RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 IGHV4OR15-8A0A075B7B6 117 aa8.91□□□□□ -0.98
SCN9A-204ENST00000452182 A0A087WW49 117 aa8.91□□□□□ -0.98
SCN9A-204ENST00000452182 OR2T8A6NH00 312 aa8.91□□□□□ -0.98
SCN9A-204ENST00000452182 BMPR1BO00238 502 aa8.91□□□□□ -0.98
SCN9A-204ENST00000452182 TGOLN2O43493 480 aa8.91□□□□□ -0.98
SCN9A-204ENST00000452182 GNG7O60262 68 aa8.91□□□□□ -0.98
SCN9A-204ENST00000452182 GGCTO75223 188 aaKnown RBP8.91□□□□□ -0.98
SCN9A-204ENST00000452182 SCGB2A1O75556 95 aa8.91□□□□□ -0.98
SCN9A-204ENST00000452182 CST7O76096 145 aa8.91□□□□□ -0.98
SCN9A-204ENST00000452182 RPL12P30050 165 aaKnown RBP8.91□□□□□ -0.98
SCN9A-204ENST00000452182 ARL3P36405 182 aa8.91□□□□□ -0.98
SCN9A-204ENST00000452182 RND2P52198 227 aa8.91□□□□□ -0.98
SCN9A-204ENST00000452182 ARL16Q0P5N6 197 aa8.91□□□□□ -0.98
SCN9A-204ENST00000452182 AKAP14Q86UN6 197 aa8.91□□□□□ -0.98
SCN9A-204ENST00000452182 UBAC2Q8NBM4 344 aa8.91□□□□□ -0.98
SCN9A-204ENST00000452182 NPIPB3Q92617 1050 aa8.91□□□□□ -0.98
SCN9A-204ENST00000452182 DPF1Q92782 380 aa8.91□□□□□ -0.98
SCN9A-204ENST00000452182 AQP10Q96PS8 301 aa8.91□□□□□ -0.98
SCN9A-204ENST00000452182 PPP5D1E7EU14 171 aa8.9□□□□□ -0.99
SCN9A-204ENST00000452182 NUPL2O15504 423 aaKnown RBP8.9□□□□□ -0.99
SCN9A-204ENST00000452182 ADMP35318 185 aa8.9□□□□□ -0.99
SCN9A-204ENST00000452182 NHLH2Q02577 135 aa8.9□□□□□ -0.99
SCN9A-204ENST00000452182 SLC38A11Q08AI6 406 aa8.9□□□□□ -0.99
SCN9A-204ENST00000452182 ATP6V1FQ16864 119 aa8.9□□□□□ -0.99
SCN9A-204ENST00000452182 VWC2Q2TAL6 325 aa8.9□□□□□ -0.99
SCN9A-204ENST00000452182 TMEM144Q7Z5S9 345 aa8.9□□□□□ -0.99
SCN9A-204ENST00000452182 ZNF546Q86UE3 836 aa8.9□□□□□ -0.99
SCN9A-204ENST00000452182 ACY3Q96HD9 319 aa8.9□□□□□ -0.99
SCN9A-204ENST00000452182 NPVFQ9HCQ7 196 aa8.9□□□□□ -0.99
SCN9A-204ENST00000452182 TNFSF18Q9UNG2 199 aa8.9□□□□□ -0.99
SCN9A-204ENST00000452182 IGLC1P0CG04 106 aa8.89□□□□□ -0.99
SCN9A-204ENST00000452182 HOXD3P31249 432 aaPredicted RBP8.89□□□□□ -0.99
SCN9A-204ENST00000452182 RELQ04864 619 aaPredicted RBP8.89□□□□□ -0.99
SCN9A-204ENST00000452182 GPHB5Q86YW7 130 aa8.89□□□□□ -0.99
SCN9A-204ENST00000452182 TMEM217Q8N7C4 229 aa8.89□□□□□ -0.99
SCN9A-204ENST00000452182 THAP8Q8NA92 274 aa8.89□□□□□ -0.99
SCN9A-204ENST00000452182 OR1S2Q8NGQ3 325 aa8.89□□□□□ -0.99
SCN9A-204ENST00000452182 CHRDL1Q9BU40 450 aa8.89□□□□□ -0.99
SCN9A-204ENST00000452182 HSPB11Q9Y547 144 aa8.89□□□□□ -0.99
SCN9A-204ENST00000452182 IGKV1OR2-108A0A075B7D4 117 aa8.88□□□□□ -0.99
SCN9A-204ENST00000452182 FXYD6-FXYD2A0A087WZ82 144 aa8.88□□□□□ -0.99
SCN9A-204ENST00000452182 HMSDA8MTL9 139 aa8.88□□□□□ -0.99
SCN9A-204ENST00000452182 IGKV1-17P01599 117 aa8.88□□□□□ -0.99
SCN9A-204ENST00000452182 PF4P02776 101 aa8.88□□□□□ -0.99
SCN9A-204ENST00000452182 OR10J1P30954 320 aa8.88□□□□□ -0.99
SCN9A-204ENST00000452182 NUP62P37198 522 aaPredicted RBP8.88□□□□□ -0.99
SCN9A-204ENST00000452182 YPEL3P61236 119 aaPredicted RBP8.88□□□□□ -0.99
SCN9A-204ENST00000452182 KLF5Q13887 457 aaPredicted RBP8.88□□□□□ -0.99
SCN9A-204ENST00000452182 RPEL1Q2QD12 228 aa8.88□□□□□ -0.99
SCN9A-204ENST00000452182 LILRB2Q8N423 598 aa8.88□□□□□ -0.99
SCN9A-204ENST00000452182 INO80EQ8NBZ0 244 aaPredicted RBP8.88□□□□□ -0.99
SCN9A-204ENST00000452182 OR5C1Q8NGR4 320 aa8.88□□□□□ -0.99
SCN9A-204ENST00000452182 DUX3Q96PT4 197 aa8.88□□□□□ -0.99
SCN9A-204ENST00000452182 UQCC1Q9NVA1 299 aa8.88□□□□□ -0.99
SCN9A-204ENST00000452182 IGKV1D-37A0A075B6S9 117 aa8.87□□□□□ -0.99
SCN9A-204ENST00000452182 RNF222A6NCQ9 220 aa8.87□□□□□ -0.99
SCN9A-204ENST00000452182 SMLR1H3BR10 107 aa8.87□□□□□ -0.99
SCN9A-204ENST00000452182 OR2C1O95371 312 aa8.87□□□□□ -0.99
SCN9A-204ENST00000452182 TSPAN15O95858 294 aa8.87□□□□□ -0.99
SCN9A-204ENST00000452182 AKR1C1Q04828 323 aa8.87□□□□□ -0.99
SCN9A-204ENST00000452182 TREML4Q6UXN2 200 aa8.87□□□□□ -0.99
SCN9A-204ENST00000452182 C1QL4Q86Z23 238 aa8.87□□□□□ -0.99
SCN9A-204ENST00000452182 LINC00482Q8N8I6 264 aa8.87□□□□□ -0.99
SCN9A-204ENST00000452182 TRGV9Q99603 122 aa8.87□□□□□ -0.99
SCN9A-204ENST00000452182 TMEM147Q9BVK8 224 aa8.87□□□□□ -0.99
SCN9A-204ENST00000452182 LSM4Q9Y4Z0 139 aaKnown RBP8.87□□□□□ -0.99
SCN9A-204ENST00000452182 TRRAPQ9Y4A5 3859 aa8.87□□□□□ -0.99
SCN9A-204ENST00000452182 ZFP92A6NM28 416 aa8.87□□□□□ -0.99
SCN9A-204ENST00000452182 LGALS9O00182 355 aa8.87□□□□□ -0.99
SCN9A-204ENST00000452182 NDUFA4O00483 81 aa8.87□□□□□ -0.99
SCN9A-204ENST00000452182 DFFBO76075 338 aa8.87□□□□□ -0.99
SCN9A-204ENST00000452182 C1QBP02746 253 aa8.87□□□□□ -0.99
SCN9A-204ENST00000452182 FABP1P07148 127 aa8.87□□□□□ -0.99
SCN9A-204ENST00000452182 SLURP1P55000 103 aa8.87□□□□□ -0.99
SCN9A-204ENST00000452182 FAM106AQ4KMX7 169 aa8.87□□□□□ -0.99
SCN9A-204ENST00000452182 TEPPQ6URK8 271 aa8.87□□□□□ -0.99
SCN9A-204ENST00000452182 ZNF600Q6ZNG1 722 aa8.87□□□□□ -0.99
SCN9A-204ENST00000452182 REC114Q7Z4M0 266 aa8.87□□□□□ -0.99
SCN9A-204ENST00000452182 WFDC9Q8NEX5 89 aa8.87□□□□□ -0.99
SCN9A-204ENST00000452182 OR11H4Q8NGC9 324 aa8.87□□□□□ -0.99
SCN9A-204ENST00000452182 ZNF414Q96IQ9 312 aa8.87□□□□□ -0.99
SCN9A-204ENST00000452182 NEURL2Q9BR09 285 aa8.87□□□□□ -0.99
SCN9A-204ENST00000452182 ZC4H2Q9NQZ6 224 aa8.87□□□□□ -0.99
SCN9A-204ENST00000452182 WDR83OSQ9Y284 106 aa8.87□□□□□ -0.99
SCN9A-204ENST00000452182 VWFP04275 2813 aa8.86□□□□□ -0.99
SCN9A-204ENST00000452182 SMCO3A2RU48 225 aa8.86□□□□□ -0.99
SCN9A-204ENST00000452182 ARPC5O15511 151 aa8.86□□□□□ -0.99
SCN9A-204ENST00000452182 MPDU1O75352 247 aa8.86□□□□□ -0.99
SCN9A-204ENST00000452182 ZNF345Q14585 488 aa8.86□□□□□ -0.99
SCN9A-204ENST00000452182 TIGITQ495A1 244 aa8.86□□□□□ -0.99
SCN9A-204ENST00000452182 DLX4Q92988 240 aaPredicted RBP8.86□□□□□ -0.99
SCN9A-204ENST00000452182 ATP5SQ99766 215 aa8.86□□□□□ -0.99
SCN9A-204ENST00000452182 A8MWP6 167 aa8.85□□□□□ -0.99
SCN9A-204ENST00000452182 TOMM40O96008 361 aa8.85□□□□□ -0.99
SCN9A-204ENST00000452182 CFDP00746 253 aaPredicted RBP8.85□□□□□ -0.99
SCN9A-204ENST00000452182 ELLP55199 621 aaPredicted RBP8.85□□□□□ -0.99
SCN9A-204ENST00000452182 OR2F1Q13607 317 aa8.85□□□□□ -0.99
SCN9A-204ENST00000452182 CLINT1Q14677 625 aa8.85□□□□□ -0.99
SCN9A-204ENST00000452182 PRR31Q5SQ13 230 aa8.85□□□□□ -0.99
SCN9A-204ENST00000452182 Q8WTZ3 238 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms