RNA–Protein interactions for RNA: ENST00000453306.4

VCX3B-204, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-204ENST00000453306 NHLH2Q02577 135 aa11.95□□□□□ -0.5
VCX3B-204ENST00000453306 Q56UQ5 140 aa11.95□□□□□ -0.5
VCX3B-204ENST00000453306 OR8G2PQ6IF36 304 aa11.95□□□□□ -0.5
VCX3B-204ENST00000453306 NOXA1Q86UR1 476 aa11.95□□□□□ -0.5
VCX3B-204ENST00000453306 UBAC2Q8NBM4 344 aa11.95□□□□□ -0.5
VCX3B-204ENST00000453306 WWC2-AS2Q96NR7 200 aa11.95□□□□□ -0.5
VCX3B-204ENST00000453306 B9D2Q9BPU9 175 aa11.95□□□□□ -0.5
VCX3B-204ENST00000453306 E5RGE8 158 aa11.94□□□□□ -0.5
VCX3B-204ENST00000453306 CLN5O75503 358 aa11.94□□□□□ -0.5
VCX3B-204ENST00000453306 IGLC1P0CG04 106 aa11.94□□□□□ -0.5
VCX3B-204ENST00000453306 ARL3P36405 182 aa11.94□□□□□ -0.5
VCX3B-204ENST00000453306 P2RY1P47900 373 aa11.94□□□□□ -0.5
VCX3B-204ENST00000453306 RPP30P78346 268 aaKnown RBP11.94□□□□□ -0.5
VCX3B-204ENST00000453306 CD300CQ08708 224 aa11.94□□□□□ -0.5
VCX3B-204ENST00000453306 UNQ9165/PRO28630Q6UXU0 137 aa11.94□□□□□ -0.5
VCX3B-204ENST00000453306 IL34Q6ZMJ4 242 aa11.94□□□□□ -0.5
VCX3B-204ENST00000453306 ACOT7LQ6ZUV0 252 aa11.94□□□□□ -0.5
VCX3B-204ENST00000453306 OR2T35Q8NGX2 323 aa11.94□□□□□ -0.5
VCX3B-204ENST00000453306 CACNG8Q8WXS5 425 aa11.94□□□□□ -0.5
VCX3B-204ENST00000453306 ACY3Q96HD9 319 aa11.94□□□□□ -0.5
VCX3B-204ENST00000453306 TXN2Q99757 166 aa11.94□□□□□ -0.5
VCX3B-204ENST00000453306 GGCTO75223 188 aaKnown RBP11.93□□□□□ -0.5
VCX3B-204ENST00000453306 RLN2P04090 185 aa11.93□□□□□ -0.5
VCX3B-204ENST00000453306 SLC25A4P12235 298 aa11.93□□□□□ -0.5
VCX3B-204ENST00000453306 EWSR1Q01844 656 aaKnown RBP eCLIP11.93□□□□□ -0.5
VCX3B-204ENST00000453306 TIGITQ495A1 244 aa11.93□□□□□ -0.5
VCX3B-204ENST00000453306 ADAMTSL5Q6ZMM2 481 aa11.93□□□□□ -0.5
VCX3B-204ENST00000453306 TMEM182Q6ZP80 229 aaPredicted RBP11.93□□□□□ -0.5
VCX3B-204ENST00000453306 TMEM217Q8N7C4 229 aa11.93□□□□□ -0.5
VCX3B-204ENST00000453306 OR11H4Q8NGC9 324 aa11.93□□□□□ -0.5
VCX3B-204ENST00000453306 ATP6V0BQ99437 205 aa11.93□□□□□ -0.5
VCX3B-204ENST00000453306 RPS10-NUDT3A0A1W2PQS6 291 aa11.92□□□□□ -0.5
VCX3B-204ENST00000453306 PVALBP20472 110 aaPredicted RBP11.92□□□□□ -0.5
VCX3B-204ENST00000453306 SYNJ2BPP57105 145 aa11.92□□□□□ -0.5
VCX3B-204ENST00000453306 KMT2CQ8NEZ4 4911 aaKnown RBP11.92□□□□□ -0.5
VCX3B-204ENST00000453306 TENM3Q9P273 2699 aa11.92□□□□□ -0.5
VCX3B-204ENST00000453306 IGHV3OR16-8A0A075B7F1 116 aa11.91□□□□□ -0.5
VCX3B-204ENST00000453306 GNG7O60262 68 aa11.91□□□□□ -0.5
VCX3B-204ENST00000453306 NHLRC4P0CG21 123 aaPredicted RBP11.91□□□□□ -0.5
VCX3B-204ENST00000453306 NPBWR1P48145 328 aa11.91□□□□□ -0.5
VCX3B-204ENST00000453306 SULT1A1P50225 295 aa11.91□□□□□ -0.5
VCX3B-204ENST00000453306 DLK1P80370 383 aa11.91□□□□□ -0.5
VCX3B-204ENST00000453306 ZNF90Q03938 601 aa11.91□□□□□ -0.5
VCX3B-204ENST00000453306 GPHB5Q86YW7 130 aa11.91□□□□□ -0.5
VCX3B-204ENST00000453306 THAP8Q8NA92 274 aa11.91□□□□□ -0.5
VCX3B-204ENST00000453306 OR10P1Q8NGE3 313 aa11.91□□□□□ -0.5
VCX3B-204ENST00000453306 ASB13Q8WXK3 278 aa11.91□□□□□ -0.5
VCX3B-204ENST00000453306 WFDC1Q9HC57 220 aa11.91□□□□□ -0.5
VCX3B-204ENST00000453306 ZP3P21754 424 aa11.9□□□□□ -0.5
VCX3B-204ENST00000453306 RPL12P30050 165 aaKnown RBP11.9□□□□□ -0.5
VCX3B-204ENST00000453306 OR10J1P30954 320 aa11.9□□□□□ -0.5
VCX3B-204ENST00000453306 SLC38A11Q08AI6 406 aa11.9□□□□□ -0.5
VCX3B-204ENST00000453306 VWC2Q2TAL6 325 aa11.9□□□□□ -0.5
VCX3B-204ENST00000453306 FAM209BQ5JX69 171 aa11.9□□□□□ -0.5
VCX3B-204ENST00000453306 ETFRF1Q6IPR1 90 aa11.9□□□□□ -0.5
VCX3B-204ENST00000453306 SPSB3Q6PJ21 355 aa11.9□□□□□ -0.5
VCX3B-204ENST00000453306 RNF222A6NCQ9 220 aa11.89□□□□□ -0.51
VCX3B-204ENST00000453306 NUPL2O15504 423 aaKnown RBP11.89□□□□□ -0.51
VCX3B-204ENST00000453306 RPEL1Q2QD12 228 aa11.89□□□□□ -0.51
VCX3B-204ENST00000453306 TM4SF20Q53R12 229 aa11.89□□□□□ -0.51
VCX3B-204ENST00000453306 TOMM20LQ6UXN7 152 aa11.89□□□□□ -0.51
VCX3B-204ENST00000453306 TMEM144Q7Z5S9 345 aa11.89□□□□□ -0.51
VCX3B-204ENST00000453306 THAP6Q8TBB0 222 aa11.89□□□□□ -0.51
VCX3B-204ENST00000453306 SLC35E1Q96K37 410 aa11.89□□□□□ -0.51
VCX3B-204ENST00000453306 ZFAND3Q9H8U3 227 aa11.89□□□□□ -0.51
VCX3B-204ENST00000453306 LSM4Q9Y4Z0 139 aaKnown RBP11.89□□□□□ -0.51
VCX3B-204ENST00000453306 HSPB11Q9Y547 144 aa11.89□□□□□ -0.51
VCX3B-204ENST00000453306 TMEM213A2RRL7 107 aa11.88□□□□□ -0.51
VCX3B-204ENST00000453306 OVOL1O14753 267 aa11.88□□□□□ -0.51
VCX3B-204ENST00000453306 GATA2P23769 480 aaPredicted RBP11.88□□□□□ -0.51
VCX3B-204ENST00000453306 OR1S2Q8NGQ3 325 aa11.88□□□□□ -0.51
VCX3B-204ENST00000453306 GGACTQ9BVM4 153 aa11.88□□□□□ -0.51
VCX3B-204ENST00000453306 SLC25A31Q9H0C2 315 aa11.88□□□□□ -0.51
VCX3B-204ENST00000453306 TNFSF18Q9UNG2 199 aa11.88□□□□□ -0.51
VCX3B-204ENST00000453306 SELENOKQ9Y6D0 94 aa11.88□□□□□ -0.51
VCX3B-204ENST00000453306 FXYD6-FXYD2A0A087WZ82 144 aa11.87□□□□□ -0.51
VCX3B-204ENST00000453306 FNDC10F2Z333 226 aa11.87□□□□□ -0.51
VCX3B-204ENST00000453306 LGALS9O00182 355 aa11.87□□□□□ -0.51
VCX3B-204ENST00000453306 ZNF207O43670 478 aaKnown RBP11.87□□□□□ -0.51
VCX3B-204ENST00000453306 CSN3P07498 182 aa11.87□□□□□ -0.51
VCX3B-204ENST00000453306 PET100P0DJ07 73 aa11.87□□□□□ -0.51
VCX3B-204ENST00000453306 PSG1P11464 419 aa11.87□□□□□ -0.51
VCX3B-204ENST00000453306 S100A11P31949 105 aa11.87□□□□□ -0.51
VCX3B-204ENST00000453306 YPEL3P61236 119 aaPredicted RBP11.87□□□□□ -0.51
VCX3B-204ENST00000453306 FGL1Q08830 312 aa11.87□□□□□ -0.51
VCX3B-204ENST00000453306 OR2F1Q13607 317 aa11.87□□□□□ -0.51
VCX3B-204ENST00000453306 OR5C1Q8NGR4 320 aa11.87□□□□□ -0.51
VCX3B-204ENST00000453306 TMEM190Q8WZ59 177 aa11.87□□□□□ -0.51
VCX3B-204ENST00000453306 AQP10Q96PS8 301 aa11.87□□□□□ -0.51
VCX3B-204ENST00000453306 TRGV9Q99603 122 aa11.87□□□□□ -0.51
VCX3B-204ENST00000453306 NEURL2Q9BR09 285 aa11.87□□□□□ -0.51
VCX3B-204ENST00000453306 SMIM3Q9BZL3 60 aa11.87□□□□□ -0.51
VCX3B-204ENST00000453306 GAR1Q9NY12 217 aaKnown RBP11.87□□□□□ -0.51
VCX3B-204ENST00000453306 PUS1Q9Y606 427 aaKnown RBP eCLIP11.87□□□□□ -0.51
VCX3B-204ENST00000453306 COL7A1Q02388 2944 aa11.87□□□□□ -0.51
VCX3B-204ENST00000453306 TRAV30A0A087WSZ9 112 aa11.86□□□□□ -0.51
VCX3B-204ENST00000453306 ZNF320A2RRD8 509 aa11.86□□□□□ -0.51
VCX3B-204ENST00000453306 SMCO3A2RU48 225 aa11.86□□□□□ -0.51
VCX3B-204ENST00000453306 NDUFA4O00483 81 aa11.86□□□□□ -0.51
VCX3B-204ENST00000453306 APOHP02749 345 aaPredicted RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms