 300 aa4.39□□□□□ -1.71
CSMD3-204ENST00000455883 LINC00114Q6XXX2 140 aa4.39□□□□□ -1.71
CSMD3-204ENST00000455883 MSL2Q9HCI7 577 aa4.39□□□□□ -1.71
CSMD3-204ENST00000455883 ICAM4Q14773 271 aa4.38□□□□□ -1.71
CSMD3-204ENST00000455883 DCAF12L2Q5VW00 463 aa4.38□□□□□ -1.71
CSMD3-204ENST00000455883 NRSN2Q9GZP1 204 aa4.38□□□□□ -1.71
CSMD3-204ENST00000455883 TNFRSF12AQ9NP84 129 aa4.38□□□□□ -1.71
CSMD3-204ENST00000455883 FLNBO75369 2602 aaKnown RBP4.38□□□□□ -1.71
CSMD3-204ENST00000455883 LYRM9A8MSI8 78 aa4.38□□□□□ -1.71
CSMD3-204ENST00000455883 NXPH3O95157 252 aa4.38□□□□□ -1.71
CSMD3-204ENST00000455883 WNT2P09544 360 aa4.38□□□□□ -1.71
CSMD3-204ENST00000455883 PRR7Q8TB68 274 aa4.38□□□□□ -1.71
CSMD3-204ENST00000455883 A0A1W2PPI3 338 aa4.38□□□□□ -1.71
CSMD3-204ENST00000455883 J3KT08 172 aa4.38□□□□□ -1.71
CSMD3-204ENST00000455883 HOXB3P14651 431 aaPredicted RBP4.38□□□□□ -1.71
CSMD3-204ENST00000455883 COLCA2A8K830 154 aa4.38□□□□□ -1.71
CSMD3-204ENST00000455883 SPRY3O43610 288 aa4.38□□□□□ -1.71
CSMD3-204ENST00000455883 RPL23P62829 140 aaKnown RBP4.38□□□□□ -1.71
CSMD3-204ENST00000455883 LINC01590Q5TEZ4 76 aa4.38□□□□□ -1.71
CSMD3-204ENST00000455883 GOLT1AQ6ZVE7 132 aa4.38□□□□□ -1.71
CSMD3-204ENST00000455883 SYS1-DBNDD2H3BUS1 97 aa4.38□□□□□ -1.71
CSMD3-204ENST00000455883 GAGE12JA6NER3 117 aa4.38□□□□□ -1.71
CSMD3-204ENST00000455883 GAGE7O76087 117 aa4.38□□□□□ -1.71
CSMD3-204ENST00000455883 IGLV3-19P01714 112 aa4.38□□□□□ -1.71
CSMD3-204ENST00000455883 GAGE12FP0CL80 117 aa4.38□□□□□ -1.71
CSMD3-204ENST00000455883 GAGE12GP0CL81 117 aa4.38□□□□□ -1.71
CSMD3-204ENST00000455883 GAGE12IP0CL82 117 aa4.38□□□□□ -1.71
CSMD3-204ENST00000455883 KLK2P20151 261 aa4.38□□□□□ -1.71
CSMD3-204ENST00000455883 GAGE4Q13068 117 aa4.38□□□□□ -1.71
CSMD3-204ENST00000455883 RTP5Q14D33 572 aa4.38□□□□□ -1.71
CSMD3-204ENST00000455883 TMEM14EPQ6UXP3 125 aa4.38□□□□□ -1.71
CSMD3-204ENST00000455883 VWC2LB2RUY7 222 aa4.38□□□□□ -1.71
CSMD3-204ENST00000455883 CDAP32320 146 aa4.38□□□□□ -1.71
CSMD3-204ENST00000455883 PIGYQ3MUY2 71 aa4.38□□□□□ -1.71
CSMD3-204ENST00000455883 LY6G5BQ8NDX9 201 aa4.38□□□□□ -1.71
CSMD3-204ENST00000455883 ZPLD1Q8TCW7 415 aa4.38□□□□□ -1.71
CSMD3-204ENST00000455883 CCL17Q92583 94 aa4.38□□□□□ -1.71
CSMD3-204ENST00000455883 ZNF775Q96BV0 537 aaPredicted RBP4.38□□□□□ -1.71
CSMD3-204ENST00000455883 TRAV8-1A0A0A6YYK1 113 aa4.38□□□□□ -1.71
CSMD3-204ENST00000455883 CRXO43186 299 aaPredicted RBP4.38□□□□□ -1.71
CSMD3-204ENST00000455883 WDR82Q6UXN9 313 aa4.38□□□□□ -1.71
CSMD3-204ENST00000455883 LHFPL1Q86WI0 220 aa4.38□□□□□ -1.71
CSMD3-204ENST00000455883 NEUROG3Q9Y4Z2 214 aa4.38□□□□□ -1.71
CSMD3-204ENST00000455883 SPINK4O60575 86 aa4.38□□□□□ -1.71
CSMD3-204ENST00000455883 CDK2AP2O75956 126 aa4.38□□□□□ -1.71
CSMD3-204ENST00000455883 ACP7Q6ZNF0 438 aa4.38□□□□□ -1.71
CSMD3-204ENST00000455883 TEX43Q6ZNM6 134 aa4.38□□□□□ -1.71
CSMD3-204ENST00000455883 FBXL15Q9H469 300 aa4.38□□□□□ -1.71
CSMD3-204ENST00000455883 TRAV8-6A0A0B4J262 113 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms