RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 EFNB3Q15768 340 aa1.83□□□□□ -2.12
USP53-202ENST00000450251 VWC2Q2TAL6 325 aa1.83□□□□□ -2.12
USP53-202ENST00000450251 FAM27BQ5VT28 67 aa1.83□□□□□ -2.12
USP53-202ENST00000450251 PCSK4Q6UW60 755 aa1.83□□□□□ -2.12
USP53-202ENST00000450251 FAM90A1Q86YD7 464 aa1.83□□□□□ -2.12
USP53-202ENST00000450251 TEX45Q8NA69 505 aa1.83□□□□□ -2.12
USP53-202ENST00000450251 FLYWCH2Q96CP2 140 aaKnown RBP1.83□□□□□ -2.12
USP53-202ENST00000450251 VSIG2Q96IQ7 327 aa1.83□□□□□ -2.12
USP53-202ENST00000450251 SMIM14Q96QK8 99 aa1.83□□□□□ -2.12
USP53-202ENST00000450251 ASCL2Q99929 193 aa1.83□□□□□ -2.12
USP53-202ENST00000450251 FOXQ1Q9C009 403 aa1.83□□□□□ -2.12
USP53-202ENST00000450251 FZR1Q9UM11 496 aa1.83□□□□□ -2.12
USP53-202ENST00000450251 EPG5Q9HCE0 2579 aa1.83□□□□□ -2.12
USP53-202ENST00000450251 COL4A6Q14031 1691 aa1.83□□□□□ -2.12
USP53-202ENST00000450251 MYLKQ15746 1914 aa1.83□□□□□ -2.12
USP53-202ENST00000450251 WDR81Q562E7 1941 aa1.83□□□□□ -2.12
USP53-202ENST00000450251 SPTA1P02549 2419 aa1.83□□□□□ -2.12
USP53-202ENST00000450251 FRMPD3Q5JV73 1810 aa1.83□□□□□ -2.12
USP53-202ENST00000450251 RNF223E7ERA6 249 aa1.83□□□□□ -2.12
USP53-202ENST00000450251 NPFFO15130 113 aa1.83□□□□□ -2.12
USP53-202ENST00000450251 NDUFC1O43677 76 aa1.83□□□□□ -2.12
USP53-202ENST00000450251 LYZL6O75951 148 aa1.83□□□□□ -2.12
USP53-202ENST00000450251 NCR2O95944 276 aa1.83□□□□□ -2.12
USP53-202ENST00000450251 IGHV4-39P01824 125 aa1.83□□□□□ -2.12
USP53-202ENST00000450251 CTSBP07858 339 aa1.83□□□□□ -2.12
USP53-202ENST00000450251 IL9P15248 144 aa1.83□□□□□ -2.12
USP53-202ENST00000450251 GLRXP35754 106 aa1.83□□□□□ -2.12
USP53-202ENST00000450251 IGLV3-21P80748 117 aaPredicted RBP1.83□□□□□ -2.12
USP53-202ENST00000450251 C2orf83Q53S99 150 aa1.83□□□□□ -2.12
USP53-202ENST00000450251 Q6ZVH6 145 aa1.83□□□□□ -2.12
USP53-202ENST00000450251 HAPLN4Q86UW8 402 aa1.83□□□□□ -2.12
USP53-202ENST00000450251 TMEM75Q8N9X5 138 aa1.83□□□□□ -2.12
USP53-202ENST00000450251 NRTNQ99748 197 aa1.83□□□□□ -2.12
USP53-202ENST00000450251 C1QTNF5Q9BXJ0 243 aa1.83□□□□□ -2.12
USP53-202ENST00000450251 IDI2-AS1Q9NZ38 188 aa1.83□□□□□ -2.12
USP53-202ENST00000450251 TCF19Q9Y242 345 aa1.83□□□□□ -2.12
USP53-202ENST00000450251 CSDC2Q9Y534 153 aaKnown RBP1.83□□□□□ -2.12
USP53-202ENST00000450251 SLC25A15Q9Y619 301 aa1.83□□□□□ -2.12
USP53-202ENST00000450251 WNT6Q9Y6F9 365 aa1.83□□□□□ -2.12
USP53-202ENST00000450251 A0A1W2PP55 124 aa1.83□□□□□ -2.12
USP53-202ENST00000450251 C21orf140B9A014 251 aa1.83□□□□□ -2.12
USP53-202ENST00000450251 ZIC3O60481 467 aa1.83□□□□□ -2.12
USP53-202ENST00000450251 RBP4P02753 201 aa1.83□□□□□ -2.12
USP53-202ENST00000450251 CD55P08174 381 aa1.83□□□□□ -2.12
USP53-202ENST00000450251 CYBAP13498 195 aa1.83□□□□□ -2.12
USP53-202ENST00000450251 FOXA3P55318 350 aaPredicted RBP1.83□□□□□ -2.12
USP53-202ENST00000450251 FAM78AQ5JUQ0 283 aa1.83□□□□□ -2.12
USP53-202ENST00000450251 LCN12Q6JVE5 192 aa1.83□□□□□ -2.12
USP53-202ENST00000450251 LINC00479Q96M42 142 aa1.83□□□□□ -2.12
USP53-202ENST00000450251 PRORYQ9H606 182 aa1.83□□□□□ -2.12
USP53-202ENST00000450251 RNF181Q9P0P0 153 aa1.83□□□□□ -2.12
USP53-202ENST00000450251 PRO1854Q9UHT4 67 aa1.83□□□□□ -2.12
USP53-202ENST00000450251 FOXA2Q9Y261 457 aaPredicted RBP1.83□□□□□ -2.12
USP53-202ENST00000450251 ANKRD12Q6UB98 2062 aa1.83□□□□□ -2.12
USP53-202ENST00000450251 IGKV1D-42A0A075B6H8 117 aa1.83□□□□□ -2.12
USP53-202ENST00000450251 PRSS29PA6NIE9 313 aa1.83□□□□□ -2.12
USP53-202ENST00000450251 METTL12A8MUP2 240 aa1.83□□□□□ -2.12
USP53-202ENST00000450251 H7C2G1 150 aa1.83□□□□□ -2.12
USP53-202ENST00000450251 CEACAM4O75871 244 aa1.83□□□□□ -2.12
USP53-202ENST00000450251 CDAP32320 146 aa1.83□□□□□ -2.12
USP53-202ENST00000450251 RPS28P62857 69 aaKnown RBP1.83□□□□□ -2.12
USP53-202ENST00000450251 C1orf195Q5TG92 126 aa1.83□□□□□ -2.12
USP53-202ENST00000450251 PEAR1Q5VY43 1037 aaPredicted RBP1.83□□□□□ -2.12
USP53-202ENST00000450251 LINC00643Q86TS7 51 aa1.83□□□□□ -2.12
USP53-202ENST00000450251 RPP25LQ8N5L8 163 aaKnown RBP1.83□□□□□ -2.12
USP53-202ENST00000450251 Q8N8P6 123 aa1.83□□□□□ -2.12
USP53-202ENST00000450251 IGFBPL1Q8WX77 278 aa1.83□□□□□ -2.12
USP53-202ENST00000450251 TM4SF19Q96DZ7 209 aa1.83□□□□□ -2.12
USP53-202ENST00000450251 EMC6Q9BV81 110 aa1.83□□□□□ -2.12
USP53-202ENST00000450251 MLST8Q9BVC4 326 aa1.83□□□□□ -2.12
USP53-202ENST00000450251 VSIRQ9H7M9 311 aa1.83□□□□□ -2.12
USP53-202ENST00000450251 CHCHD2Q9Y6H1 151 aaPredicted RBP1.83□□□□□ -2.12
USP53-202ENST00000450251 CHD5Q8TDI0 1954 aa1.83□□□□□ -2.12
USP53-202ENST00000450251 TRAV24A0A0B4J272 114 aa1.83□□□□□ -2.12
USP53-202ENST00000450251 FAM240AA0A1B0GVK7 77 aa1.83□□□□□ -2.12
USP53-202ENST00000450251 C15orf61A6NNL5 157 aa1.83□□□□□ -2.12
USP53-202ENST00000450251 PRSS46E5RG02 174 aa1.83□□□□□ -2.12
USP53-202ENST00000450251 F5H768 121 aa1.83□□□□□ -2.12
USP53-202ENST00000450251 DUSP14O95147 198 aaKnown RBP1.83□□□□□ -2.12
USP53-202ENST00000450251 NDUFA3O95167 84 aa1.83□□□□□ -2.12
USP53-202ENST00000450251 LORP23490 312 aaPredicted RBP1.83□□□□□ -2.12
USP53-202ENST00000450251 PVRIGQ6DKI7 326 aa1.83□□□□□ -2.12
USP53-202ENST00000450251 UFSP1Q6NVU6 142 aa1.83□□□□□ -2.12
USP53-202ENST00000450251 FAM159AQ6UWV7 190 aa1.83□□□□□ -2.12
USP53-202ENST00000450251 FAM214BQ7L5A3 538 aa1.83□□□□□ -2.12
USP53-202ENST00000450251 GTSCR1Q86UQ5 136 aa1.83□□□□□ -2.12
USP53-202ENST00000450251 SLC50A1Q9BRV3 221 aa1.83□□□□□ -2.12
USP53-202ENST00000450251 LHFPL6Q9Y693 200 aa1.83□□□□□ -2.12
USP53-202ENST00000450251 TRPM7Q96QT4 1865 aa1.83□□□□□ -2.12
USP53-202ENST00000450251 KIF26AQ9ULI4 1882 aaPredicted RBP1.83□□□□□ -2.12
USP53-202ENST00000450251 FAM208BQ5VWN6 2430 aa1.83□□□□□ -2.12
USP53-202ENST00000450251 A0A0A6YYD4 124 aa1.82□□□□□ -2.12
USP53-202ENST00000450251 TRAV12-1A0A0B4J245 112 aa1.82□□□□□ -2.12
USP53-202ENST00000450251 TCRBV4S1A1TA0A5B7 111 aa1.82□□□□□ -2.12
USP53-202ENST00000450251 E9PLD3 99 aa1.82□□□□□ -2.12
USP53-202ENST00000450251 RHODO00212 210 aa1.82□□□□□ -2.12
USP53-202ENST00000450251 MGPP08493 103 aa1.82□□□□□ -2.12
USP53-202ENST00000450251 PYYP10082 97 aa1.82□□□□□ -2.12
USP53-202ENST00000450251 MAGEA5P43359 124 aa1.82□□□□□ -2.12
USP53-202ENST00000450251 LOXL3P58215 753 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms