RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 CD14P08571 375 aa3.09□□□□□ -1.91
HMGB3P21-201ENST00000452483 CFC1BP0CG36 223 aa3.09□□□□□ -1.91
HMGB3P21-201ENST00000452483 BRS3P32247 399 aa3.09□□□□□ -1.91
HMGB3P21-201ENST00000452483 HIST1H4AP62805 103 aaKnown RBP3.09□□□□□ -1.91
HMGB3P21-201ENST00000452483 QRFPP83859 136 aa3.09□□□□□ -1.91
HMGB3P21-201ENST00000452483 RPL18Q07020 188 aaKnown RBP3.09□□□□□ -1.91
HMGB3P21-201ENST00000452483 Q1RN00 199 aa3.09□□□□□ -1.91
HMGB3P21-201ENST00000452483 LGALS9BQ3B8N2 356 aa3.09□□□□□ -1.91
HMGB3P21-201ENST00000452483 PABPC1L2AQ5JQF8 200 aa3.09□□□□□ -1.91
HMGB3P21-201ENST00000452483 LGALS9CQ6DKI2 356 aa3.09□□□□□ -1.91
HMGB3P21-201ENST00000452483 IZUMO2Q6UXV1 221 aa3.09□□□□□ -1.91
HMGB3P21-201ENST00000452483 SPATA12Q7Z6I5 190 aa3.09□□□□□ -1.91
HMGB3P21-201ENST00000452483 RNF182Q8N6D2 247 aa3.09□□□□□ -1.91
HMGB3P21-201ENST00000452483 WFDC11Q8NEX6 87 aa3.09□□□□□ -1.91
HMGB3P21-201ENST00000452483 LINC01006Q8NI28 216 aa3.09□□□□□ -1.91
HMGB3P21-201ENST00000452483 NAT14Q8WUY8 206 aa3.09□□□□□ -1.91
HMGB3P21-201ENST00000452483 GABARAPL1Q9H0R8 117 aa3.09□□□□□ -1.91
HMGB3P21-201ENST00000452483 RPP21Q9H633 154 aaKnown RBP3.09□□□□□ -1.91
HMGB3P21-201ENST00000452483 ZNF556Q9HAH1 456 aa3.09□□□□□ -1.91
HMGB3P21-201ENST00000452483 OSTCQ9NRP0 149 aa3.09□□□□□ -1.91
HMGB3P21-201ENST00000452483 ZNF586Q9NXT0 402 aa3.09□□□□□ -1.91
HMGB3P21-201ENST00000452483 TAS2R8Q9NYW2 309 aa3.09□□□□□ -1.91
HMGB3P21-201ENST00000452483 EPDR1Q9UM22 224 aa3.09□□□□□ -1.91
HMGB3P21-201ENST00000452483 ZNF835Q9Y2P0 537 aa3.09□□□□□ -1.91
HMGB3P21-201ENST00000452483 CARMIL3Q8ND23 1372 aa3.09□□□□□ -1.92
HMGB3P21-201ENST00000452483 FER1L6Q2WGJ9 1857 aa3.09□□□□□ -1.92
HMGB3P21-201ENST00000452483 MYOM3Q5VTT5 1437 aa3.09□□□□□ -1.92
HMGB3P21-201ENST00000452483 NCKAP5O14513 1909 aa3.09□□□□□ -1.92
HMGB3P21-201ENST00000452483 MYOM2P54296 1465 aa3.09□□□□□ -1.92
HMGB3P21-201ENST00000452483 PIKFYVEQ9Y2I7 2098 aa3.08□□□□□ -1.92
HMGB3P21-201ENST00000452483 UBR2Q8IWV8 1755 aa3.08□□□□□ -1.92
HMGB3P21-201ENST00000452483 IGKV1-9A0A0C4DH69 117 aa3.08□□□□□ -1.92
HMGB3P21-201ENST00000452483 A6NED7 52 aa3.08□□□□□ -1.92
HMGB3P21-201ENST00000452483 K7ERJ3 54 aa3.08□□□□□ -1.92
HMGB3P21-201ENST00000452483 PHOX2AO14813 284 aa3.08□□□□□ -1.92
HMGB3P21-201ENST00000452483 MPC2O95563 127 aa3.08□□□□□ -1.92
HMGB3P21-201ENST00000452483 HRASP01112 189 aa3.08□□□□□ -1.92
HMGB3P21-201ENST00000452483 HLA-DQA1P01909 254 aa3.08□□□□□ -1.92
HMGB3P21-201ENST00000452483 MT-ND6P03923 174 aa3.08□□□□□ -1.92
HMGB3P21-201ENST00000452483 OR5AC1P0C628 307 aa3.08□□□□□ -1.92
HMGB3P21-201ENST00000452483 PTHLHP12272 177 aa3.08□□□□□ -1.92
HMGB3P21-201ENST00000452483 NPPCP23582 126 aa3.08□□□□□ -1.92
HMGB3P21-201ENST00000452483 HLA-DMBP28068 263 aa3.08□□□□□ -1.92
HMGB3P21-201ENST00000452483 TSPEAR-AS2P59090 65 aa3.08□□□□□ -1.92
HMGB3P21-201ENST00000452483 GNB2P62879 340 aa3.08□□□□□ -1.92
HMGB3P21-201ENST00000452483 BTG2P78543 158 aa3.08□□□□□ -1.92
HMGB3P21-201ENST00000452483 CATR1Q13166 79 aa3.08□□□□□ -1.92
HMGB3P21-201ENST00000452483 MRPL51Q4U2R6 128 aaKnown RBP3.08□□□□□ -1.92
HMGB3P21-201ENST00000452483 PHF5AQ7RTV0 110 aaKnown RBP3.08□□□□□ -1.92
HMGB3P21-201ENST00000452483 PCP2Q8IVA1 136 aa3.08□□□□□ -1.92
HMGB3P21-201ENST00000452483 SAXO1Q8IYX7 474 aa3.08□□□□□ -1.92
HMGB3P21-201ENST00000452483 CEND1Q8N111 149 aa3.08□□□□□ -1.92
HMGB3P21-201ENST00000452483 KCNRGQ8N5I3 272 aa3.08□□□□□ -1.92
HMGB3P21-201ENST00000452483 C5orf17Q8NAS9 161 aa3.08□□□□□ -1.92
HMGB3P21-201ENST00000452483 OR5D16Q8NGK9 328 aa3.08□□□□□ -1.92
HMGB3P21-201ENST00000452483 RHOXF1Q8NHV9 184 aa3.08□□□□□ -1.92
HMGB3P21-201ENST00000452483 C1orf147Q96MC9 270 aaPredicted RBP3.08□□□□□ -1.92
HMGB3P21-201ENST00000452483 PRELID3AQ96N28 172 aa3.08□□□□□ -1.92
HMGB3P21-201ENST00000452483 ZNF714Q96N38 554 aa3.08□□□□□ -1.92
HMGB3P21-201ENST00000452483 OPRPNQ99935 248 aaPredicted RBP3.08□□□□□ -1.92
HMGB3P21-201ENST00000452483 SNRNP25Q9BV90 132 aaKnown RBP3.08□□□□□ -1.92
HMGB3P21-201ENST00000452483 NPCDR1Q9BY65 106 aa3.08□□□□□ -1.92
HMGB3P21-201ENST00000452483 TXNL4BQ9NX01 149 aaKnown RBP3.08□□□□□ -1.92
HMGB3P21-201ENST00000452483 COMMD3Q9UBI1 195 aa3.08□□□□□ -1.92
HMGB3P21-201ENST00000452483 MPC1Q9Y5U8 109 aa3.08□□□□□ -1.92
HMGB3P21-201ENST00000452483 IER3IP1Q9Y5U9 82 aa3.08□□□□□ -1.92
HMGB3P21-201ENST00000452483 TICRRQ7Z2Z1 1910 aa3.08□□□□□ -1.92
HMGB3P21-201ENST00000452483 COL5A2P05997 1499 aaPredicted RBP3.08□□□□□ -1.92
HMGB3P21-201ENST00000452483 ZFYVE16Q7Z3T8 1539 aa3.08□□□□□ -1.92
HMGB3P21-201ENST00000452483 GPATCH8Q9UKJ3 1502 aaKnown RBP3.08□□□□□ -1.92
HMGB3P21-201ENST00000452483 NUP210LQ5VU65 1888 aa3.07□□□□□ -1.92
HMGB3P21-201ENST00000452483 TRGV10A0A0A0MS01 117 aa3.07□□□□□ -1.92
HMGB3P21-201ENST00000452483 ZFP92A6NM28 416 aa3.07□□□□□ -1.92
HMGB3P21-201ENST00000452483 M0R129 80 aa3.07□□□□□ -1.92
HMGB3P21-201ENST00000452483 NDUFB2O95178 105 aa3.07□□□□□ -1.92
HMGB3P21-201ENST00000452483 SLC25A5P05141 298 aaKnown RBP3.07□□□□□ -1.92
HMGB3P21-201ENST00000452483 P0C879 139 aa3.07□□□□□ -1.92
HMGB3P21-201ENST00000452483 TLX1NBP0CAT3 122 aa3.07□□□□□ -1.92
HMGB3P21-201ENST00000452483 PYYP10082 97 aa3.07□□□□□ -1.92
HMGB3P21-201ENST00000452483 HLA-DRB4P13762 266 aa3.07□□□□□ -1.92
HMGB3P21-201ENST00000452483 TMEM258P61165 79 aa3.07□□□□□ -1.92
HMGB3P21-201ENST00000452483 AKR1C1Q04828 323 aa3.07□□□□□ -1.92
HMGB3P21-201ENST00000452483 EIF5AL1Q6IS14 154 aaKnown RBP3.07□□□□□ -1.92
HMGB3P21-201ENST00000452483 HIST3H2BBQ8N257 126 aa3.07□□□□□ -1.92
HMGB3P21-201ENST00000452483 BPIFB6Q8NFQ5 453 aa3.07□□□□□ -1.92
HMGB3P21-201ENST00000452483 OR10P1Q8NGE3 313 aa3.07□□□□□ -1.92
HMGB3P21-201ENST00000452483 RBPMSQ93062 196 aaKnown RBP3.07□□□□□ -1.92
HMGB3P21-201ENST00000452483 HIST1H2BLQ99880 126 aa3.07□□□□□ -1.92
HMGB3P21-201ENST00000452483 SDF2L1Q9HCN8 221 aa3.07□□□□□ -1.92
HMGB3P21-201ENST00000452483 XAGE1AQ9HD64 81 aa3.07□□□□□ -1.92
HMGB3P21-201ENST00000452483 FAM60AQ9NP50 221 aa3.07□□□□□ -1.92
HMGB3P21-201ENST00000452483 HLA-DRB4X5D2U9 266 aa3.07□□□□□ -1.92
HMGB3P21-201ENST00000452483 KDM6AO15550 1401 aaPredicted RBP3.07□□□□□ -1.92
HMGB3P21-201ENST00000452483 ZNFX1Q9P2E3 1918 aaKnown RBP3.07□□□□□ -1.92
HMGB3P21-201ENST00000452483 OTOFQ9HC10 1997 aa3.07□□□□□ -1.92
HMGB3P21-201ENST00000452483 FANCMQ8IYD8 2048 aa3.07□□□□□ -1.92
HMGB3P21-201ENST00000452483 SCN2AQ99250 2005 aa3.07□□□□□ -1.92
HMGB3P21-201ENST00000452483 IGHV1-3A0A0C4DH29 117 aa3.06□□□□□ -1.92
HMGB3P21-201ENST00000452483 UQCRQO14949 82 aa3.06□□□□□ -1.92
HMGB3P21-201ENST00000452483 KLF7O75840 302 aaPredicted RBP3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 105.8 ms