RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 SMPXQ9UHP9 88 aa10.64□□□□□ -0.71
HDAC4-205ENST00000454542 RCL1Q9Y2P8 373 aaKnown RBP10.64□□□□□ -0.71
HDAC4-205ENST00000454542 CHEK1O14757 476 aa10.63□□□□□ -0.71
HDAC4-205ENST00000454542 TSPAN4O14817 238 aa10.63□□□□□ -0.71
HDAC4-205ENST00000454542 ZNF207O43670 478 aaKnown RBP10.63□□□□□ -0.71
HDAC4-205ENST00000454542 IGHV4-30-4P0DP06 118 aa10.63□□□□□ -0.71
HDAC4-205ENST00000454542 YPEL3P61236 119 aaPredicted RBP10.63□□□□□ -0.71
HDAC4-205ENST00000454542 POLR2GP62487 172 aaKnown RBP eCLIP10.63□□□□□ -0.71
HDAC4-205ENST00000454542 TIGITQ495A1 244 aa10.63□□□□□ -0.71
HDAC4-205ENST00000454542 GTSCR1Q86UQ5 136 aa10.63□□□□□ -0.71
HDAC4-205ENST00000454542 VSIRQ9H7M9 311 aa10.63□□□□□ -0.71
HDAC4-205ENST00000454542 WRBO00258 174 aa10.62□□□□□ -0.71
HDAC4-205ENST00000454542 CCSO14618 274 aa10.62□□□□□ -0.71
HDAC4-205ENST00000454542 YIF1AO95070 293 aa10.62□□□□□ -0.71
HDAC4-205ENST00000454542 IFNA4P05014 189 aa10.62□□□□□ -0.71
HDAC4-205ENST00000454542 FRMD6-AS1P0C7T7 363 aa10.62□□□□□ -0.71
HDAC4-205ENST00000454542 OR10J1P30954 320 aa10.62□□□□□ -0.71
HDAC4-205ENST00000454542 PAX9P55771 341 aa10.62□□□□□ -0.71
HDAC4-205ENST00000454542 CD81P60033 236 aa10.62□□□□□ -0.71
HDAC4-205ENST00000454542 RAB11AP62491 216 aa10.62□□□□□ -0.71
HDAC4-205ENST00000454542 C12orf45Q8N5I9 185 aaPredicted RBP10.62□□□□□ -0.71
HDAC4-205ENST00000454542 NPIPB3Q92617 1050 aa10.62□□□□□ -0.71
HDAC4-205ENST00000454542 SPAG8Q99932 426 aaPredicted RBP10.62□□□□□ -0.71
HDAC4-205ENST00000454542 MARVELD1Q9BSK0 173 aa10.62□□□□□ -0.71
HDAC4-205ENST00000454542 IGKV1D-37A0A075B6S9 117 aa10.61□□□□□ -0.71
HDAC4-205ENST00000454542 TRAV14DV4A0A0A6YYC5 116 aa10.61□□□□□ -0.71
HDAC4-205ENST00000454542 PMS2P5A8MQ11 134 aa10.61□□□□□ -0.71
HDAC4-205ENST00000454542 H3BP45 60 aa10.61□□□□□ -0.71
HDAC4-205ENST00000454542 SSSCA1O60232 199 aa10.61□□□□□ -0.71
HDAC4-205ENST00000454542 PRAF2O60831 178 aa10.61□□□□□ -0.71
HDAC4-205ENST00000454542 TOMM40O96008 361 aa10.61□□□□□ -0.71
HDAC4-205ENST00000454542 CD7P09564 240 aa10.61□□□□□ -0.71
HDAC4-205ENST00000454542 CRYBB3P26998 211 aa10.61□□□□□ -0.71
HDAC4-205ENST00000454542 DEFA1P59665 94 aa10.61□□□□□ -0.71
HDAC4-205ENST00000454542 DEFA3P59666 94 aa10.61□□□□□ -0.71
HDAC4-205ENST00000454542 RPP30P78346 268 aaKnown RBP10.61□□□□□ -0.71
HDAC4-205ENST00000454542 GAMTQ14353 236 aa10.61□□□□□ -0.71
HDAC4-205ENST00000454542 FAM90A2PQ658T7 463 aa10.61□□□□□ -0.71
HDAC4-205ENST00000454542 THAP8Q8NA92 274 aa10.61□□□□□ -0.71
HDAC4-205ENST00000454542 ACY3Q96HD9 319 aa10.61□□□□□ -0.71
HDAC4-205ENST00000454542 SLC35E1Q96K37 410 aa10.61□□□□□ -0.71
HDAC4-205ENST00000454542 SMIM8Q96KF7 97 aa10.61□□□□□ -0.71
HDAC4-205ENST00000454542 NEURL2Q9BR09 285 aa10.61□□□□□ -0.71
HDAC4-205ENST00000454542 RHPN1-AS1Q9BWJ2 59 aa10.61□□□□□ -0.71
HDAC4-205ENST00000454542 C11orf1Q9H5F2 150 aa10.61□□□□□ -0.71
HDAC4-205ENST00000454542 SELENOKQ9Y6D0 94 aa10.61□□□□□ -0.71
HDAC4-205ENST00000454542 SNRPGP15A8MWD9 76 aa10.6□□□□□ -0.71
HDAC4-205ENST00000454542 TSC22D2O75157 780 aa10.6□□□□□ -0.71
HDAC4-205ENST00000454542 MBPP02686 304 aaPredicted RBP10.6□□□□□ -0.71
HDAC4-205ENST00000454542 TAS2R30P59541 319 aa10.6□□□□□ -0.71
HDAC4-205ENST00000454542 IL15RAQ13261 267 aa10.6□□□□□ -0.71
HDAC4-205ENST00000454542 GUCA2BQ16661 112 aa10.6□□□□□ -0.71
HDAC4-205ENST00000454542 TMEM14EPQ6UXP3 125 aa10.6□□□□□ -0.71
HDAC4-205ENST00000454542 ST8SIA2Q92186 375 aa10.6□□□□□ -0.71
HDAC4-205ENST00000454542 RAB40CQ96S21 281 aa10.6□□□□□ -0.71
HDAC4-205ENST00000454542 RNF2Q99496 336 aa10.6□□□□□ -0.71
HDAC4-205ENST00000454542 STRAPQ9Y3F4 350 aaKnown RBP10.6□□□□□ -0.71
HDAC4-205ENST00000454542 U3KQE9 123 aa10.6□□□□□ -0.71
HDAC4-205ENST00000454542 IGKV1OR2-108A0A075B7D4 117 aa10.59□□□□□ -0.71
HDAC4-205ENST00000454542 APOHP02749 345 aaPredicted RBP10.59□□□□□ -0.71
HDAC4-205ENST00000454542 NHLRC4P0CG21 123 aaPredicted RBP10.59□□□□□ -0.71
HDAC4-205ENST00000454542 BMI1P35226 326 aa10.59□□□□□ -0.71
HDAC4-205ENST00000454542 SPANXN5Q5MJ07 72 aa10.59□□□□□ -0.71
HDAC4-205ENST00000454542 LAMTOR1Q6IAA8 161 aa10.59□□□□□ -0.71
HDAC4-205ENST00000454542 LINC00322Q6ZN03 302 aaPredicted RBP10.59□□□□□ -0.71
HDAC4-205ENST00000454542 RBPMS2Q6ZRY4 209 aaKnown RBP10.59□□□□□ -0.71
HDAC4-205ENST00000454542 FAM110AQ9BQ89 295 aa10.59□□□□□ -0.71
HDAC4-205ENST00000454542 WFDC10AQ9H1F0 79 aa10.59□□□□□ -0.71
HDAC4-205ENST00000454542 IGHV3-49A0A0A0MS15 119 aa10.58□□□□□ -0.72
HDAC4-205ENST00000454542 INMT-MINDY4F8WBC2 141 aa10.58□□□□□ -0.72
HDAC4-205ENST00000454542 SCGB1D2O95969 90 aa10.58□□□□□ -0.72
HDAC4-205ENST00000454542 CD5P06127 495 aa10.58□□□□□ -0.72
HDAC4-205ENST00000454542 USF2Q15853 346 aaPredicted RBP10.58□□□□□ -0.72
HDAC4-205ENST00000454542 ODF3L2Q3SX64 289 aa10.58□□□□□ -0.72
HDAC4-205ENST00000454542 ACOT7LQ6ZUV0 252 aa10.58□□□□□ -0.72
HDAC4-205ENST00000454542 SBSPONQ8IVN8 264 aa10.58□□□□□ -0.72
HDAC4-205ENST00000454542 C2orf50Q96LR7 162 aa10.58□□□□□ -0.72
HDAC4-205ENST00000454542 METTL26Q96S19 204 aa10.58□□□□□ -0.72
HDAC4-205ENST00000454542 TRGV9Q99603 122 aa10.58□□□□□ -0.72
HDAC4-205ENST00000454542 GPN1Q9HCN4 374 aaPredicted RBP10.58□□□□□ -0.72
HDAC4-205ENST00000454542 PSENENQ9NZ42 101 aa10.58□□□□□ -0.72
HDAC4-205ENST00000454542 DNAH7Q8WXX0 4024 aa10.57□□□□□ -0.72
HDAC4-205ENST00000454542 C7orf66A4D0T2 115 aa10.57□□□□□ -0.72
HDAC4-205ENST00000454542 FNDC10F2Z333 226 aa10.57□□□□□ -0.72
HDAC4-205ENST00000454542 K7EPK0 472 aa10.57□□□□□ -0.72
HDAC4-205ENST00000454542 IL4P05112 153 aa10.57□□□□□ -0.72
HDAC4-205ENST00000454542 PSG1P11464 419 aa10.57□□□□□ -0.72
HDAC4-205ENST00000454542 LILRB2Q8N423 598 aa10.57□□□□□ -0.72
HDAC4-205ENST00000454542 Q8WTZ3 238 aa10.57□□□□□ -0.72
HDAC4-205ENST00000454542 TM2D3Q9BRN9 247 aa10.57□□□□□ -0.72
HDAC4-205ENST00000454542 TMEM231Q9H6L2 316 aa10.57□□□□□ -0.72
HDAC4-205ENST00000454542 GSKIPQ9P0R6 139 aa10.57□□□□□ -0.72
HDAC4-205ENST00000454542 IGHV3OR16-13A0A075B7E8 117 aa10.56□□□□□ -0.72
HDAC4-205ENST00000454542 IGHV3-74A0A0B4J1X5 117 aa10.56□□□□□ -0.72
HDAC4-205ENST00000454542 TRAV2A0A0B4J234 112 aa10.56□□□□□ -0.72
HDAC4-205ENST00000454542 OR4C46A6NHA9 309 aa10.56□□□□□ -0.72
HDAC4-205ENST00000454542 ZFP92A6NM28 416 aa10.56□□□□□ -0.72
HDAC4-205ENST00000454542 OR11H12B2RN74 326 aa10.56□□□□□ -0.72
HDAC4-205ENST00000454542 CCNKO75909 580 aa10.56□□□□□ -0.72
HDAC4-205ENST00000454542 HNRNPCP07910 306 aaKnown RBP eCLIP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms