RNA–Protein interactions for RNA: ENST00000450198.6

SMARCA2-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCA2, Length 5,602 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-214ENST00000450198 COL18A1P39060 1754 aa11.96□□□□□ -0.5
SMARCA2-214ENST00000450198 MBD3L4A6NDZ8 208 aaPredicted RBP11.96□□□□□ -0.5
SMARCA2-214ENST00000450198 MBD3L3A6NE82 208 aaPredicted RBP11.96□□□□□ -0.5
SMARCA2-214ENST00000450198 MBD3L5A6NJ08 208 aaPredicted RBP11.96□□□□□ -0.5
SMARCA2-214ENST00000450198 FCN3O75636 299 aa11.96□□□□□ -0.5
SMARCA2-214ENST00000450198 MBD3L2Q8NHZ7 208 aaPredicted RBP11.96□□□□□ -0.5
SMARCA2-214ENST00000450198 SEC16AO15027 2179 aa11.95□□□□□ -0.5
SMARCA2-214ENST00000450198 SYNJ2BPP57105 145 aa11.95□□□□□ -0.5
SMARCA2-214ENST00000450198 GFI1BQ5VTD9 330 aa11.95□□□□□ -0.5
SMARCA2-214ENST00000450198 SCN1AP35498 2009 aa11.95□□□□□ -0.5
SMARCA2-214ENST00000450198 FXYD7P58549 80 aa11.95□□□□□ -0.5
SMARCA2-214ENST00000450198 TMEM200BQ69YZ2 307 aa11.95□□□□□ -0.5
SMARCA2-214ENST00000450198 IGLV3-32A0A0A0MS00 114 aa11.95□□□□□ -0.5
SMARCA2-214ENST00000450198 IGHV3-73A0A0B4J1V6 119 aa11.95□□□□□ -0.5
SMARCA2-214ENST00000450198 RGPD3A6NKT7 1758 aaPredicted RBP11.95□□□□□ -0.5
SMARCA2-214ENST00000450198 VWCEQ96DN2 955 aa11.95□□□□□ -0.5
SMARCA2-214ENST00000450198 EPDR1Q9UM22 224 aa11.95□□□□□ -0.5
SMARCA2-214ENST00000450198 A0A0U1RRA0 63 aa11.95□□□□□ -0.5
SMARCA2-214ENST00000450198 LINC01590Q5TEZ4 76 aa11.95□□□□□ -0.5
SMARCA2-214ENST00000450198 RHPN1-AS1Q9BWJ2 59 aa11.95□□□□□ -0.5
SMARCA2-214ENST00000450198 TRAV2A0A0B4J234 112 aa11.94□□□□□ -0.5
SMARCA2-214ENST00000450198 C1orf159Q96HA4 380 aa11.94□□□□□ -0.5
SMARCA2-214ENST00000450198 CACNA1BQ00975 2339 aa11.94□□□□□ -0.5
SMARCA2-214ENST00000450198 PLXNB2O15031 1838 aa11.94□□□□□ -0.5
SMARCA2-214ENST00000450198 ZNF362Q5T0B9 420 aaPredicted RBP11.94□□□□□ -0.5
SMARCA2-214ENST00000450198 ZNF497Q6ZNH5 498 aa11.94□□□□□ -0.5
SMARCA2-214ENST00000450198 CHTOPQ9Y3Y2 248 aaKnown RBP11.94□□□□□ -0.5
SMARCA2-214ENST00000450198 TRBV6-7A0A0A0MS04 114 aa11.94□□□□□ -0.5
SMARCA2-214ENST00000450198 TFF3Q07654 80 aa11.94□□□□□ -0.5
SMARCA2-214ENST00000450198 IZUMO1RA6ND01 250 aa11.94□□□□□ -0.5
SMARCA2-214ENST00000450198 SRRM5B3KS81 715 aa11.94□□□□□ -0.5
SMARCA2-214ENST00000450198 GATA2P23769 480 aaPredicted RBP11.94□□□□□ -0.5
SMARCA2-214ENST00000450198 DEFB131AP59861 70 aa11.94□□□□□ -0.5
SMARCA2-214ENST00000450198 OVOL2Q9BRP0 275 aa11.94□□□□□ -0.5
SMARCA2-214ENST00000450198 TNS1Q9HBL0 1735 aaKnown RBP11.94□□□□□ -0.5
SMARCA2-214ENST00000450198 TRAV9-1A0A075B6T8 112 aa11.93□□□□□ -0.5
SMARCA2-214ENST00000450198 CLPSP04118 112 aa11.93□□□□□ -0.5
SMARCA2-214ENST00000450198 CCL1P22362 96 aa11.93□□□□□ -0.5
SMARCA2-214ENST00000450198 SAA4P35542 130 aa11.93□□□□□ -0.5
SMARCA2-214ENST00000450198 GTF3AQ92664 365 aaKnown RBP11.93□□□□□ -0.5
SMARCA2-214ENST00000450198 NABP1Q96AH0 204 aa11.93□□□□□ -0.5
SMARCA2-214ENST00000450198 TRIP12Q14669 1992 aaPredicted RBP11.93□□□□□ -0.5
SMARCA2-214ENST00000450198 TEX48A0A1B0GUV7 120 aa11.93□□□□□ -0.5
SMARCA2-214ENST00000450198 A0A1B0GUS0 222 aa11.93□□□□□ -0.5
SMARCA2-214ENST00000450198 ATXN8Q156A1 80 aa11.93□□□□□ -0.5
SMARCA2-214ENST00000450198 C9orf62Q8N4C0 152 aa11.93□□□□□ -0.5
SMARCA2-214ENST00000450198 SPOCK3Q9BQ16 436 aa11.93□□□□□ -0.5
SMARCA2-214ENST00000450198 NPDC1Q9NQX5 325 aaPredicted RBP11.93□□□□□ -0.5
SMARCA2-214ENST00000450198 KLF12Q9Y4X4 402 aa11.93□□□□□ -0.5
SMARCA2-214ENST00000450198 VWC2LB2RUY7 222 aa11.93□□□□□ -0.5
SMARCA2-214ENST00000450198 DANCRP0C864 163 aa11.93□□□□□ -0.5
SMARCA2-214ENST00000450198 ZNF138P52744 262 aa11.93□□□□□ -0.5
SMARCA2-214ENST00000450198 PLEKHB2Q96CS7 222 aa11.93□□□□□ -0.5
SMARCA2-214ENST00000450198 DOPEY2Q9Y3R5 2298 aa11.93□□□□□ -0.5
SMARCA2-214ENST00000450198 M0R2P5 195 aa11.92□□□□□ -0.5
SMARCA2-214ENST00000450198 PLAC1Q9HBJ0 212 aa11.92□□□□□ -0.5
SMARCA2-214ENST00000450198 A0A1B0GWB2 263 aa11.92□□□□□ -0.5
SMARCA2-214ENST00000450198 A0A1B0GWJ7 208 aa11.92□□□□□ -0.5
SMARCA2-214ENST00000450198 PINLYPA6NC86 204 aa11.92□□□□□ -0.5
SMARCA2-214ENST00000450198 MLNRO43193 412 aa11.92□□□□□ -0.5
SMARCA2-214ENST00000450198 TMEM238C9JI98 176 aa11.92□□□□□ -0.5
SMARCA2-214ENST00000450198 DPM2O94777 84 aa11.92□□□□□ -0.5
SMARCA2-214ENST00000450198 CA1P00915 261 aaPredicted RBP11.92□□□□□ -0.5
SMARCA2-214ENST00000450198 RCC1LQ96I51 464 aaKnown RBP11.92□□□□□ -0.5
SMARCA2-214ENST00000450198 WISP1O95388 367 aa11.91□□□□□ -0.5
SMARCA2-214ENST00000450198 PRTN3P24158 256 aa11.91□□□□□ -0.5
SMARCA2-214ENST00000450198 FOXL1Q12952 345 aa11.91□□□□□ -0.5
SMARCA2-214ENST00000450198 REG4Q9BYZ8 158 aa11.91□□□□□ -0.5
SMARCA2-214ENST00000450198 DKK4Q9UBT3 224 aa11.91□□□□□ -0.5
SMARCA2-214ENST00000450198 IGHV1-69DA0A0B4J2H0 117 aa11.91□□□□□ -0.5
SMARCA2-214ENST00000450198 IGHV1-69P01742 117 aa11.91□□□□□ -0.5
SMARCA2-214ENST00000450198 IGHV4-39P01824 125 aa11.91□□□□□ -0.5
SMARCA2-214ENST00000450198 UBE2E1P51965 193 aa11.91□□□□□ -0.5
SMARCA2-214ENST00000450198 MAPK1IP1LQ8NDC0 245 aa11.91□□□□□ -0.5
SMARCA2-214ENST00000450198 ZNF837Q96EG3 531 aaPredicted RBP11.91□□□□□ -0.5
SMARCA2-214ENST00000450198 COQ2Q96H96 371 aa11.91□□□□□ -0.5
SMARCA2-214ENST00000450198 SCO2A0A1W2PP80 73 aa11.91□□□□□ -0.5
SMARCA2-214ENST00000450198 RHODO00212 210 aa11.91□□□□□ -0.5
SMARCA2-214ENST00000450198 PLA2G10O15496 165 aa11.91□□□□□ -0.5
SMARCA2-214ENST00000450198 VWC2Q2TAL6 325 aa11.91□□□□□ -0.5
SMARCA2-214ENST00000450198 RFNGQ9Y644 331 aa11.91□□□□□ -0.5
SMARCA2-214ENST00000450198 BUB1B-PAK6H3BSN5 160 aa11.91□□□□□ -0.5
SMARCA2-214ENST00000450198 EVI2AP22794 236 aa11.91□□□□□ -0.5
SMARCA2-214ENST00000450198 PPIFP30405 207 aaKnown RBP11.91□□□□□ -0.5
SMARCA2-214ENST00000450198 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.91□□□□□ -0.5
SMARCA2-214ENST00000450198 HIGD1CA8MV81 97 aa11.9□□□□□ -0.5
SMARCA2-214ENST00000450198 VCYO14598 125 aa11.9□□□□□ -0.5
SMARCA2-214ENST00000450198 SLAQ13239 276 aa11.9□□□□□ -0.5
SMARCA2-214ENST00000450198 LINC01559Q495D7 138 aa11.9□□□□□ -0.5
SMARCA2-214ENST00000450198 IL17DQ8TAD2 202 aa11.9□□□□□ -0.5
SMARCA2-214ENST00000450198 DNAJC30Q96LL9 226 aa11.9□□□□□ -0.5
SMARCA2-214ENST00000450198 ARID1AO14497 2285 aa11.9□□□□□ -0.5
SMARCA2-214ENST00000450198 A0A1W2PRE2 83 aa11.9□□□□□ -0.5
SMARCA2-214ENST00000450198 DPRXA6NFQ7 191 aa11.9□□□□□ -0.5
SMARCA2-214ENST00000450198 SNRNP200O75643 2136 aaKnown RBP11.9□□□□□ -0.5
SMARCA2-214ENST00000450198 LGALS1P09382 135 aaKnown RBP11.9□□□□□ -0.5
SMARCA2-214ENST00000450198 CBLN1P23435 193 aa11.9□□□□□ -0.5
SMARCA2-214ENST00000450198 RPL15P61313 204 aaKnown RBP11.9□□□□□ -0.5
SMARCA2-214ENST00000450198 TMEM256Q8N2U0 113 aa11.9□□□□□ -0.5
SMARCA2-214ENST00000450198 CCDC88CQ9P219 2028 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms