RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 PIGCQ92535 297 aa2.91□□□□□ -1.94
HMGB3P8-201ENST00000449709 ARPC1AQ92747 370 aa2.91□□□□□ -1.94
HMGB3P8-201ENST00000449709 KLK6Q92876 244 aa2.91□□□□□ -1.94
HMGB3P8-201ENST00000449709 FLYWCH2Q96CP2 140 aaKnown RBP2.91□□□□□ -1.94
HMGB3P8-201ENST00000449709 RAB40CQ96S21 281 aa2.91□□□□□ -1.94
HMGB3P8-201ENST00000449709 KXD1Q9BQD3 176 aa2.91□□□□□ -1.94
HMGB3P8-201ENST00000449709 TMEM204Q9BSN7 226 aa2.91□□□□□ -1.94
HMGB3P8-201ENST00000449709 SPRY4Q9C004 299 aa2.91□□□□□ -1.94
HMGB3P8-201ENST00000449709 FAM234AQ9H0X4 552 aa2.91□□□□□ -1.94
HMGB3P8-201ENST00000449709 GLIPR2Q9H4G4 154 aa2.91□□□□□ -1.94
HMGB3P8-201ENST00000449709 SLC39A9Q9NUM3 307 aa2.91□□□□□ -1.94
HMGB3P8-201ENST00000449709 HRASLS2Q9NWW9 162 aa2.91□□□□□ -1.94
HMGB3P8-201ENST00000449709 TAS2R4Q9NYW5 299 aa2.91□□□□□ -1.94
HMGB3P8-201ENST00000449709 MSRB1Q9NZV6 116 aa2.91□□□□□ -1.94
HMGB3P8-201ENST00000449709 GAGE2DQ9UEU5 116 aa2.91□□□□□ -1.94
HMGB3P8-201ENST00000449709 PROCRQ9UNN8 238 aa2.91□□□□□ -1.94
HMGB3P8-201ENST00000449709 HIGD1AQ9Y241 93 aa2.91□□□□□ -1.94
HMGB3P8-201ENST00000449709 PIGLQ9Y2B2 252 aa2.91□□□□□ -1.94
HMGB3P8-201ENST00000449709 MPC1Q9Y5U8 109 aa2.91□□□□□ -1.94
HMGB3P8-201ENST00000449709 SOX21Q9Y651 276 aaPredicted RBP2.91□□□□□ -1.94
HMGB3P8-201ENST00000449709 R4GN57 208 aa2.91□□□□□ -1.94
HMGB3P8-201ENST00000449709 COL4A6Q14031 1691 aa2.91□□□□□ -1.94
HMGB3P8-201ENST00000449709 GTF3C1Q12789 2109 aa2.9□□□□□ -1.94
HMGB3P8-201ENST00000449709 RAI1Q7Z5J4 1906 aaPredicted RBP2.9□□□□□ -1.95
HMGB3P8-201ENST00000449709 TRAV27A0A087WT01 109 aa2.9□□□□□ -1.95
HMGB3P8-201ENST00000449709 PIGBOS1A0A0B4J2F0 54 aa2.9□□□□□ -1.95
HMGB3P8-201ENST00000449709 IGHV1-24A0A0C4DH33 117 aa2.9□□□□□ -1.95
HMGB3P8-201ENST00000449709 A0A1B0GTH9 108 aa2.9□□□□□ -1.95
HMGB3P8-201ENST00000449709 A0A1B0GXF2 115 aa2.9□□□□□ -1.95
HMGB3P8-201ENST00000449709 LINC01548A6NM66 108 aa2.9□□□□□ -1.95
HMGB3P8-201ENST00000449709 IGLL5B9A064 214 aa2.9□□□□□ -1.95
HMGB3P8-201ENST00000449709 K7EN84 100 aa2.9□□□□□ -1.95
HMGB3P8-201ENST00000449709 PLPP1O14494 284 aa2.9□□□□□ -1.95
HMGB3P8-201ENST00000449709 ZIC3O60481 467 aa2.9□□□□□ -1.95
HMGB3P8-201ENST00000449709 PROP1O75360 226 aa2.9□□□□□ -1.95
HMGB3P8-201ENST00000449709 HSBP1O75506 76 aa2.9□□□□□ -1.95
HMGB3P8-201ENST00000449709 APOMO95445 188 aa2.9□□□□□ -1.95
HMGB3P8-201ENST00000449709 NAPSAO96009 420 aa2.9□□□□□ -1.95
HMGB3P8-201ENST00000449709 APOA2P02652 100 aa2.9□□□□□ -1.95
HMGB3P8-201ENST00000449709 FRMD6-AS1P0C7T7 363 aa2.9□□□□□ -1.95
HMGB3P8-201ENST00000449709 PIRTP0C851 137 aa2.9□□□□□ -1.95
HMGB3P8-201ENST00000449709 SMIM13P0DJ93 91 aa2.9□□□□□ -1.95
HMGB3P8-201ENST00000449709 LINC00694P0DN24 101 aa2.9□□□□□ -1.95
HMGB3P8-201ENST00000449709 RPS12P25398 132 aaKnown RBP2.9□□□□□ -1.95
HMGB3P8-201ENST00000449709 GLRXP35754 106 aa2.9□□□□□ -1.95
HMGB3P8-201ENST00000449709 IER3P46695 156 aa2.9□□□□□ -1.95
HMGB3P8-201ENST00000449709 DSCR4P56555 118 aaPredicted RBP2.9□□□□□ -1.95
HMGB3P8-201ENST00000449709 CLDN17P56750 224 aa2.9□□□□□ -1.95
HMGB3P8-201ENST00000449709 FKBP1AP62942 108 aaKnown RBP2.9□□□□□ -1.95
HMGB3P8-201ENST00000449709 ZNF90Q03938 601 aa2.9□□□□□ -1.95
HMGB3P8-201ENST00000449709 EBI3Q14213 229 aa2.9□□□□□ -1.95
HMGB3P8-201ENST00000449709 RPEL1Q2QD12 228 aa2.9□□□□□ -1.95
HMGB3P8-201ENST00000449709 IBA57Q5T440 356 aaKnown RBP2.9□□□□□ -1.95
HMGB3P8-201ENST00000449709 TSPO2Q5TGU0 170 aa2.9□□□□□ -1.95
HMGB3P8-201ENST00000449709 RNASEKQ6P5S7 137 aaKnown RBP2.9□□□□□ -1.95
HMGB3P8-201ENST00000449709 KCTD18Q6PI47 426 aaPredicted RBP2.9□□□□□ -1.95
HMGB3P8-201ENST00000449709 FAM159AQ6UWV7 190 aa2.9□□□□□ -1.95
HMGB3P8-201ENST00000449709 ZNF793Q6ZN11 406 aa2.9□□□□□ -1.95
HMGB3P8-201ENST00000449709 ZNF841Q6ZN19 808 aa2.9□□□□□ -1.95
HMGB3P8-201ENST00000449709 ACP7Q6ZNF0 438 aa2.9□□□□□ -1.95
HMGB3P8-201ENST00000449709 Q6ZSR3 168 aa2.9□□□□□ -1.95
HMGB3P8-201ENST00000449709 ATP5L2Q7Z4Y8 100 aa2.9□□□□□ -1.95
HMGB3P8-201ENST00000449709 TEN1Q86WV5 123 aa2.9□□□□□ -1.95
HMGB3P8-201ENST00000449709 FAM19A2Q8N3H0 131 aa2.9□□□□□ -1.95
HMGB3P8-201ENST00000449709 Q8N7P7 452 aa2.9□□□□□ -1.95
HMGB3P8-201ENST00000449709 GATD1Q8NB37 220 aa2.9□□□□□ -1.95
HMGB3P8-201ENST00000449709 OR6K6Q8NGW6 343 aa2.9□□□□□ -1.95
HMGB3P8-201ENST00000449709 OR51H1Q8NH63 302 aa2.9□□□□□ -1.95
HMGB3P8-201ENST00000449709 SCGB1C1Q8TD33 95 aa2.9□□□□□ -1.95
HMGB3P8-201ENST00000449709 UBE2E3Q969T4 207 aa2.9□□□□□ -1.95
HMGB3P8-201ENST00000449709 ST6GALNAC6Q969X2 333 aa2.9□□□□□ -1.95
HMGB3P8-201ENST00000449709 CLDN23Q96B33 292 aa2.9□□□□□ -1.95
HMGB3P8-201ENST00000449709 C8orf44Q96CB5 159 aa2.9□□□□□ -1.95
HMGB3P8-201ENST00000449709 SNRNP40Q96DI7 357 aaKnown RBP2.9□□□□□ -1.95
HMGB3P8-201ENST00000449709 LINC00479Q96M42 142 aa2.9□□□□□ -1.95
HMGB3P8-201ENST00000449709 HSD17B10Q99714 261 aaKnown RBP2.9□□□□□ -1.95
HMGB3P8-201ENST00000449709 PRADC1Q9BSG0 188 aa2.9□□□□□ -1.95
HMGB3P8-201ENST00000449709 MCRIP2Q9BUT9 160 aaKnown RBP2.9□□□□□ -1.95
HMGB3P8-201ENST00000449709 TTTY10Q9BZA0 68 aa2.9□□□□□ -1.95
HMGB3P8-201ENST00000449709 TMEM222Q9H0R3 208 aa2.9□□□□□ -1.95
HMGB3P8-201ENST00000449709 LIME1Q9H400 295 aa2.9□□□□□ -1.95
HMGB3P8-201ENST00000449709 IDI2-AS1Q9NZ38 188 aa2.9□□□□□ -1.95
HMGB3P8-201ENST00000449709 PRO0628Q9UI54 55 aa2.9□□□□□ -1.95
HMGB3P8-201ENST00000449709 LHFPL6Q9Y693 200 aa2.9□□□□□ -1.95
HMGB3P8-201ENST00000449709 EXPH5Q8NEV8 1989 aa2.89□□□□□ -1.95
HMGB3P8-201ENST00000449709 A0A0A6YYD5 115 aa2.89□□□□□ -1.95
HMGB3P8-201ENST00000449709 IZUMO1RA6ND01 250 aa2.89□□□□□ -1.95
HMGB3P8-201ENST00000449709 FAM90A10PA6NDY2 464 aa2.89□□□□□ -1.95
HMGB3P8-201ENST00000449709 C11orf94C9JXX5 98 aa2.89□□□□□ -1.95
HMGB3P8-201ENST00000449709 LY6LH3BQJ8 138 aa2.89□□□□□ -1.95
HMGB3P8-201ENST00000449709 K7EQS6 105 aa2.89□□□□□ -1.95
HMGB3P8-201ENST00000449709 TNFSF11O14788 317 aa2.89□□□□□ -1.95
HMGB3P8-201ENST00000449709 TIMM23O14925 209 aa2.89□□□□□ -1.95
HMGB3P8-201ENST00000449709 NPFFO15130 113 aa2.89□□□□□ -1.95
HMGB3P8-201ENST00000449709 ANGPTL7O43827 346 aa2.89□□□□□ -1.95
HMGB3P8-201ENST00000449709 ZG16O60844 167 aa2.89□□□□□ -1.95
HMGB3P8-201ENST00000449709 DUSP14O95147 198 aaKnown RBP2.89□□□□□ -1.95
HMGB3P8-201ENST00000449709 NDUFA7O95182 113 aa2.89□□□□□ -1.95
HMGB3P8-201ENST00000449709 C1orf105O95561 183 aa2.89□□□□□ -1.95
HMGB3P8-201ENST00000449709 EML2O95834 649 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms