RNA–Protein interactions for RNA: ENST00000448078.1

USP49-205, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 3

Gene USP49, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-205ENST00000448078 C10orf67Q8IYJ2 551 aa4.09□□□□□ -1.75
USP49-205ENST00000448078 VKORC1L1Q8N0U8 176 aa4.09□□□□□ -1.75
USP49-205ENST00000448078 LYPD1Q8N2G4 141 aa4.09□□□□□ -1.75
USP49-205ENST00000448078 MS4A15Q8N5U1 240 aa4.09□□□□□ -1.75
USP49-205ENST00000448078 OR1L8Q8NGR8 309 aa4.09□□□□□ -1.75
USP49-205ENST00000448078 PHYHIPQ92561 330 aa4.09□□□□□ -1.75
USP49-205ENST00000448078 TMEM56Q96MV1 263 aa4.09□□□□□ -1.75
USP49-205ENST00000448078 VGLL1Q99990 258 aa4.09□□□□□ -1.75
USP49-205ENST00000448078 PLGRKTQ9HBL7 147 aa4.09□□□□□ -1.75
USP49-205ENST00000448078 FKBP11Q9NYL4 201 aa4.09□□□□□ -1.75
USP49-205ENST00000448078 DNAH17Q9UFH2 4485 aa4.09□□□□□ -1.75
USP49-205ENST00000448078 DNAH6Q9C0G6 4158 aa4.09□□□□□ -1.76
USP49-205ENST00000448078 IGHV3OR16-8A0A075B7F1 116 aa4.08□□□□□ -1.76
USP49-205ENST00000448078 IGHV3-49A0A0A0MS15 119 aa4.08□□□□□ -1.76
USP49-205ENST00000448078 HELTA6NFD8 242 aa4.08□□□□□ -1.76
USP49-205ENST00000448078 J3QRK9 145 aa4.08□□□□□ -1.76
USP49-205ENST00000448078 SOCS1O15524 211 aa4.08□□□□□ -1.76
USP49-205ENST00000448078 GNG7O60262 68 aa4.08□□□□□ -1.76
USP49-205ENST00000448078 SERPINE2P07093 398 aa4.08□□□□□ -1.76
USP49-205ENST00000448078 LIMS3P0CW19 117 aa4.08□□□□□ -1.76
USP49-205ENST00000448078 LIMS4P0CW20 117 aa4.08□□□□□ -1.76
USP49-205ENST00000448078 NPBWR1P48145 328 aa4.08□□□□□ -1.76
USP49-205ENST00000448078 ERVK-16P61578 105 aa4.08□□□□□ -1.76
USP49-205ENST00000448078 DAD1P61803 113 aa4.08□□□□□ -1.76
USP49-205ENST00000448078 OR2B11Q5JQS5 317 aa4.08□□□□□ -1.76
USP49-205ENST00000448078 RBM48Q5RL73 367 aaKnown RBP4.08□□□□□ -1.76
USP49-205ENST00000448078 C1orf100Q5SVJ3 147 aa4.08□□□□□ -1.76
USP49-205ENST00000448078 FAAP20Q6NZ36 180 aa4.08□□□□□ -1.76
USP49-205ENST00000448078 KRTAP7-1Q8IUC3 87 aa4.08□□□□□ -1.76
USP49-205ENST00000448078 PUSL1Q8N0Z8 303 aaKnown RBP4.08□□□□□ -1.76
USP49-205ENST00000448078 FAM89BQ8N5H3 189 aa4.08□□□□□ -1.76
USP49-205ENST00000448078 GDPD1Q8N9F7 314 aa4.08□□□□□ -1.76
USP49-205ENST00000448078 STXBP6Q8NFX7 210 aa4.08□□□□□ -1.76
USP49-205ENST00000448078 RHOXF1Q8NHV9 184 aa4.08□□□□□ -1.76
USP49-205ENST00000448078 TMEM80Q96HE8 168 aa4.08□□□□□ -1.76
USP49-205ENST00000448078 DERL3Q96Q80 235 aa4.08□□□□□ -1.76
USP49-205ENST00000448078 C7orf50Q9BRJ6 194 aaKnown RBP4.08□□□□□ -1.76
USP49-205ENST00000448078 HINT2Q9BX68 163 aa4.08□□□□□ -1.76
USP49-205ENST00000448078 CCDC90BQ9GZT6 254 aa4.08□□□□□ -1.76
USP49-205ENST00000448078 MAGT1Q9H0U3 335 aa4.08□□□□□ -1.76
USP49-205ENST00000448078 FGF20Q9NP95 211 aaPredicted RBP4.08□□□□□ -1.76
USP49-205ENST00000448078 CLEC5AQ9NY25 188 aa4.08□□□□□ -1.76
USP49-205ENST00000448078 BET1LQ9NYM9 111 aa4.08□□□□□ -1.76
USP49-205ENST00000448078 XCL2Q9UBD3 114 aa4.08□□□□□ -1.76
USP49-205ENST00000448078 POMPQ9Y244 141 aa4.08□□□□□ -1.76
USP49-205ENST00000448078 RBMX2Q9Y388 322 aaKnown RBP4.08□□□□□ -1.76
USP49-205ENST00000448078 GOLT1BQ9Y3E0 138 aa4.08□□□□□ -1.76
USP49-205ENST00000448078 DYNC1H1Q14204 4646 aaKnown RBP4.07□□□□□ -1.76
USP49-205ENST00000448078 PKD1P98161 4303 aa4.07□□□□□ -1.76
USP49-205ENST00000448078 HSPG2P98160 4391 aa4.07□□□□□ -1.76
USP49-205ENST00000448078 IGHV3OR16-12A0A075B7B8 117 aa4.07□□□□□ -1.76
USP49-205ENST00000448078 IGHV3OR16-13A0A075B7E8 117 aa4.07□□□□□ -1.76
USP49-205ENST00000448078 IGHV3-74A0A0B4J1X5 117 aa4.07□□□□□ -1.76
USP49-205ENST00000448078 IGKV1-6A0A0C4DH72 117 aa4.07□□□□□ -1.76
USP49-205ENST00000448078 METTL21EPA6NDL7 271 aa4.07□□□□□ -1.76
USP49-205ENST00000448078 TMEM14DPA8MWL7 114 aa4.07□□□□□ -1.76
USP49-205ENST00000448078 HBE1P02100 147 aa4.07□□□□□ -1.76
USP49-205ENST00000448078 CTSGP08311 255 aa4.07□□□□□ -1.76
USP49-205ENST00000448078 NQO2P16083 231 aa4.07□□□□□ -1.76
USP49-205ENST00000448078 ETV1P50549 477 aa4.07□□□□□ -1.76
USP49-205ENST00000448078 TAS2R31P59538 309 aa4.07□□□□□ -1.76
USP49-205ENST00000448078 CATR1Q13166 79 aa4.07□□□□□ -1.76
USP49-205ENST00000448078 USF2Q15853 346 aaPredicted RBP4.07□□□□□ -1.76
USP49-205ENST00000448078 ZNF555Q8NEP9 628 aa4.07□□□□□ -1.76
USP49-205ENST00000448078 TSPAN14Q8NG11 270 aa4.07□□□□□ -1.76
USP49-205ENST00000448078 OR11H4Q8NGC9 324 aa4.07□□□□□ -1.76
USP49-205ENST00000448078 BORCS5Q969J3 196 aa4.07□□□□□ -1.76
USP49-205ENST00000448078 SLC25A46Q96AG3 418 aa4.07□□□□□ -1.76
USP49-205ENST00000448078 RAB3CQ96E17 227 aa4.07□□□□□ -1.76
USP49-205ENST00000448078 ARHGAP5-AS1Q96IT6 56 aa4.07□□□□□ -1.76
USP49-205ENST00000448078 OR10C1Q96KK4 312 aa4.07□□□□□ -1.76
USP49-205ENST00000448078 METTL26Q96S19 204 aa4.07□□□□□ -1.76
USP49-205ENST00000448078 RAB40CQ96S21 281 aa4.07□□□□□ -1.76
USP49-205ENST00000448078 HDHD3Q9BSH5 251 aaPredicted RBP4.07□□□□□ -1.76
USP49-205ENST00000448078 TMEM208Q9BTX3 173 aa4.07□□□□□ -1.76
USP49-205ENST00000448078 PECRQ9BY49 303 aa4.07□□□□□ -1.76
USP49-205ENST00000448078 Q9H8V8 135 aa4.07□□□□□ -1.76
USP49-205ENST00000448078 RAB22AQ9UL26 194 aa4.07□□□□□ -1.76
USP49-205ENST00000448078 SPATA2Q9UM82 520 aa4.07□□□□□ -1.76
USP49-205ENST00000448078 CELA1Q9UNI1 258 aa4.07□□□□□ -1.76
USP49-205ENST00000448078 FAT2Q9NYQ8 4349 aa4.07□□□□□ -1.76
USP49-205ENST00000448078 DNAH2Q9P225 4427 aa4.06□□□□□ -1.76
USP49-205ENST00000448078 A0A087X002 238 aa4.06□□□□□ -1.76
USP49-205ENST00000448078 A0A1W2PPQ1 181 aa4.06□□□□□ -1.76
USP49-205ENST00000448078 KNCNA6PVL3 124 aa4.06□□□□□ -1.76
USP49-205ENST00000448078 UPK2O00526 184 aa4.06□□□□□ -1.76
USP49-205ENST00000448078 DENRO43583 198 aaKnown RBP4.06□□□□□ -1.76
USP49-205ENST00000448078 HPRT1P00492 218 aa4.06□□□□□ -1.76
USP49-205ENST00000448078 HLA-DQB1P01920 261 aa4.06□□□□□ -1.76
USP49-205ENST00000448078 ZNF688P0C7X2 276 aa4.06□□□□□ -1.76
USP49-205ENST00000448078 ALDH3B2P48448 385 aa4.06□□□□□ -1.76
USP49-205ENST00000448078 PAX9P55771 341 aa4.06□□□□□ -1.76
USP49-205ENST00000448078 DHRS2Q13268 280 aa4.06□□□□□ -1.76
USP49-205ENST00000448078 ACSM3Q53FZ2 586 aa4.06□□□□□ -1.76
USP49-205ENST00000448078 HSD17B12Q53GQ0 312 aa4.06□□□□□ -1.76
USP49-205ENST00000448078 FAM222AQ5U5X8 452 aa4.06□□□□□ -1.76
USP49-205ENST00000448078 XAF1Q6GPH4 301 aa4.06□□□□□ -1.76
USP49-205ENST00000448078 ZNF773Q6PK81 442 aa4.06□□□□□ -1.76
USP49-205ENST00000448078 C19orf35Q6ZS72 473 aa4.06□□□□□ -1.76
USP49-205ENST00000448078 LRRTM1Q86UE6 522 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms