RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 ASB13Q8WXK3 278 aa10.44□□□□□ -0.74
PDLIM2-213ENST00000448520 NEURL2Q9BR09 285 aa10.44□□□□□ -0.74
PDLIM2-213ENST00000448520 SPATA25Q9BR10 227 aa10.44□□□□□ -0.74
PDLIM2-213ENST00000448520 EDA2RQ9HAV5 297 aa10.44□□□□□ -0.74
PDLIM2-213ENST00000448520 LYRM2Q9NU23 88 aaPredicted RBP10.44□□□□□ -0.74
PDLIM2-213ENST00000448520 PEF1Q9UBV8 284 aaKnown RBP10.44□□□□□ -0.74
PDLIM2-213ENST00000448520 KLK9Q9UKQ9 250 aa10.44□□□□□ -0.74
PDLIM2-213ENST00000448520 PRSS46E5RG02 174 aa10.43□□□□□ -0.74
PDLIM2-213ENST00000448520 OPRK1P41145 380 aa10.43□□□□□ -0.74
PDLIM2-213ENST00000448520 P2RY1P47900 373 aa10.43□□□□□ -0.74
PDLIM2-213ENST00000448520 NHLH2Q02577 135 aa10.43□□□□□ -0.74
PDLIM2-213ENST00000448520 EXOSC2Q13868 293 aaKnown RBP10.43□□□□□ -0.74
PDLIM2-213ENST00000448520 IL34Q6ZMJ4 242 aa10.43□□□□□ -0.74
PDLIM2-213ENST00000448520 GTSCR1Q86UQ5 136 aa10.43□□□□□ -0.74
PDLIM2-213ENST00000448520 TMEM217Q8N7C4 229 aa10.43□□□□□ -0.74
PDLIM2-213ENST00000448520 NECAP1Q8NC96 275 aa10.43□□□□□ -0.74
PDLIM2-213ENST00000448520 SCARB1Q8WTV0 552 aa10.43□□□□□ -0.74
PDLIM2-213ENST00000448520 TUBA4BQ9H853 241 aa10.43□□□□□ -0.74
PDLIM2-213ENST00000448520 FAM223BA6NKX1 122 aa10.42□□□□□ -0.74
PDLIM2-213ENST00000448520 TRBV12-3P01733 135 aa10.42□□□□□ -0.74
PDLIM2-213ENST00000448520 PET100P0DJ07 73 aa10.42□□□□□ -0.74
PDLIM2-213ENST00000448520 HIST1H1BP16401 226 aaKnown RBP10.42□□□□□ -0.74
PDLIM2-213ENST00000448520 SYNJ2BPP57105 145 aa10.42□□□□□ -0.74
PDLIM2-213ENST00000448520 RAB11AP62491 216 aa10.42□□□□□ -0.74
PDLIM2-213ENST00000448520 RPP30P78346 268 aaKnown RBP10.42□□□□□ -0.74
PDLIM2-213ENST00000448520 EWSR1Q01844 656 aaKnown RBP eCLIP10.42□□□□□ -0.74
PDLIM2-213ENST00000448520 ATP5G2Q06055 141 aa10.42□□□□□ -0.74
PDLIM2-213ENST00000448520 ZFAND6Q6FIF0 208 aa10.42□□□□□ -0.74
PDLIM2-213ENST00000448520 LCN12Q6JVE5 192 aa10.42□□□□□ -0.74
PDLIM2-213ENST00000448520 SLC16A13Q7RTY0 426 aa10.42□□□□□ -0.74
PDLIM2-213ENST00000448520 FAM223AQ8IWN6 122 aa10.42□□□□□ -0.74
PDLIM2-213ENST00000448520 TCTE3Q8IZS6 198 aa10.42□□□□□ -0.74
PDLIM2-213ENST00000448520 CCDC140Q96MF4 163 aa10.42□□□□□ -0.74
PDLIM2-213ENST00000448520 ZC4H2Q9NQZ6 224 aa10.42□□□□□ -0.74
PDLIM2-213ENST00000448520 F8W735 103 aaPredicted RBP10.41□□□□□ -0.74
PDLIM2-213ENST00000448520 ARPC5O15511 151 aa10.41□□□□□ -0.74
PDLIM2-213ENST00000448520 SLC25A4P12235 298 aa10.41□□□□□ -0.74
PDLIM2-213ENST00000448520 FGL1Q08830 312 aa10.41□□□□□ -0.74
PDLIM2-213ENST00000448520 HAGHQ16775 308 aa10.41□□□□□ -0.74
PDLIM2-213ENST00000448520 RPEL1Q2QD12 228 aa10.41□□□□□ -0.74
PDLIM2-213ENST00000448520 ACOT7LQ6ZUV0 252 aa10.41□□□□□ -0.74
PDLIM2-213ENST00000448520 OR1L6Q8NGR2 347 aa10.41□□□□□ -0.74
PDLIM2-213ENST00000448520 OR2K2Q8NGT1 345 aa10.41□□□□□ -0.74
PDLIM2-213ENST00000448520 RNASEH2CQ8TDP1 164 aaKnown RBP10.41□□□□□ -0.74
PDLIM2-213ENST00000448520 SMIM3Q9BZL3 60 aa10.41□□□□□ -0.74
PDLIM2-213ENST00000448520 PEMTQ9UBM1 199 aa10.41□□□□□ -0.74
PDLIM2-213ENST00000448520 RNF222A6NCQ9 220 aa10.4□□□□□ -0.74
PDLIM2-213ENST00000448520 CORTO00230 105 aa10.4□□□□□ -0.74
PDLIM2-213ENST00000448520 CYB5BO43169 146 aa10.4□□□□□ -0.74
PDLIM2-213ENST00000448520 CSN3P07498 182 aa10.4□□□□□ -0.74
PDLIM2-213ENST00000448520 RPL12P30050 165 aaKnown RBP10.4□□□□□ -0.74
PDLIM2-213ENST00000448520 SULT1A1P50225 295 aa10.4□□□□□ -0.74
PDLIM2-213ENST00000448520 RND2P52198 227 aa10.4□□□□□ -0.74
PDLIM2-213ENST00000448520 CLEC19AQ6UXS0 136 aa10.4□□□□□ -0.74
PDLIM2-213ENST00000448520 ZNF546Q86UE3 836 aa10.4□□□□□ -0.74
PDLIM2-213ENST00000448520 NOXA1Q86UR1 476 aa10.4□□□□□ -0.74
PDLIM2-213ENST00000448520 UBAC2Q8NBM4 344 aa10.4□□□□□ -0.74
PDLIM2-213ENST00000448520 IL17DQ8TAD2 202 aa10.4□□□□□ -0.74
PDLIM2-213ENST00000448520 ZNF502Q8TBZ5 544 aa10.4□□□□□ -0.74
PDLIM2-213ENST00000448520 ACY3Q96HD9 319 aa10.4□□□□□ -0.74
PDLIM2-213ENST00000448520 C21orf62Q9NYP8 219 aa10.4□□□□□ -0.74
PDLIM2-213ENST00000448520 THYN1Q9P016 225 aa10.4□□□□□ -0.74
PDLIM2-213ENST00000448520 TNFSF18Q9UNG2 199 aa10.4□□□□□ -0.74
PDLIM2-213ENST00000448520 HSPB11Q9Y547 144 aa10.4□□□□□ -0.74
PDLIM2-213ENST00000448520 SACSQ9NZJ4 4579 aa10.4□□□□□ -0.74
PDLIM2-213ENST00000448520 LYSTQ99698 3801 aa10.39□□□□□ -0.75
PDLIM2-213ENST00000448520 PPP5D1E7EU14 171 aa10.39□□□□□ -0.75
PDLIM2-213ENST00000448520 GPR183P32249 361 aa10.39□□□□□ -0.75
PDLIM2-213ENST00000448520 AP2S1P53680 142 aaPredicted RBP10.39□□□□□ -0.75
PDLIM2-213ENST00000448520 ATP5IP56385 69 aaPredicted RBP10.39□□□□□ -0.75
PDLIM2-213ENST00000448520 SLC38A11Q08AI6 406 aa10.39□□□□□ -0.75
PDLIM2-213ENST00000448520 GAMTQ14353 236 aa10.39□□□□□ -0.75
PDLIM2-213ENST00000448520 CLINT1Q14677 625 aa10.39□□□□□ -0.75
PDLIM2-213ENST00000448520 Q56UQ5 140 aa10.39□□□□□ -0.75
PDLIM2-213ENST00000448520 FAM209BQ5JX69 171 aa10.39□□□□□ -0.75
PDLIM2-213ENST00000448520 OR10P1Q8NGE3 313 aa10.39□□□□□ -0.75
PDLIM2-213ENST00000448520 VN1R17PQ8TDU5 208 aa10.39□□□□□ -0.75
PDLIM2-213ENST00000448520 NPIPB3Q92617 1050 aa10.39□□□□□ -0.75
PDLIM2-213ENST00000448520 EEF1AKMT3Q96AZ1 226 aa10.39□□□□□ -0.75
PDLIM2-213ENST00000448520 SLC25A31Q9H0C2 315 aa10.39□□□□□ -0.75
PDLIM2-213ENST00000448520 WFDC1Q9HC57 220 aa10.39□□□□□ -0.75
PDLIM2-213ENST00000448520 SMCO3A2RU48 225 aa10.38□□□□□ -0.75
PDLIM2-213ENST00000448520 OR2T8A6NH00 312 aa10.38□□□□□ -0.75
PDLIM2-213ENST00000448520 C1QBP02746 253 aa10.38□□□□□ -0.75
PDLIM2-213ENST00000448520 CXCL2P19875 107 aa10.38□□□□□ -0.75
PDLIM2-213ENST00000448520 DLK1P80370 383 aa10.38□□□□□ -0.75
PDLIM2-213ENST00000448520 STX12Q86Y82 276 aa10.38□□□□□ -0.75
PDLIM2-213ENST00000448520 OR5C1Q8NGR4 320 aa10.38□□□□□ -0.75
PDLIM2-213ENST00000448520 CXorf58Q96LI9 332 aa10.38□□□□□ -0.75
PDLIM2-213ENST00000448520 AQP10Q96PS8 301 aa10.38□□□□□ -0.75
PDLIM2-213ENST00000448520 CSMD3Q7Z407 3707 aa10.38□□□□□ -0.75
PDLIM2-213ENST00000448520 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.37□□□□□ -0.75
PDLIM2-213ENST00000448520 IGHV3-35A0A0C4DH35 117 aa10.37□□□□□ -0.75
PDLIM2-213ENST00000448520 UBE2L5PA0A1B0GUS4 154 aa10.37□□□□□ -0.75
PDLIM2-213ENST00000448520 RPS10-NUDT3A0A1W2PQS6 291 aa10.37□□□□□ -0.75
PDLIM2-213ENST00000448520 PFDN1O60925 122 aa10.37□□□□□ -0.75
PDLIM2-213ENST00000448520 CLEC3BP05452 202 aa10.37□□□□□ -0.75
PDLIM2-213ENST00000448520 ADMP35318 185 aa10.37□□□□□ -0.75
PDLIM2-213ENST00000448520 GPX4P36969 197 aaPredicted RBP10.37□□□□□ -0.75
PDLIM2-213ENST00000448520 EIF2B2P49770 351 aaKnown RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms