RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 hCG_1818297A0A087WSY0 165 aa2.55□□□□□ -2
HMGB1P48-201ENST00000446155 A0A087WUU8 490 aa2.55□□□□□ -2
HMGB1P48-201ENST00000446155 TMEM150BA6NC51 233 aa2.55□□□□□ -2
HMGB1P48-201ENST00000446155 A8MT66 165 aa2.55□□□□□ -2
HMGB1P48-201ENST00000446155 PPP5D1E7EU14 171 aa2.55□□□□□ -2
HMGB1P48-201ENST00000446155 NDUFB2O95178 105 aa2.55□□□□□ -2
HMGB1P48-201ENST00000446155 C8GP07360 202 aa2.55□□□□□ -2
HMGB1P48-201ENST00000446155 SRP19P09132 144 aaKnown RBP2.55□□□□□ -2
HMGB1P48-201ENST00000446155 SULT1A3P0DMM9 295 aa2.55□□□□□ -2
HMGB1P48-201ENST00000446155 SULT1A4P0DMN0 295 aa2.55□□□□□ -2
HMGB1P48-201ENST00000446155 CCL3P10147 92 aa2.55□□□□□ -2
HMGB1P48-201ENST00000446155 CBR1P16152 277 aa2.55□□□□□ -2
HMGB1P48-201ENST00000446155 KRTAP5-9P26371 169 aa2.55□□□□□ -2
HMGB1P48-201ENST00000446155 GABRA2P47869 451 aa2.55□□□□□ -2
HMGB1P48-201ENST00000446155 SERPINB10P48595 397 aa2.55□□□□□ -2
HMGB1P48-201ENST00000446155 RAB13P51153 203 aa2.55□□□□□ -2
HMGB1P48-201ENST00000446155 LINC00315P59091 139 aa2.55□□□□□ -2
HMGB1P48-201ENST00000446155 RPL30P62888 115 aaKnown RBP2.55□□□□□ -2
HMGB1P48-201ENST00000446155 TNFRSF9Q07011 255 aa2.55□□□□□ -2
HMGB1P48-201ENST00000446155 TSNQ15631 228 aaKnown RBP2.55□□□□□ -2
HMGB1P48-201ENST00000446155 DOPEY1Q5JWR5 2465 aa2.55□□□□□ -2
HMGB1P48-201ENST00000446155 WDR59Q6PJI9 974 aa2.55□□□□□ -2
HMGB1P48-201ENST00000446155 SDIM1Q6ZPB5 146 aa2.55□□□□□ -2
HMGB1P48-201ENST00000446155 TMEM136Q6ZRR5 245 aa2.55□□□□□ -2
HMGB1P48-201ENST00000446155 KRTAP5-5Q701N2 237 aaPredicted RBP2.55□□□□□ -2
HMGB1P48-201ENST00000446155 MRPL30Q8TCC3 161 aaKnown RBP2.55□□□□□ -2
HMGB1P48-201ENST00000446155 RASSF5Q8WWW0 418 aa2.55□□□□□ -2
HMGB1P48-201ENST00000446155 ACOT12Q8WYK0 555 aa2.55□□□□□ -2
HMGB1P48-201ENST00000446155 GINS3Q9BRX5 216 aa2.55□□□□□ -2
HMGB1P48-201ENST00000446155 MND1Q9BWT6 205 aa2.55□□□□□ -2
HMGB1P48-201ENST00000446155 CCDC90BQ9GZT6 254 aa2.55□□□□□ -2
HMGB1P48-201ENST00000446155 TMEM222Q9H0R3 208 aa2.55□□□□□ -2
HMGB1P48-201ENST00000446155 PARVBQ9HBI1 364 aa2.55□□□□□ -2
HMGB1P48-201ENST00000446155 SPTAN1Q13813 2472 aaKnown RBP2.54□□□□□ -2
HMGB1P48-201ENST00000446155 SCN9AQ15858 1988 aa2.54□□□□□ -2
HMGB1P48-201ENST00000446155 DOCK5Q9H7D0 1870 aa2.54□□□□□ -2
HMGB1P48-201ENST00000446155 PTPRJQ12913 1337 aa2.54□□□□□ -2
HMGB1P48-201ENST00000446155 TRAPPC13A5PLN9 417 aa2.54□□□□□ -2
HMGB1P48-201ENST00000446155 C19orf71A6NCJ1 209 aa2.54□□□□□ -2
HMGB1P48-201ENST00000446155 C17orf51A8MQB3 221 aa2.54□□□□□ -2
HMGB1P48-201ENST00000446155 OR11H12B2RN74 326 aa2.54□□□□□ -2
HMGB1P48-201ENST00000446155 I3L521 148 aa2.54□□□□□ -2
HMGB1P48-201ENST00000446155 HMGB3O15347 200 aaKnown RBP2.54□□□□□ -2
HMGB1P48-201ENST00000446155 LY6HO94772 140 aa2.54□□□□□ -2
HMGB1P48-201ENST00000446155 S1PR2O95136 353 aa2.54□□□□□ -2
HMGB1P48-201ENST00000446155 ZNF682O95780 498 aa2.54□□□□□ -2
HMGB1P48-201ENST00000446155 IFNA21P01568 189 aa2.54□□□□□ -2
HMGB1P48-201ENST00000446155 C1QBP02746 253 aa2.54□□□□□ -2
HMGB1P48-201ENST00000446155 CPMP14384 443 aa2.54□□□□□ -2
HMGB1P48-201ENST00000446155 IDO1P14902 403 aa2.54□□□□□ -2
HMGB1P48-201ENST00000446155 CRHBPP24387 322 aa2.54□□□□□ -2
HMGB1P48-201ENST00000446155 ERP29P30040 261 aaKnown RBP2.54□□□□□ -2
HMGB1P48-201ENST00000446155 SERPINB1P30740 379 aa2.54□□□□□ -2
HMGB1P48-201ENST00000446155 RPL27AP46776 148 aaKnown RBP2.54□□□□□ -2
HMGB1P48-201ENST00000446155 FOXA1P55317 472 aa2.54□□□□□ -2
HMGB1P48-201ENST00000446155 TCTAP57738 103 aa2.54□□□□□ -2
HMGB1P48-201ENST00000446155 TFAMQ00059 246 aaKnown RBP2.54□□□□□ -2
HMGB1P48-201ENST00000446155 IBA57Q5T440 356 aaKnown RBP2.54□□□□□ -2
HMGB1P48-201ENST00000446155 ZNF322Q6U7Q0 402 aaPredicted RBP2.54□□□□□ -2
HMGB1P48-201ENST00000446155 SSX8Q7RTT4 187 aa2.54□□□□□ -2
HMGB1P48-201ENST00000446155 C12orf45Q8N5I9 185 aaPredicted RBP2.54□□□□□ -2
HMGB1P48-201ENST00000446155 OR11H2Q8NH07 326 aa2.54□□□□□ -2
HMGB1P48-201ENST00000446155 MUC7Q8TAX7 377 aa2.54□□□□□ -2
HMGB1P48-201ENST00000446155 DDA1Q9BW61 102 aa2.54□□□□□ -2
HMGB1P48-201ENST00000446155 C20orf27Q9GZN8 174 aa2.54□□□□□ -2
HMGB1P48-201ENST00000446155 C11orf68Q9H3H3 251 aaKnown RBP2.54□□□□□ -2
HMGB1P48-201ENST00000446155 SMDT1Q9H4I9 107 aa2.54□□□□□ -2
HMGB1P48-201ENST00000446155 OTOGLQ3ZCN5 2332 aa2.54□□□□□ -2
HMGB1P48-201ENST00000446155 DSCAMO60469 2012 aa2.54□□□□□ -2
HMGB1P48-201ENST00000446155 LAMB2P55268 1798 aa2.54□□□□□ -2
HMGB1P48-201ENST00000446155 DDX60LQ5H9U9 1706 aaKnown RBP2.54□□□□□ -2
HMGB1P48-201ENST00000446155 FREM2Q5SZK8 3169 aa2.53□□□□□ -2
HMGB1P48-201ENST00000446155 COL12A1Q99715 3063 aa2.53□□□□□ -2
HMGB1P48-201ENST00000446155 ZNF638Q14966 1978 aaKnown RBP2.53□□□□□ -2
HMGB1P48-201ENST00000446155 IGKV2-28A0A075B6P5 120 aa2.53□□□□□ -2
HMGB1P48-201ENST00000446155 IGHV3-73A0A0B4J1V6 119 aa2.53□□□□□ -2
HMGB1P48-201ENST00000446155 LOC102725191A0A1B0GVB3 256 aa2.53□□□□□ -2
HMGB1P48-201ENST00000446155 TMEM269A0A1B0GVZ9 245 aa2.53□□□□□ -2
HMGB1P48-201ENST00000446155 GRIFINA4D1Z8 144 aa2.53□□□□□ -2
HMGB1P48-201ENST00000446155 IGKV2D-28P01615 120 aa2.53□□□□□ -2
HMGB1P48-201ENST00000446155 IGHV1-69P01742 117 aa2.53□□□□□ -2
HMGB1P48-201ENST00000446155 RBP1P09455 135 aa2.53□□□□□ -2
HMGB1P48-201ENST00000446155 IFI30P13284 250 aa2.53□□□□□ -2
HMGB1P48-201ENST00000446155 MSNP26038 577 aaKnown RBP2.53□□□□□ -2
HMGB1P48-201ENST00000446155 RBM11P57052 281 aaKnown RBP2.53□□□□□ -2
HMGB1P48-201ENST00000446155 HBA1P69905 142 aa2.53□□□□□ -2
HMGB1P48-201ENST00000446155 MOBPQ13875 183 aa2.53□□□□□ -2
HMGB1P48-201ENST00000446155 DNLZQ5SXM8 178 aa2.53□□□□□ -2
HMGB1P48-201ENST00000446155 GRINAQ7Z429 371 aa2.53□□□□□ -2
HMGB1P48-201ENST00000446155 HMGN2P46Q86SG4 172 aa2.53□□□□□ -2
HMGB1P48-201ENST00000446155 STX19Q8N4C7 294 aa2.53□□□□□ -2
HMGB1P48-201ENST00000446155 CNEP1R1Q8N9A8 125 aa2.53□□□□□ -2
HMGB1P48-201ENST00000446155 GPR119Q8TDV5 335 aa2.53□□□□□ -2
HMGB1P48-201ENST00000446155 C16orf95Q9H693 158 aa2.53□□□□□ -2
HMGB1P48-201ENST00000446155 EFCAB1Q9HAE3 211 aa2.53□□□□□ -2
HMGB1P48-201ENST00000446155 SS18L2Q9UHA2 77 aa2.53□□□□□ -2
HMGB1P48-201ENST00000446155 LAMA5O15230 3695 aa2.53□□□□□ -2
HMGB1P48-201ENST00000446155 LAMB1P07942 1786 aa2.53□□□□□ -2
HMGB1P48-201ENST00000446155 DOCK3Q8IZD9 2030 aa2.52□□□□□ -2.01
HMGB1P48-201ENST00000446155 MED23Q9ULK4 1368 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms